RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 GNPNAT1Q96EK6 184 aaPredicted RBP3.89□□□□□ -1.79
NPHP3-206ENST00000474871 CHCHD5Q9BSY4 110 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 NMES1Q9C002 83 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 EIF5A2Q9GZV4 153 aaKnown RBP3.89□□□□□ -1.79
NPHP3-206ENST00000474871 SOX21Q9Y651 276 aaPredicted RBP3.89□□□□□ -1.79
NPHP3-206ENST00000474871 DPRXA6NFQ7 191 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 RRHO14718 337 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 LTBQ06643 244 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 OR5AS1Q8N127 324 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 KLHDC1Q8N7A1 406 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 NEXN-AS1Q8NBZ9 246 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 RFESDQ8TAC1 157 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 C17orf77Q96MU5 243 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 SEC16AO15027 2179 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 A0A0U1RQV1 116 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 A0A1B0GTH9 108 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 A0A1W2PNR3 127 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 TMEM30CPA0ZSE6 113 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 KIR3DS1Q14943 382 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 LRRC37A5PQ49AS3 106 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 PHLDA2Q53GA4 152 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 ZNF793Q6ZN11 406 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 ANKRD37Q7Z713 158 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 TPRX1Q8N7U7 411 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 ZNF331Q9NQX6 463 aaPredicted RBP3.88□□□□□ -1.79
NPHP3-206ENST00000474871 ACACAQ13085 2346 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 FOXS1O43638 330 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 CCL1P22362 96 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 CDAP32320 146 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 RSPO4Q2I0M5 234 aaPredicted RBP3.88□□□□□ -1.79
NPHP3-206ENST00000474871 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.88□□□□□ -1.79
NPHP3-206ENST00000474871 MOB3BQ86TA1 216 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 CSAG2Q9Y5P2 127 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 H3BMG7 143 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 DLX1P56177 255 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 HIST1H4AP62805 103 aaKnown RBP3.88□□□□□ -1.79
NPHP3-206ENST00000474871 CLEC12BQ2HXU8 276 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 PRSS41Q7RTY9 318 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 ZAR1Q86SH2 424 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 SFTPA2Q8IWL1 248 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 LRTM2Q8N967 370 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 NUP37Q8NFH4 326 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 Q96M85 177 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 NMNAT3Q96T66 252 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 OR2W1Q9Y3N9 320 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 SPAG17Q6Q759 2223 aa3.88□□□□□ -1.79
NPHP3-206ENST00000474871 ATP1B1P05026 303 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 PFN2P35080 140 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 BCDIN3DQ7Z5W3 292 aaKnown RBP3.87□□□□□ -1.79
NPHP3-206ENST00000474871 DLX4Q92988 240 aaPredicted RBP3.87□□□□□ -1.79
NPHP3-206ENST00000474871 URB1-AS1Q96HZ7 61 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 TRPM6Q9BX84 2022 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 SAP30LQ9HAJ7 183 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 CHCHD2Q9Y6H1 151 aaPredicted RBP3.87□□□□□ -1.79
NPHP3-206ENST00000474871 ARHGEF17Q96PE2 2063 aaPredicted RBP3.87□□□□□ -1.79
NPHP3-206ENST00000474871 PRUNE2Q8WUY3 3088 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 OVOL3O00110 214 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 IGHV3-7P01780 117 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 GYPBP06028 91 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 RPS4XP62701 263 aaKnown RBP3.87□□□□□ -1.79
NPHP3-206ENST00000474871 KLF17Q5JT82 389 aaPredicted RBP3.87□□□□□ -1.79
NPHP3-206ENST00000474871 CCL17Q92583 94 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 TMEM191AQ9H0A3 160 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 PARP12Q9H0J9 701 aaKnown RBP3.87□□□□□ -1.79
NPHP3-206ENST00000474871 ATRXP46100 2492 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 DOCK9Q9BZ29 2069 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 SPTBN2O15020 2390 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 IGHV5-51A0A0C4DH38 117 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 TRBV7-7A0A0K0K1E9 115 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 IGHA1P01876 353 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 OR9G9P0C7N8 305 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 VN1R4Q7Z5H5 301 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 CXXC4Q9H2H0 198 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 LCE2CQ5TA81 110 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 TREML4Q6UXN2 200 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 CIARTQ8N365 385 aaPredicted RBP3.87□□□□□ -1.79
NPHP3-206ENST00000474871 DYNLRB2Q8TF09 96 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 EMC6Q9BV81 110 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 C11orf1Q9H5F2 150 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 PILRAQ9UKJ1 303 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 TIMM8BQ9Y5J9 83 aaPredicted RBP3.87□□□□□ -1.79
NPHP3-206ENST00000474871 ARHGAP21Q5T5U3 1957 aa3.87□□□□□ -1.79
NPHP3-206ENST00000474871 RTTNQ86VV8 2226 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 LOXL3P58215 753 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 UBE2G1P62253 170 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 GNB1P62873 340 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 PMAIP1Q13794 54 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 LCN10Q6JVE6 187 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 SLC25A42Q86VD7 318 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 POLEQ07864 2286 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 IGHV5-10-1A0A0J9YXX1 117 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 A6NDN8 102 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 HMGN4O00479 90 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 FRMD6-AS1P0C7T7 363 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 PTHLHP12272 177 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 CD59P13987 128 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 HLA-DMBP28068 263 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 RPL18Q07020 188 aaKnown RBP3.86□□□□□ -1.79
NPHP3-206ENST00000474871 A0A1W2PQD3 144 aa3.86□□□□□ -1.79
NPHP3-206ENST00000474871 EPPINO95925 133 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms