RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 PRCDQ00LT1 54 aa4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 DHRS2Q13268 280 aa4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 RNF212Q495C1 297 aa4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 PHLDA2Q53GA4 152 aa4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 FAM222AQ5U5X8 452 aa4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 SFXN4Q6P4A7 337 aa4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 H2BFWTQ7Z2G1 175 aa4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 TBC1D26Q86UD7 250 aa4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 TMEM230Q96A57 120 aa4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 FAM210BQ96KR6 192 aa4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 SDHCQ99643 169 aaPredicted RBP4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 NIPSNAP3BQ9BS92 247 aa4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 ATG101Q9BSB4 218 aa4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 ZNF2Q9BSG1 426 aaPredicted RBP4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 MIXL1Q9H2W2 232 aa4.24□□□□□ -1.73
SEMA3D-204ENST00000484038 LINC00854A0A1B0GVQ3 168 aa4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 GPR31O00270 319 aa4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 SCGB2A1O75556 95 aa4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 TMEM50AO95807 157 aa4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 PMP2P02689 132 aa4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 FGF9P31371 208 aaPredicted RBP4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 OPRK1P41145 380 aa4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 ETV6P41212 452 aa4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 FXYD7P58549 80 aa4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 SNRPD3P62318 126 aaKnown RBP4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 SPANXN2Q5MJ10 180 aa4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 ZNF705AQ6ZN79 300 aaPredicted RBP4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 IQCF2Q8IXL9 164 aa4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 C6orf223Q8N319 242 aa4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 SLC35G3Q8N808 338 aa4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 OR5H6Q8NGV6 325 aa4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 MRGPRFQ96AM1 343 aa4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 PPP1R14BQ96C90 147 aa4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 SLC25A38Q96DW6 304 aa4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 FXYD6Q9H0Q3 95 aa4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 V9GYH0 126 aa4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 HERC1Q15751 4861 aa4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 NACAE9PAV3 2078 aa4.23□□□□□ -1.73
SEMA3D-204ENST00000484038 IGLV5-52A0A0A0MRZ9 124 aa4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 TEX48A0A1B0GUV7 120 aa4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 SMIM9A6NGZ8 99 aa4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 ZNF705FA8MVS1 300 aaPredicted RBP4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 FAM90A26D6RGX4 464 aa4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 H3BMM0 161 aa4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 CORTO00230 105 aa4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 HPGDSO60760 199 aa4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 ZNF705DP0CH99 300 aaPredicted RBP4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 ZNF705BP0CI00 300 aaPredicted RBP4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 S100GP29377 79 aa4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 CBX5P45973 191 aa4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 ZNF79Q15937 498 aa4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 BAK1Q16611 211 aa4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 IDNKQ5T6J7 187 aa4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 SPATA12Q7Z6I5 190 aa4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 NEXN-AS1Q8NBZ9 246 aa4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 OR5H2Q8NGV7 314 aa4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 SEC22AQ96IW7 307 aa4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 AUNIPQ9H7T9 357 aa4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 MRPL36Q9P0J6 103 aaKnown RBP4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 COMMD3Q9UBI1 195 aa4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 RFNGQ9Y644 331 aa4.22□□□□□ -1.73
SEMA3D-204ENST00000484038 A0A0A6YYH2 397 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 NBDYA0A0U1RRE5 68 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 hDV102S1A0JD36 115 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 CBY3A6NI87 242 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 A6NJ64 397 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 CLN5O75503 358 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 IGKV1-39P01597 117 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 IGKV1D-39P04432 117 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 IL7P13232 177 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 HLA-DRB4P13762 266 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 HOXA1P49639 335 aaPredicted RBP4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 AP2S1P53680 142 aaPredicted RBP4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 SUB1P53999 127 aaKnown RBP eCLIP4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 TAS2R46P59540 309 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 DEFB1P60022 68 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 HSPE1P61604 102 aaKnown RBP4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 DAD1P61803 113 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 RPL36AP83881 106 aaKnown RBP4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 TIGITQ495A1 244 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 SERTAD4-AS1Q5TG53 156 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 C16orf54Q6UWD8 224 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 DHRS11Q6UWP2 260 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 OR6F1Q8NGZ6 308 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 DIRAS2Q96HU8 199 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 PDCD10Q9BUL8 212 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 CCDC32Q9BV29 185 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 SRRQ9GZT4 340 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 FNDC4Q9H6D8 234 aaPredicted RBP4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 NRN1Q9NPD7 142 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 DIABLOQ9NR28 239 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 YTHDF2Q9Y5A9 579 aaKnown RBP4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 HLA-DRB4X5D2U9 266 aa4.21□□□□□ -1.73
SEMA3D-204ENST00000484038 FABP12A6NFH5 140 aa4.21□□□□□ -1.74
SEMA3D-204ENST00000484038 PTTG1O95997 202 aa4.21□□□□□ -1.74
SEMA3D-204ENST00000484038 IGKV1-17P01599 117 aa4.21□□□□□ -1.74
SEMA3D-204ENST00000484038 HBE1P02100 147 aa4.21□□□□□ -1.74
SEMA3D-204ENST00000484038 APOA1P02647 267 aa4.21□□□□□ -1.74
SEMA3D-204ENST00000484038 IL4P05112 153 aa4.21□□□□□ -1.74
SEMA3D-204ENST00000484038 RNASE2P10153 161 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms