RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 HIST1H2BHQ93079 126 aa20.18■□□□□ 0.82
CPNE1-216ENST00000437340 HIST1H2BNQ99877 126 aa20.18■□□□□ 0.82
CPNE1-216ENST00000437340 HIST1H2BMQ99879 126 aa20.18■□□□□ 0.82
CPNE1-216ENST00000437340 MEGF9Q9H1U4 602 aa20.18■□□□□ 0.82
CPNE1-216ENST00000437340 WI2-2373I1.2A0A1W2PRP0 233 aa20.18■□□□□ 0.82
CPNE1-216ENST00000437340 SCGB2A1O75556 95 aa20.18■□□□□ 0.82
CPNE1-216ENST00000437340 MSMBP08118 114 aa20.18■□□□□ 0.82
CPNE1-216ENST00000437340 RNF125Q96EQ8 232 aa20.18■□□□□ 0.82
CPNE1-216ENST00000437340 TXN2Q99757 166 aa20.18■□□□□ 0.82
CPNE1-216ENST00000437340 NDUFB8O95169 186 aa20.17■□□□□ 0.82
CPNE1-216ENST00000437340 GCGP01275 180 aa20.17■□□□□ 0.82
CPNE1-216ENST00000437340 RANP62826 216 aaKnown RBP20.17■□□□□ 0.82
CPNE1-216ENST00000437340 FRZBQ92765 325 aa20.17■□□□□ 0.82
CPNE1-216ENST00000437340 SHANK2-AS3Q9BTD1 123 aa20.17■□□□□ 0.82
CPNE1-216ENST00000437340 TRAV9-1A0A075B6T8 112 aa20.16■□□□□ 0.82
CPNE1-216ENST00000437340 TRAV40A0A0B4J280 105 aa20.16■□□□□ 0.82
CPNE1-216ENST00000437340 F8W735 103 aaPredicted RBP20.16■□□□□ 0.82
CPNE1-216ENST00000437340 IGLV2-8P01709 118 aa20.16■□□□□ 0.82
CPNE1-216ENST00000437340 SLC25A16P16260 332 aa20.16■□□□□ 0.82
CPNE1-216ENST00000437340 ZNF600Q6ZNG1 722 aa20.16■□□□□ 0.82
CPNE1-216ENST00000437340 BLNKQ8WV28 456 aa20.16■□□□□ 0.82
CPNE1-216ENST00000437340 EPDR1Q9UM22 224 aa20.16■□□□□ 0.82
CPNE1-216ENST00000437340 RNF24Q9Y225 148 aa20.16■□□□□ 0.82
CPNE1-216ENST00000437340 H3BRN7 92 aa20.16■□□□□ 0.82
CPNE1-216ENST00000437340 OR2J3O76001 311 aa20.16■□□□□ 0.82
CPNE1-216ENST00000437340 HIST1H1EP10412 219 aaKnown RBP20.16■□□□□ 0.82
CPNE1-216ENST00000437340 Q56UQ5 140 aa20.16■□□□□ 0.82
CPNE1-216ENST00000437340 LEMD1Q68G75 181 aa20.16■□□□□ 0.82
CPNE1-216ENST00000437340 LINC00518Q8N0U6 118 aa20.16■□□□□ 0.82
CPNE1-216ENST00000437340 C5orf56Q8N8D9 126 aa20.16■□□□□ 0.82
CPNE1-216ENST00000437340 VN1R17PQ8TDU5 208 aa20.16■□□□□ 0.82
CPNE1-216ENST00000437340 OSTCQ9NRP0 149 aa20.16■□□□□ 0.82
CPNE1-216ENST00000437340 IL36BQ9NZH7 164 aa20.16■□□□□ 0.82
CPNE1-216ENST00000437340 APCP25054 2843 aa20.16■□□□□ 0.82
CPNE1-216ENST00000437340 TRGC1P0CF51 173 aa20.15■□□□□ 0.82
CPNE1-216ENST00000437340 ERVFC1-1P60608 527 aa20.15■□□□□ 0.82
CPNE1-216ENST00000437340 UNQ5815/PRO19632Q6UWF5 114 aa20.15■□□□□ 0.82
CPNE1-216ENST00000437340 TMUB1Q9BVT8 246 aa20.15■□□□□ 0.82
CPNE1-216ENST00000437340 PGPA6NDG6 321 aa20.14■□□□□ 0.81
CPNE1-216ENST00000437340 B4DSR2 109 aa20.14■□□□□ 0.81
CPNE1-216ENST00000437340 ATP6V0E1O15342 81 aa20.14■□□□□ 0.81
CPNE1-216ENST00000437340 IL4P05112 153 aa20.14■□□□□ 0.81
CPNE1-216ENST00000437340 CLEC12BQ2HXU8 276 aa20.14■□□□□ 0.81
CPNE1-216ENST00000437340 C5orf17Q8NAS9 161 aa20.14■□□□□ 0.81
CPNE1-216ENST00000437340 FBXL7Q9UJT9 491 aa20.14■□□□□ 0.81
CPNE1-216ENST00000437340 MOB4Q9Y3A3 225 aa20.14■□□□□ 0.81
CPNE1-216ENST00000437340 ISLRO14498 428 aa20.13■□□□□ 0.81
CPNE1-216ENST00000437340 SLC25A5P05141 298 aaKnown RBP20.13■□□□□ 0.81
CPNE1-216ENST00000437340 HOXA5P20719 270 aa20.13■□□□□ 0.81
CPNE1-216ENST00000437340 BPIFA4PQ86YQ2 179 aa20.13■□□□□ 0.81
CPNE1-216ENST00000437340 GATA3P23771 443 aa20.13■□□□□ 0.81
CPNE1-216ENST00000437340 OR5I1Q13606 314 aa20.13■□□□□ 0.81
CPNE1-216ENST00000437340 C7orf69Q9H7B7 122 aa20.13■□□□□ 0.81
CPNE1-216ENST00000437340 BEX4Q9NWD9 120 aaPredicted RBP20.13■□□□□ 0.81
CPNE1-216ENST00000437340 KLF12Q9Y4X4 402 aa20.13■□□□□ 0.81
CPNE1-216ENST00000437340 S4R3C0 116 aa20.13■□□□□ 0.81
CPNE1-216ENST00000437340 V9GYV3 84 aa20.13■□□□□ 0.81
CPNE1-216ENST00000437340 IGHV3OR16-10A0A075B7F0 116 aa20.12■□□□□ 0.81
CPNE1-216ENST00000437340 S100A8P05109 93 aa20.12■□□□□ 0.81
CPNE1-216ENST00000437340 S100A9P06702 114 aaKnown RBP20.12■□□□□ 0.81
CPNE1-216ENST00000437340 NDUFA6P56556 154 aa20.12■□□□□ 0.81
CPNE1-216ENST00000437340 TMEM183BQ1AE95 376 aa20.12■□□□□ 0.81
CPNE1-216ENST00000437340 DEFB113Q30KQ7 82 aa20.12■□□□□ 0.81
CPNE1-216ENST00000437340 PIFOQ8TCI5 191 aa20.12■□□□□ 0.81
CPNE1-216ENST00000437340 Q9H3A6 140 aa20.12■□□□□ 0.81
CPNE1-216ENST00000437340 OTORQ9NRC9 128 aa20.12■□□□□ 0.81
CPNE1-216ENST00000437340 A0A0U1RQK1 487 aa20.11■□□□□ 0.81
CPNE1-216ENST00000437340 ECSCRQ19T08 205 aa20.11■□□□□ 0.81
CPNE1-216ENST00000437340 BRD3OSQ6XYD6 125 aa20.11■□□□□ 0.81
CPNE1-216ENST00000437340 SMIM12Q96EX1 92 aa20.11■□□□□ 0.81
CPNE1-216ENST00000437340 ATG101Q9BSB4 218 aa20.11■□□□□ 0.81
CPNE1-216ENST00000437340 TRBV9A0A0B4J1U6 114 aa20.11■□□□□ 0.81
CPNE1-216ENST00000437340 TRAV20A0A0B4J274 112 aa20.11■□□□□ 0.81
CPNE1-216ENST00000437340 ZNF320A2RRD8 509 aa20.11■□□□□ 0.81
CPNE1-216ENST00000437340 SNRPCP09234 159 aaKnown RBP20.11■□□□□ 0.81
CPNE1-216ENST00000437340 IGHV4-38-2P0DP08 117 aa20.11■□□□□ 0.81
CPNE1-216ENST00000437340 LINC00479Q96M42 142 aa20.11■□□□□ 0.81
CPNE1-216ENST00000437340 ZNF586Q9NXT0 402 aa20.11■□□□□ 0.81
CPNE1-216ENST00000437340 ACTL10Q5JWF8 245 aa20.1■□□□□ 0.81
CPNE1-216ENST00000437340 BAGE2Q86Y30 109 aa20.1■□□□□ 0.81
CPNE1-216ENST00000437340 OR4F17Q8NGA8 305 aa20.1■□□□□ 0.81
CPNE1-216ENST00000437340 SLC17A3O00476 420 aa20.09■□□□□ 0.81
CPNE1-216ENST00000437340 USF2Q15853 346 aaPredicted RBP20.09■□□□□ 0.81
CPNE1-216ENST00000437340 RPEL1Q2QD12 228 aa20.09■□□□□ 0.81
CPNE1-216ENST00000437340 HIF1ANQ9NWT6 349 aa20.09■□□□□ 0.81
CPNE1-216ENST00000437340 CTSGP08311 255 aa20.08■□□□□ 0.81
CPNE1-216ENST00000437340 MGST1P10620 155 aaKnown RBP20.08■□□□□ 0.81
CPNE1-216ENST00000437340 CDX1P47902 265 aaPredicted RBP20.08■□□□□ 0.81
CPNE1-216ENST00000437340 CRIP2P52943 208 aaPredicted RBP20.08■□□□□ 0.81
CPNE1-216ENST00000437340 UBE2G1P62253 170 aa20.08■□□□□ 0.81
CPNE1-216ENST00000437340 GNG5P63218 68 aa20.08■□□□□ 0.81
CPNE1-216ENST00000437340 ZNF98A6NK75 572 aa20.08■□□□□ 0.8
CPNE1-216ENST00000437340 IGLC2P0DOY2 106 aa20.08■□□□□ 0.8
CPNE1-216ENST00000437340 IBA57Q5T440 356 aaKnown RBP20.08■□□□□ 0.8
CPNE1-216ENST00000437340 FAM231DQ6ZW35 169 aa20.08■□□□□ 0.8
CPNE1-216ENST00000437340 LYPD1Q8N2G4 141 aa20.08■□□□□ 0.8
CPNE1-216ENST00000437340 ZNF502Q8TBZ5 544 aa20.08■□□□□ 0.8
CPNE1-216ENST00000437340 GAR1Q9NY12 217 aaKnown RBP20.08■□□□□ 0.8
CPNE1-216ENST00000437340 OR2T8A6NH00 312 aa20.07■□□□□ 0.8
CPNE1-216ENST00000437340 C15orf32Q32M92 178 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms