RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 SHANK2-AS3Q9BTD1 123 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 SERTAD4Q9NUC0 356 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 C21orf62Q9NYP8 219 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 THYN1Q9P016 225 aa11.01□□□□□ -0.65
APOBEC3D-202ENST00000427494 ZNF705GA8MUZ8 300 aaPredicted RBP11□□□□□ -0.65
APOBEC3D-202ENST00000427494 IGHV3-23P01764 117 aa11□□□□□ -0.65
APOBEC3D-202ENST00000427494 YPEL3P61236 119 aaPredicted RBP11□□□□□ -0.65
APOBEC3D-202ENST00000427494 ATG101Q9BSB4 218 aa11□□□□□ -0.65
APOBEC3D-202ENST00000427494 ZNF586Q9NXT0 402 aa11□□□□□ -0.65
APOBEC3D-202ENST00000427494 AKAP6Q13023 2319 aa11□□□□□ -0.65
APOBEC3D-202ENST00000427494 WI2-2373I1.2A0A1W2PRP0 233 aa10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 HIST1H1EP10412 219 aaKnown RBP10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 CBLN1P23435 193 aa10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 ATP5J2P56134 94 aa10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 TCL1AP56279 114 aa10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 PAX8Q06710 450 aa10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 COA6Q5JTJ3 125 aaKnown RBP10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 CLEC2AQ6UVW9 174 aa10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 SGK494Q96LW2 274 aa10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 TMEM68Q96MH6 324 aa10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 IGHV3OR16-10A0A075B7F0 116 aa10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 F8W735 103 aaPredicted RBP10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 NDUFS8O00217 210 aa10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 ADMP35318 185 aa10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 ECSCRQ19T08 205 aa10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 PRR27Q6MZM9 219 aa10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 BPIFA4PQ86YQ2 179 aa10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 OTORQ9NRC9 128 aa10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 IGSF10Q6WRI0 2623 aa10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 MED13LQ71F56 2210 aa10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 CFAP46Q8IYW2 2715 aa10.99□□□□□ -0.65
APOBEC3D-202ENST00000427494 ABCA1O95477 2261 aa10.98□□□□□ -0.65
APOBEC3D-202ENST00000427494 VWC2LB2RUY7 222 aa10.98□□□□□ -0.65
APOBEC3D-202ENST00000427494 PRB1P04280 392 aa10.98□□□□□ -0.65
APOBEC3D-202ENST00000427494 TCRAP04437 139 aa10.98□□□□□ -0.65
APOBEC3D-202ENST00000427494 IER3P46695 156 aa10.98□□□□□ -0.65
APOBEC3D-202ENST00000427494 OR4F17Q8NGA8 305 aa10.98□□□□□ -0.65
APOBEC3D-202ENST00000427494 FMC1Q96HJ9 113 aa10.98□□□□□ -0.65
APOBEC3D-202ENST00000427494 HIST1H2BLQ99880 126 aa10.98□□□□□ -0.65
APOBEC3D-202ENST00000427494 TMUB1Q9BVT8 246 aa10.98□□□□□ -0.65
APOBEC3D-202ENST00000427494 FBXL7Q9UJT9 491 aa10.98□□□□□ -0.65
APOBEC3D-202ENST00000427494 KLF12Q9Y4X4 402 aa10.98□□□□□ -0.65
APOBEC3D-202ENST00000427494 OR2T8A6NH00 312 aa10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 GATCO43716 136 aaKnown RBP10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 SPINK4O60575 86 aa10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 FCGR2BP31994 310 aaPredicted RBP10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 USF2Q15853 346 aaPredicted RBP10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 PYY3Q5JQD4 70 aa10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 UNQ5815/PRO19632Q6UWF5 114 aa10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 FAM231DQ6ZW35 169 aa10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 FAM110DQ8TAY7 271 aaPredicted RBP10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 PACRGQ96M98 296 aaPredicted RBP10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 MRPL18Q9H0U6 180 aaKnown RBP10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 IGHV4-30-2A0A087WSY4 118 aa10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 SMIM27A0A1W2PRY6 76 aa10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 ATP6V0E1O15342 81 aa10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 SCGB2A1O75556 95 aa10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 CA1P00915 261 aaPredicted RBP10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 FRMD6-AS1P0C7T7 363 aa10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 RPL19P84098 196 aaKnown RBP10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 S100A7AQ86SG5 101 aa10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 EXOC3-AS1Q8N2X6 119 aa10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 GPR82Q96P67 336 aa10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 SPOCK3Q9BQ16 436 aa10.97□□□□□ -0.65
APOBEC3D-202ENST00000427494 ABCA2Q9BZC7 2435 aa10.96□□□□□ -0.65
APOBEC3D-202ENST00000427494 TRBV19A0A075B6N1 114 aa10.96□□□□□ -0.65
APOBEC3D-202ENST00000427494 TRAV40A0A0B4J280 105 aa10.96□□□□□ -0.65
APOBEC3D-202ENST00000427494 IGHV1-69DA0A0B4J2H0 117 aa10.96□□□□□ -0.65
APOBEC3D-202ENST00000427494 SH2D7A6NKC9 451 aaPredicted RBP10.96□□□□□ -0.65
APOBEC3D-202ENST00000427494 SNURFLB1AK76 121 aa10.96□□□□□ -0.65
APOBEC3D-202ENST00000427494 IGHV1-69P01742 117 aa10.96□□□□□ -0.65
APOBEC3D-202ENST00000427494 SLC35B1P78383 322 aa10.96□□□□□ -0.65
APOBEC3D-202ENST00000427494 NUDT10Q8NFP7 164 aa10.96□□□□□ -0.65
APOBEC3D-202ENST00000427494 CMTM2Q8TAZ6 248 aa10.96□□□□□ -0.65
APOBEC3D-202ENST00000427494 SMIM12Q96EX1 92 aa10.96□□□□□ -0.65
APOBEC3D-202ENST00000427494 NUDT11Q96G61 164 aa10.96□□□□□ -0.65
APOBEC3D-202ENST00000427494 C7orf69Q9H7B7 122 aa10.96□□□□□ -0.65
APOBEC3D-202ENST00000427494 RNF24Q9Y225 148 aa10.96□□□□□ -0.65
APOBEC3D-202ENST00000427494 AMBPP02760 352 aa10.96□□□□□ -0.66
APOBEC3D-202ENST00000427494 IGLC2P0DOY2 106 aa10.96□□□□□ -0.66
APOBEC3D-202ENST00000427494 BCL6BQ8N143 479 aaPredicted RBP10.96□□□□□ -0.66
APOBEC3D-202ENST00000427494 C17orf77Q96MU5 243 aa10.96□□□□□ -0.66
APOBEC3D-202ENST00000427494 TRBV9A0A0B4J1U6 114 aa10.95□□□□□ -0.66
APOBEC3D-202ENST00000427494 LTAP01374 205 aa10.95□□□□□ -0.66
APOBEC3D-202ENST00000427494 S100A12P80511 92 aa10.95□□□□□ -0.66
APOBEC3D-202ENST00000427494 BRD3OSQ6XYD6 125 aa10.95□□□□□ -0.66
APOBEC3D-202ENST00000427494 TMEM219Q86XT9 240 aa10.95□□□□□ -0.66
APOBEC3D-202ENST00000427494 C5orf56Q8N8D9 126 aa10.95□□□□□ -0.66
APOBEC3D-202ENST00000427494 MBD6Q96DN6 1003 aa10.95□□□□□ -0.66
APOBEC3D-202ENST00000427494 GRAMD2BQ96HH9 432 aa10.95□□□□□ -0.66
APOBEC3D-202ENST00000427494 TXN2Q99757 166 aa10.95□□□□□ -0.66
APOBEC3D-202ENST00000427494 GNB1LQ9BYB4 327 aa10.95□□□□□ -0.66
APOBEC3D-202ENST00000427494 ASH1LQ9NR48 2969 aaKnown RBP10.95□□□□□ -0.66
APOBEC3D-202ENST00000427494 IZUMO1RA6ND01 250 aa10.94□□□□□ -0.66
APOBEC3D-202ENST00000427494 MRPS12O15235 138 aaKnown RBP10.94□□□□□ -0.66
APOBEC3D-202ENST00000427494 CTSGP08311 255 aa10.94□□□□□ -0.66
APOBEC3D-202ENST00000427494 MRPL54Q6P161 138 aaKnown RBP10.94□□□□□ -0.66
APOBEC3D-202ENST00000427494 WDR73Q6P4I2 378 aa10.94□□□□□ -0.66
APOBEC3D-202ENST00000427494 GOLT1AQ6ZVE7 132 aa10.94□□□□□ -0.66
APOBEC3D-202ENST00000427494 VN1R17PQ8TDU5 208 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms