RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 PTPRBP23467 1997 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 CUL7Q14999 1698 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 CFAP43Q8NDM7 1665 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 CR1P17927 2039 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 UHRF1BP1LA0JNW5 1464 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 KIF13BQ9NQT8 1826 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 RFX7Q2KHR2 1363 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 A0A087WX48 190 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 TRAV4A0A0B4J268 109 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 A0A1B0GV90 55 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 E7EQ34 232 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 DEGS1O15121 323 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 MRPS14O60783 128 aaKnown RBP1.13□□□□□ -2.23
HDAC6-212ENST00000461608 CRPP02741 224 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 DEFA4P12838 97 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 COX4I1P13073 169 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 RPS3P23396 243 aaKnown RBP eCLIP1.13□□□□□ -2.23
HDAC6-212ENST00000461608 CASP1P29466 404 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 PIGPP57054 158 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 YPEL3P61236 119 aaPredicted RBP1.13□□□□□ -2.23
HDAC6-212ENST00000461608 SMIM21Q3B7S5 101 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 SPANXN5Q5MJ07 72 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 Q6Q795 121 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 LCN15Q6UWW0 184 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 FP248Q71RG6 208 aaPredicted RBP1.13□□□□□ -2.23
HDAC6-212ENST00000461608 ANGPTL5Q86XS5 388 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 BPIFA4PQ86YQ2 179 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 STAG3L4Q8TBR4 150 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 GPR146Q96CH1 333 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 Q96M85 177 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 VPS25Q9BRG1 176 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 RASL12Q9NYN1 266 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 KIF21BO75037 1637 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 BIVM-ERCC5R4GMW8 1640 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 ABCC2Q92887 1545 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 SETD5Q9C0A6 1442 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 GREB1Q4ZG55 1949 aa1.13□□□□□ -2.23
HDAC6-212ENST00000461608 PTPRMP28827 1452 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 BCORL1Q5H9F3 1711 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 TONSLQ96HA7 1378 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 EPRSP07814 1512 aaKnown RBP1.12□□□□□ -2.23
HDAC6-212ENST00000461608 MAGI3Q5TCQ9 1506 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 TRBV6-5A0A0K0K1A5 114 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 DUXBA0A1W2PPF3 345 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 ODAMA1E959 279 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 IGKV2-29A2NJV5 120 aaPredicted RBP1.12□□□□□ -2.23
HDAC6-212ENST00000461608 CCDC160A6NGH7 325 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 ARL5CA6NH57 179 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 LINC00587B1AMM8 73 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 AIPO00170 330 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 PFDN1O60925 122 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 OR2J2O76002 312 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 IFNA7P01567 189 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 SHBGP04278 402 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 IL9P15248 144 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 GPX2P18283 190 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 NFYBP25208 207 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 CMPK1P30085 196 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 SDC4P31431 198 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 INSL3P51460 131 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 OR8B8Q15620 311 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 KISS1Q15726 138 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 LYRM7Q5U5X0 104 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 FKBP1CQ5VVH2 108 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 ZNF826PQ6ZT77 177 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 HIST3H2BBQ8N257 126 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 OR4E2Q8NGC2 313 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 OR9Q1Q8NGQ5 310 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 THEM6Q8WUY1 208 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 DNAJC9Q8WXX5 260 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 MALSU1Q96EH3 234 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 MRPL32Q9BYC8 188 aaKnown RBP1.12□□□□□ -2.23
HDAC6-212ENST00000461608 KRTAP4-1Q9BYQ7 146 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 HSPB8Q9UJY1 196 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 PTPRGP23470 1445 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 FN1P02751 2386 aaKnown RBP1.12□□□□□ -2.23
HDAC6-212ENST00000461608 CCDC171Q6TFL3 1326 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 IQSEC2Q5JU85 1478 aa1.12□□□□□ -2.23
HDAC6-212ENST00000461608 ZCCHC11Q5TAX3 1644 aaKnown RBP1.11□□□□□ -2.23
HDAC6-212ENST00000461608 MADDQ8WXG6 1647 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 STRCQ7RTU9 1775 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 RTTNQ86VV8 2226 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 RIMS1Q86UR5 1692 aaKnown RBP1.11□□□□□ -2.23
HDAC6-212ENST00000461608 PREX1Q8TCU6 1659 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 TRBV19A0A075B6N1 114 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 A0A1B0GW64 132 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 TMEM189A5PLL7 270 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 EFCAB10A6NFE3 127 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 BUB1B-PAK6H3BSN5 160 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 H7BYZ3 331 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 J3KT08 172 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 OR2T1O43869 369 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 APOA2P02652 100 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 PRB1P04280 392 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 ARL14EPLP0DKL9 152 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 S100A11P31949 105 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 SRP9P49458 86 aaKnown RBP1.11□□□□□ -2.23
HDAC6-212ENST00000461608 POLR2HP52434 150 aaKnown RBP1.11□□□□□ -2.23
HDAC6-212ENST00000461608 CDC42P60953 191 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 HIST1H1AQ02539 215 aaPredicted RBP1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms