RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 CCL19Q99731 98 aa6.21□□□□□ -1.41
CNKSR3-202ENST00000433165 GTSF1LQ9H1H1 148 aa6.21□□□□□ -1.41
CNKSR3-202ENST00000433165 RABAC1Q9UI14 185 aa6.21□□□□□ -1.41
CNKSR3-202ENST00000433165 TEX48A0A1B0GUV7 120 aa6.21□□□□□ -1.42
CNKSR3-202ENST00000433165 DEFB108AA8MXU0 73 aa6.21□□□□□ -1.42
CNKSR3-202ENST00000433165 SIVA1O15304 175 aa6.21□□□□□ -1.42
CNKSR3-202ENST00000433165 PSPNO60542 156 aa6.21□□□□□ -1.42
CNKSR3-202ENST00000433165 FCGR3BO75015 233 aa6.21□□□□□ -1.42
CNKSR3-202ENST00000433165 C8orf88P0DMB2 117 aa6.21□□□□□ -1.42
CNKSR3-202ENST00000433165 FOXA3P55318 350 aaPredicted RBP6.21□□□□□ -1.42
CNKSR3-202ENST00000433165 SMAGPQ0VAQ4 97 aa6.21□□□□□ -1.42
CNKSR3-202ENST00000433165 TCTEX1D4Q5JR98 221 aa6.21□□□□□ -1.42
CNKSR3-202ENST00000433165 Q5PR19 223 aa6.21□□□□□ -1.42
CNKSR3-202ENST00000433165 ASPHD1Q5U4P2 390 aa6.21□□□□□ -1.42
CNKSR3-202ENST00000433165 C9orf135Q5VTT2 229 aa6.21□□□□□ -1.42
CNKSR3-202ENST00000433165 BOD1L2Q8IYS8 172 aa6.21□□□□□ -1.42
CNKSR3-202ENST00000433165 OR10W1Q8NGF6 305 aa6.21□□□□□ -1.42
CNKSR3-202ENST00000433165 OR9G4Q8NGQ1 327 aa6.21□□□□□ -1.42
CNKSR3-202ENST00000433165 SLC25A33Q9BSK2 321 aa6.21□□□□□ -1.42
CNKSR3-202ENST00000433165 RTL8AQ9BWD3 113 aa6.21□□□□□ -1.42
CNKSR3-202ENST00000433165 CACNA1DQ01668 2161 aa6.21□□□□□ -1.42
CNKSR3-202ENST00000433165 TRAV3A0A0B4J244 114 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 C15orf61A6NNL5 157 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 PROP1O75360 226 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 IGHV3-9P01782 118 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 ERVK-16P61578 105 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 CD300EQ496F6 205 aaPredicted RBP6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 CT83Q5H943 113 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 TRAT1Q6PIZ9 186 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 FOXI2Q6ZQN5 318 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 COQ2Q96H96 371 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 FAM167A-AS1Q96KT0 104 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 LINC00479Q96M42 142 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 SPATA25Q9BR10 227 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 MCRIP2Q9BUT9 160 aaKnown RBP6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 MRPL32Q9BYC8 188 aaKnown RBP6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 UBTD1Q9HAC8 227 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 A0A096LPE4 126 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 A0A1W2PPZ6 126 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 PEX7O00628 323 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 MEF2CQ06413 473 aaPredicted RBP6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 C3orf36Q3SXR2 165 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 ADAMTSL5Q6ZMM2 481 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 PERPQ96FX8 193 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 TMEM140Q9NV12 185 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 ZNF257Q9Y2Q1 563 aa6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 AMMECR1Q9Y4X0 333 aaPredicted RBP6.2□□□□□ -1.42
CNKSR3-202ENST00000433165 IGKV1OR2-108A0A075B7D4 117 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 GAGE12HA6NDE8 117 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 SNAI2O43623 268 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 FABP2P12104 132 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 FA2HQ7L5A8 372 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 OR4X2Q8NGF9 303 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 NEU4Q8WWR8 484 aaPredicted RBP6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 ADTRPQ96IZ2 230 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 NAA38Q9BRA0 125 aaKnown RBP6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 ZNF747Q9BV97 191 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 PRSS22Q9GZN4 317 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 THYN1Q9P016 225 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 FOXA2Q9Y261 457 aaPredicted RBP6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 SELENOKQ9Y6D0 94 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 SPENQ96T58 3664 aaKnown RBP6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 INTS1Q8N201 2190 aaKnown RBP6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 A8MWL6 223 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 VSTM5A8MXK1 200 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 SMAD7O15105 426 aaKnown RBP6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 THBDP07204 575 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 CD24P25063 80 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 CEBPDP49716 269 aaPredicted RBP6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 RAB9AP51151 201 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 AESQ08117 197 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 ZNF329Q86UD4 541 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 VKORC1L1Q8N0U8 176 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 ZNF48Q96MX3 618 aaPredicted RBP6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 SLC25A2Q9BXI2 301 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 GFRA4Q9GZZ7 299 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 TMEM14BQ9NUH8 114 aa6.19□□□□□ -1.42
CNKSR3-202ENST00000433165 IGHV3-43A0A0B4J1X8 118 aa6.18□□□□□ -1.42
CNKSR3-202ENST00000433165 SRRM4A7MD48 611 aaKnown RBP6.18□□□□□ -1.42
CNKSR3-202ENST00000433165 MGST3O14880 152 aa6.18□□□□□ -1.42
CNKSR3-202ENST00000433165 ADH4P08319 380 aa6.18□□□□□ -1.42
CNKSR3-202ENST00000433165 IGHV3-43DP0DP04 118 aa6.18□□□□□ -1.42
CNKSR3-202ENST00000433165 IGHV1-2P23083 117 aa6.18□□□□□ -1.42
CNKSR3-202ENST00000433165 KIR2DS2P43631 304 aa6.18□□□□□ -1.42
CNKSR3-202ENST00000433165 GPR12P47775 334 aa6.18□□□□□ -1.42
CNKSR3-202ENST00000433165 FOXG1P55316 489 aaPredicted RBP6.18□□□□□ -1.42
CNKSR3-202ENST00000433165 HSPE1P61604 102 aaKnown RBP6.18□□□□□ -1.42
CNKSR3-202ENST00000433165 UBE2L3P68036 154 aaKnown RBP6.18□□□□□ -1.42
CNKSR3-202ENST00000433165 RPL24P83731 157 aaKnown RBP6.18□□□□□ -1.42
CNKSR3-202ENST00000433165 CCDC144NLQ6NUI1 221 aa6.18□□□□□ -1.42
CNKSR3-202ENST00000433165 OR2Z1Q8NG97 314 aa6.18□□□□□ -1.42
CNKSR3-202ENST00000433165 GTSF1Q8WW33 167 aa6.18□□□□□ -1.42
CNKSR3-202ENST00000433165 NANOS1Q8WY41 292 aaKnown RBP6.18□□□□□ -1.42
CNKSR3-202ENST00000433165 TMUB1Q9BVT8 246 aa6.18□□□□□ -1.42
CNKSR3-202ENST00000433165 RPP21Q9H633 154 aaKnown RBP6.18□□□□□ -1.42
CNKSR3-202ENST00000433165 HILPDAQ9Y5L2 63 aa6.18□□□□□ -1.42
CNKSR3-202ENST00000433165 TSSC4Q9Y5U2 329 aaPredicted RBP6.18□□□□□ -1.42
CNKSR3-202ENST00000433165 H0Y8G0 127 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms