RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 S4R3C0 116 aa12.76□□□□□ -0.37
CTSB-203ENST00000420692 A6NNC1 897 aa12.75□□□□□ -0.37
CTSB-203ENST00000420692 HOXB4P17483 251 aaPredicted RBP12.75□□□□□ -0.37
CTSB-203ENST00000420692 CD33P20138 364 aa12.75□□□□□ -0.37
CTSB-203ENST00000420692 HES1Q14469 280 aa12.75□□□□□ -0.37
CTSB-203ENST00000420692 GDF5OSQ5U4N7 250 aa12.75□□□□□ -0.37
CTSB-203ENST00000420692 BCL6BQ8N143 479 aaPredicted RBP12.75□□□□□ -0.37
CTSB-203ENST00000420692 CMTM2Q8TAZ6 248 aa12.75□□□□□ -0.37
CTSB-203ENST00000420692 RASL11BQ9BPW5 248 aa12.75□□□□□ -0.37
CTSB-203ENST00000420692 GNB4Q9HAV0 340 aa12.75□□□□□ -0.37
CTSB-203ENST00000420692 RPH3ALQ9UNE2 315 aa12.75□□□□□ -0.37
CTSB-203ENST00000420692 GATCO43716 136 aaKnown RBP12.74□□□□□ -0.37
CTSB-203ENST00000420692 GPR6P46095 362 aaPredicted RBP12.74□□□□□ -0.37
CTSB-203ENST00000420692 PRR27Q6MZM9 219 aa12.74□□□□□ -0.37
CTSB-203ENST00000420692 ATG101Q9BSB4 218 aa12.74□□□□□ -0.37
CTSB-203ENST00000420692 TMEM14CQ9P0S9 112 aa12.74□□□□□ -0.37
CTSB-203ENST00000420692 SPTAN1Q13813 2472 aaKnown RBP12.74□□□□□ -0.37
CTSB-203ENST00000420692 C19orf84I3L1E1 186 aa12.74□□□□□ -0.37
CTSB-203ENST00000420692 TCRAP04437 139 aa12.74□□□□□ -0.37
CTSB-203ENST00000420692 AMY1AP04745 511 aa12.74□□□□□ -0.37
CTSB-203ENST00000420692 UQCRFS1P47985 274 aa12.74□□□□□ -0.37
CTSB-203ENST00000420692 C5orf17Q8NAS9 161 aa12.74□□□□□ -0.37
CTSB-203ENST00000420692 NUP35Q8NFH5 326 aa12.74□□□□□ -0.37
CTSB-203ENST00000420692 GRAMD2BQ96HH9 432 aa12.74□□□□□ -0.37
CTSB-203ENST00000420692 AJUBAQ96IF1 538 aa12.74□□□□□ -0.37
CTSB-203ENST00000420692 SIRPDQ9H106 197 aa12.74□□□□□ -0.37
CTSB-203ENST00000420692 CACNA1BQ00975 2339 aa12.73□□□□□ -0.37
CTSB-203ENST00000420692 F8W735 103 aaPredicted RBP12.73□□□□□ -0.37
CTSB-203ENST00000420692 BMPR1BO00238 502 aa12.73□□□□□ -0.37
CTSB-203ENST00000420692 WDR73Q6P4I2 378 aa12.73□□□□□ -0.37
CTSB-203ENST00000420692 Q6ZWC4 215 aa12.73□□□□□ -0.37
CTSB-203ENST00000420692 ZNF491Q8N8L2 437 aa12.73□□□□□ -0.37
CTSB-203ENST00000420692 ITLN2Q8WWU7 325 aaPredicted RBP12.73□□□□□ -0.37
CTSB-203ENST00000420692 C14orf144Q96I85 54 aa12.73□□□□□ -0.37
CTSB-203ENST00000420692 C17orf77Q96MU5 243 aa12.73□□□□□ -0.37
CTSB-203ENST00000420692 GPR82Q96P67 336 aa12.73□□□□□ -0.37
CTSB-203ENST00000420692 RBM14Q96PK6 669 aaKnown RBP12.73□□□□□ -0.37
CTSB-203ENST00000420692 PIEZO1Q92508 2521 aa12.73□□□□□ -0.37
CTSB-203ENST00000420692 TOMM40O96008 361 aa12.73□□□□□ -0.37
CTSB-203ENST00000420692 LTAP01374 205 aa12.73□□□□□ -0.37
CTSB-203ENST00000420692 MT-ND6P03923 174 aa12.73□□□□□ -0.37
CTSB-203ENST00000420692 DDTP30046 118 aa12.73□□□□□ -0.37
CTSB-203ENST00000420692 UBE2G1P62253 170 aa12.73□□□□□ -0.37
CTSB-203ENST00000420692 EXOC3-AS1Q8N2X6 119 aa12.73□□□□□ -0.37
CTSB-203ENST00000420692 KIR3DL3Q8N743 410 aa12.73□□□□□ -0.37
CTSB-203ENST00000420692 MS4A10Q96PG2 267 aa12.73□□□□□ -0.37
CTSB-203ENST00000420692 IGLV11-55A0A075B6I3 123 aa12.72□□□□□ -0.37
CTSB-203ENST00000420692 IGLV2-11P01706 119 aa12.72□□□□□ -0.37
CTSB-203ENST00000420692 HIST1H1EP10412 219 aaKnown RBP12.72□□□□□ -0.37
CTSB-203ENST00000420692 EBI3Q14213 229 aa12.72□□□□□ -0.37
CTSB-203ENST00000420692 ZNF562Q6V9R5 426 aa12.72□□□□□ -0.37
CTSB-203ENST00000420692 SHANK2-AS3Q9BTD1 123 aa12.72□□□□□ -0.37
CTSB-203ENST00000420692 UBTD1Q9HAC8 227 aa12.72□□□□□ -0.37
CTSB-203ENST00000420692 TRAV8-1A0A0A6YYK1 113 aa12.72□□□□□ -0.37
CTSB-203ENST00000420692 EGR2P11161 476 aaPredicted RBP12.72□□□□□ -0.37
CTSB-203ENST00000420692 SLAQ13239 276 aa12.72□□□□□ -0.37
CTSB-203ENST00000420692 PRSS22Q9GZN4 317 aa12.72□□□□□ -0.37
CTSB-203ENST00000420692 ZNF785A8K8V0 405 aa12.71□□□□□ -0.37
CTSB-203ENST00000420692 H3BRN7 92 aa12.71□□□□□ -0.37
CTSB-203ENST00000420692 MRPS12O15235 138 aaKnown RBP12.71□□□□□ -0.37
CTSB-203ENST00000420692 BAGE3Q86Y29 109 aa12.71□□□□□ -0.37
CTSB-203ENST00000420692 WIPF2Q8TF74 440 aaPredicted RBP12.71□□□□□ -0.37
CTSB-203ENST00000420692 TSKUQ8WUA8 353 aa12.71□□□□□ -0.37
CTSB-203ENST00000420692 RCHY1Q96PM5 261 aa12.71□□□□□ -0.37
CTSB-203ENST00000420692 NEU1Q99519 415 aa12.71□□□□□ -0.37
CTSB-203ENST00000420692 OTORQ9NRC9 128 aa12.71□□□□□ -0.37
CTSB-203ENST00000420692 RNF114Q9Y508 228 aa12.71□□□□□ -0.37
CTSB-203ENST00000420692 WI2-2373I1.2A0A1W2PRP0 233 aa12.7□□□□□ -0.38
CTSB-203ENST00000420692 C19orf71A6NCJ1 209 aa12.7□□□□□ -0.38
CTSB-203ENST00000420692 NPIPB5A8MRT5 1133 aa12.7□□□□□ -0.38
CTSB-203ENST00000420692 A8MWP6 167 aa12.7□□□□□ -0.38
CTSB-203ENST00000420692 TSTD3H0UI37 97 aa12.7□□□□□ -0.38
CTSB-203ENST00000420692 COX19Q49B96 90 aa12.7□□□□□ -0.38
CTSB-203ENST00000420692 ARPC1AQ92747 370 aa12.7□□□□□ -0.38
CTSB-203ENST00000420692 FMC1Q96HJ9 113 aa12.7□□□□□ -0.38
CTSB-203ENST00000420692 TMEM68Q96MH6 324 aa12.7□□□□□ -0.38
CTSB-203ENST00000420692 CELSR1Q9NYQ6 3014 aa12.7□□□□□ -0.38
CTSB-203ENST00000420692 NCBP2LA6PVI3 153 aaKnown RBP12.7□□□□□ -0.38
CTSB-203ENST00000420692 IGLC2P0DOY2 106 aa12.7□□□□□ -0.38
CTSB-203ENST00000420692 PRB4P10163 310 aaPredicted RBP12.7□□□□□ -0.38
CTSB-203ENST00000420692 TTC9CQ8N5M4 171 aa12.7□□□□□ -0.38
CTSB-203ENST00000420692 SMIM12Q96EX1 92 aa12.7□□□□□ -0.38
CTSB-203ENST00000420692 COL12A1Q99715 3063 aa12.69□□□□□ -0.38
CTSB-203ENST00000420692 HIGD1CA8MV81 97 aa12.69□□□□□ -0.38
CTSB-203ENST00000420692 SCGB1D1O95968 90 aa12.69□□□□□ -0.38
CTSB-203ENST00000420692 HLA-DQA1P01909 254 aa12.69□□□□□ -0.38
CTSB-203ENST00000420692 SRIP30626 198 aa12.69□□□□□ -0.38
CTSB-203ENST00000420692 LMO4P61968 165 aa12.69□□□□□ -0.38
CTSB-203ENST00000420692 PAFAH1B2P68402 229 aa12.69□□□□□ -0.38
CTSB-203ENST00000420692 DEFA6Q01524 100 aa12.69□□□□□ -0.38
CTSB-203ENST00000420692 USF2Q15853 346 aaPredicted RBP12.69□□□□□ -0.38
CTSB-203ENST00000420692 IQCJQ1A5X6 159 aa12.69□□□□□ -0.38
CTSB-203ENST00000420692 FAM120AOSQ5T036 256 aa12.69□□□□□ -0.38
CTSB-203ENST00000420692 MINOS1Q5TGZ0 78 aa12.69□□□□□ -0.38
CTSB-203ENST00000420692 RNF125Q96EQ8 232 aa12.69□□□□□ -0.38
CTSB-203ENST00000420692 TBX15Q96SF7 602 aa12.69□□□□□ -0.38
CTSB-203ENST00000420692 MINOS1-NBL1R4GNA1 71 aa12.69□□□□□ -0.38
CTSB-203ENST00000420692 CACNA1AO00555 2505 aa12.69□□□□□ -0.38
CTSB-203ENST00000420692 ABCA2Q9BZC7 2435 aa12.69□□□□□ -0.38
CTSB-203ENST00000420692 TRBV19A0A075B6N1 114 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms