RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	TUSC5	Q8IXB3	177 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	LRRC75A-AS1	Q8N1F1	130 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	SMIM20	Q8N5G0	67 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520		Q8N7P7	452 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	OR10J6P	Q8NGY7	276 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	ARPC1A	Q92747	370 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	RPE	Q96AT9	228 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	DNAJC30	Q96LL9	226 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	CITED1	Q99966	193 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	CHRNA10	Q9GZZ6	450 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	PLEKHA3	Q9HB20	300 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	SIGLEC9	Q9Y336	463 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520		A0A087WX48	190 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	IGKV1D-13	A0A0B4J2D9	117 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	TRGV8	A0A0C4DH27	118 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	IGHV5-10-1	A0A0J9YXX1	117 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	SPAAR	A0A1B0GVQ0	90 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520		A0A1B0GWB2	263 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520		A0A1B0GX51	115 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520		A0A1W2PPI3	338 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	IGLL5	B9A064	214 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	TMEM150C	B9EJG8	249 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	CHEK1	O14757	476 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	SNCG	O76070	127 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	MT-CO3	P00414	261 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	IGKV1-39	P01597	117 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	IGLV2-8	P01709	118 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	STATH	P02808	62 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	IGKV1D-39	P04432	117 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	ATP5G1	P05496	136 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	ELANE	P08246	267 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	SCT	P09683	121 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	ZNF688	P0C7X2	276 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	IGKV1-13	P0DP09	117 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	PF4V1	P10720	104 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	EGR1	P18146	543 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	KIR2DS2	P43631	304 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	VDAC2	P45880	294 aa	Predicted RBP	3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	UQCRFS1	P47985	274 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	FOXA3	P55318	350 aa	Predicted RBP	3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	GFER	P55789	205 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	ATP5G2	Q06055	141 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	TFF3	Q07654	80 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	RIG	Q13278	110 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	HES1	Q14469	280 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	WFDC2	Q14508	124 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	EFNB3	Q15768	340 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	ETDB	Q3ZM63	59 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	TMEM78	Q5T7P6	136 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	FAM27B	Q5VT28	67 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	SPATA31B1P	Q5VZV4	182 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	ZNF841	Q6ZN19	808 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	RNF144B	Q7Z419	303 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	MOB3B	Q86TA1	216 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	MOGAT3	Q86VF5	341 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	TEN1	Q86WV5	123 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520		Q8IYB0	196 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	CEND1	Q8N111	149 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	OR13C6P	Q8NH95	151 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	PHLDA1	Q8WV24	401 aa	Predicted RBP	3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	RND1	Q92730	232 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	DLX4	Q92988	240 aa	Predicted RBP	3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	ST6GALNAC6	Q969X2	333 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	IGF2BP2-AS1	Q96M15	143 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	LINC01600	Q96MT4	127 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	HSD17B10	Q99714	261 aa	Known RBP	3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	NUDT22	Q9BRQ3	303 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	NXF5	Q9H1B4	397 aa	Known RBP	3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	IFI27L2	Q9H2X8	130 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	DLL3	Q9NYJ7	618 aa		3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	ERRFI1	Q9UJM3	462 aa	Predicted RBP	3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	LSM4	Q9Y4Z0	139 aa	Known RBP	3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	TPR	P12270	2363 aa	Known RBP	3.8	□□□□□ -1.8
PTCD3-212	ENST00000477520	IGLV3-32	A0A0A0MS00	114 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	IGKV1D-43	A0A0B4J1Z2	117 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	IGHV5-51	A0A0C4DH38	117 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	TRBV6-1	A0A0K0K1D8	114 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	TCRBV4S1A1T	A0A5B7	111 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	C15orf62	A8K5M9	175 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	HIGD1C	A8MV81	97 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	TNFSF12	O43508	249 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	PRKN	O60260	465 aa	Predicted RBP	3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	NDUFS7	O75251	213 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	PROP1	O75360	226 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	ATP5L	O75964	103 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	AGFG2	O95081	481 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	CLPS	P04118	112 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	IGKV3-11	P04433	115 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	C8orf88	P0DMB2	117 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	CRYGS	P22914	178 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	FCGR2B	P31994	310 aa	Predicted RBP	3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	NDUFV3	P56181	108 aa	Known RBP	3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	EDDM3B	P56851	147 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	CFHR1	Q03591	330 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	IL11RA	Q14626	422 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	PSG5	Q15238	335 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	RRN3P1	Q2M238	152 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	KRTAP27-1	Q3LI81	207 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	PIGY	Q3MUY2	71 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	HES3	Q5TGS1	186 aa		3.79	□□□□□ -1.8

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