RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 OR1N2Q8NGR9 330 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 OR5H6Q8NGV6 325 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 CLDND2Q8NHS1 167 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 RTBDNQ9BSG5 229 aaPredicted RBP4.68□□□□□ -1.66
MCF2-206ENST00000446225 RTL8AQ9BWD3 113 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 SH3BGRL3Q9H299 93 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 OR51I2Q9H344 312 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 Q9H521 79 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 RNF7Q9UBF6 113 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 ZANQ9Y493 2812 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 TRAV8-4A0A0B4J246 113 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 IGKV1-9A0A0C4DH69 117 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 PNMA8CA0A1B0GUJ8 204 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 TMEM212A6NML5 194 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 MYL12BO14950 172 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 MOSP00540 346 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 LHBP01229 141 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 P01737 135 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 IGHV3-48P01763 117 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 ATF1P18846 271 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 CDK2P24941 298 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 PSMB9P28065 219 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 CACNG7P62955 275 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 ZNF181Q2M3W8 571 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 C2orf66Q6UXQ4 117 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 BAP18Q8IXM2 172 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 RPS4Y2Q8TD47 263 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 SLIRPQ9GZT3 109 aaKnown RBP4.68□□□□□ -1.66
MCF2-206ENST00000446225 LSM2Q9Y333 95 aaKnown RBP4.68□□□□□ -1.66
MCF2-206ENST00000446225 MTORP42345 2549 aa4.67□□□□□ -1.66
MCF2-206ENST00000446225 CHD3Q12873 2000 aaKnown RBP4.67□□□□□ -1.66
MCF2-206ENST00000446225 IGKV1-27A0A075B6S5 117 aa4.67□□□□□ -1.66
MCF2-206ENST00000446225 IGHV3OR15-7A0A075B7D8 119 aa4.67□□□□□ -1.66
MCF2-206ENST00000446225 YIF1AO95070 293 aa4.67□□□□□ -1.66
MCF2-206ENST00000446225 RPS11P62280 158 aaKnown RBP eCLIP4.67□□□□□ -1.66
MCF2-206ENST00000446225 PPP3R1P63098 170 aa4.67□□□□□ -1.66
MCF2-206ENST00000446225 GNG5P63218 68 aa4.67□□□□□ -1.66
MCF2-206ENST00000446225 LYPD2Q6UXB3 125 aa4.67□□□□□ -1.66
MCF2-206ENST00000446225 TEX43Q6ZNM6 134 aa4.67□□□□□ -1.66
MCF2-206ENST00000446225 LINC00173Q6ZV60 143 aa4.67□□□□□ -1.66
MCF2-206ENST00000446225 PDZD9Q8IXQ8 264 aa4.67□□□□□ -1.66
MCF2-206ENST00000446225 OR1S1Q8NH92 325 aa4.67□□□□□ -1.66
MCF2-206ENST00000446225 SRSF12Q8WXF0 261 aaKnown RBP4.67□□□□□ -1.66
MCF2-206ENST00000446225 AQP3Q92482 292 aa4.67□□□□□ -1.66
MCF2-206ENST00000446225 PTX4Q96A99 478 aa4.67□□□□□ -1.66
MCF2-206ENST00000446225 ACY3Q96HD9 319 aa4.67□□□□□ -1.66
MCF2-206ENST00000446225 FAM19A4Q96LR4 140 aa4.67□□□□□ -1.66
MCF2-206ENST00000446225 Q9H3A6 140 aa4.67□□□□□ -1.66
MCF2-206ENST00000446225 MRPL27Q9P0M9 148 aaKnown RBP4.67□□□□□ -1.66
MCF2-206ENST00000446225 PKIGQ9Y2B9 76 aa4.67□□□□□ -1.66
MCF2-206ENST00000446225 DYSFO75923 2080 aa4.67□□□□□ -1.66
MCF2-206ENST00000446225 IGHV3-35A0A0C4DH35 117 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 A0A1B0GX51 115 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 LINC01619G3V211 115 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 CDRT1O95170 752 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 TFF1P04155 84 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 RCC1P18754 421 aaPredicted RBP4.66□□□□□ -1.66
MCF2-206ENST00000446225 THBS3P49746 956 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 REG3AQ06141 175 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 PMAIP1Q13794 54 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 IAH1Q2TAA2 248 aaPredicted RBP4.66□□□□□ -1.66
MCF2-206ENST00000446225 TMEM155Q4W5P6 130 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 GOLT1AQ6ZVE7 132 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 TMEM61Q8N0U2 210 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 PP6455Q8WZ26 134 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 HEXA-AS1Q9H8Q6 139 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 VAX2Q9UIW0 290 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 TLN2Q9Y4G6 2542 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 A0A1B0GV50 99 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 CD5LO43866 347 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 IGLV2-11P01706 119 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 GYPAP02724 150 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 CXCL6P80162 114 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 ARFRP1Q13795 201 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 INSL4Q14641 139 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 ZNF404Q494X3 552 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 OR5D14Q8NGL3 314 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 TERB2Q8NHR7 220 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 GPR82Q96P67 336 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 SPACA5Q96QH8 159 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 CCL13Q99616 98 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 RNASE7Q9H1E1 156 aaKnown RBP4.66□□□□□ -1.66
MCF2-206ENST00000446225 MMP26Q9NRE1 261 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 TAS2R4Q9NYW5 299 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 ZFP30Q9Y2G7 519 aa4.66□□□□□ -1.66
MCF2-206ENST00000446225 ABCA1O95477 2261 aa4.65□□□□□ -1.66
MCF2-206ENST00000446225 CR1P17927 2039 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 TRAV38-1A0A0B4J264 116 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 TEX50A0A1B0GTY4 177 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 SRRM5B3KS81 715 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 J3KT08 172 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 J3QT63 122 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 PIN1P1O15428 100 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 UPK1BO75841 260 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 FSTL3O95633 263 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 SLPIP03973 132 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 CXCL3P19876 107 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 RAB3BP20337 219 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 CTRLP40313 264 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 GABARAPL2P60520 117 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms