RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 EFCAB11Q9BUY7 163 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 C6orf62Q9GZU0 229 aaPredicted RBP1.1□□□□□ -2.23
PTPN4-205ENST00000433888 TMEM126AQ9H061 195 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 OTORQ9NRC9 128 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 SMPXQ9UHP9 88 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 ASB4Q9Y574 426 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 ANAPC1Q9H1A4 1944 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 MYH10P35580 1976 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 EML6Q6ZMW3 1958 aa1.1□□□□□ -2.23
PTPN4-205ENST00000433888 ANKRD30AQ9BXX3 1397 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 HEATR5BQ9P2D3 2071 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 UHRF1BP1Q6BDS2 1440 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 TRBV6-5A0A0K0K1A5 114 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 H7BYZ3 331 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 APOA2P02652 100 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 CD2P06729 351 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 GPX1P07203 203 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 SURF2Q15527 256 aaPredicted RBP1.09□□□□□ -2.23
PTPN4-205ENST00000433888 TMEM78Q5T7P6 136 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 EIF5AL1Q6IS14 154 aaKnown RBP1.09□□□□□ -2.23
PTPN4-205ENST00000433888 ZNF826PQ6ZT77 177 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 TCF24Q7RTU0 167 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 CROCCP2Q86T23 111 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 IFT20Q8IY31 132 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 LINC00311Q8N616 119 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 TEX29Q8N6K0 151 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.09□□□□□ -2.23
PTPN4-205ENST00000433888 LINC00301Q8NCQ3 95 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 OR2T10Q8NGZ9 312 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 MALSU1Q96EH3 234 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 ADAT1Q9BUB4 502 aaKnown RBP1.09□□□□□ -2.23
PTPN4-205ENST00000433888 YIPF3Q9GZM5 350 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 POPDC3Q9HBV1 291 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 TAS2R4Q9NYW5 299 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 TAF1LQ8IZX4 1826 aa1.09□□□□□ -2.23
PTPN4-205ENST00000433888 CEP164Q9UPV0 1460 aa1.09□□□□□ -2.24
PTPN4-205ENST00000433888 STRCQ7RTU9 1775 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 RP1P56715 2156 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 PRRC2BQ5JSZ5 2229 aaKnown RBP1.08□□□□□ -2.24
PTPN4-205ENST00000433888 LOC105371267A0A1B0GV96 52 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 C2orf70A6NJV1 201 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 UBL3O95164 117 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 ZNF705BP0CI00 300 aaPredicted RBP1.08□□□□□ -2.24
PTPN4-205ENST00000433888 FABP2P12104 132 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 S100A11P31949 105 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 CDK5R1Q15078 307 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 ELOBQ15370 118 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 RTL8BQ17RB0 113 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 SCGB2B2Q4G0G5 96 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 TMEM128Q5BJH2 165 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 C22orf39Q6P5X5 142 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 TEX47Q8TBZ9 253 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 PLEKHB2Q96CS7 222 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 RTL8AQ9BWD3 113 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 REG4Q9BYZ8 158 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 PBOV1Q9GZY1 135 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 CENPHQ9H3R5 247 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 NIT2Q9NQR4 276 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 TMEM106BQ9NUM4 274 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 FREM1Q5H8C1 2179 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 ICE1Q9Y2F5 2266 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 NUP98P52948 1817 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 ROCK1Q13464 1354 aa1.08□□□□□ -2.24
PTPN4-205ENST00000433888 TECPR2O15040 1411 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 CEP192Q8TEP8 1941 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 TRGV2A0A075B6R0 118 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 MEIKINA0A087WXM9 373 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 IGKV2D-26A0A0A0MRZ7 120 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 TRGV10A0A0A0MS01 117 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 TLCD2A6NGC4 264 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 GABARAPH6UMI1 98 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 LYZL6O75951 148 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 IFNA14P01570 189 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 COX6A1P12074 109 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 HLA-EP13747 358 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 AKR1C3P42330 323 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 C1orf134Q5TEV5 83 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 C1orf140Q5VVS0 124 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 SAMD13Q5VXD3 122 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 OR4D11Q8NGI4 311 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 CHCHD1Q96BP2 118 aaKnown RBP1.07□□□□□ -2.24
PTPN4-205ENST00000433888 TEX37Q96LM6 180 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 RETNLBQ9BQ08 111 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 TMEM70Q9BUB7 260 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 CCDC32Q9BV29 185 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 GGACTQ9BVM4 153 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 TAF9BQ9HBM6 251 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 NAT8BQ9UHF3 227 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 FN1P02751 2386 aaKnown RBP1.07□□□□□ -2.24
PTPN4-205ENST00000433888 MGAMO43451 1857 aa1.07□□□□□ -2.24
PTPN4-205ENST00000433888 RIC1Q4ADV7 1423 aa1.06□□□□□ -2.24
PTPN4-205ENST00000433888 SCN3AQ9NY46 2000 aa1.06□□□□□ -2.24
PTPN4-205ENST00000433888 MDC1Q14676 2089 aaKnown RBP1.06□□□□□ -2.24
PTPN4-205ENST00000433888 DOCK10Q96BY6 2186 aa1.06□□□□□ -2.24
PTPN4-205ENST00000433888 NUP210Q8TEM1 1887 aaPredicted RBP1.06□□□□□ -2.24
PTPN4-205ENST00000433888 C7orf71A4D174 169 aa1.06□□□□□ -2.24
PTPN4-205ENST00000433888 TSTD3H0UI37 97 aa1.06□□□□□ -2.24
PTPN4-205ENST00000433888 RER1O15258 196 aa1.06□□□□□ -2.24
PTPN4-205ENST00000433888 MT-ND6P03923 174 aa1.06□□□□□ -2.24
PTPN4-205ENST00000433888 RPS3P23396 243 aaKnown RBP eCLIP1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms