RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 KRTAP1-3Q8IUG1 177 aa13.12□□□□□ -0.31
SSBP3-205ENST00000417664 EEF1AKMT3Q96AZ1 226 aa13.12□□□□□ -0.31
SSBP3-205ENST00000417664 VPS13CQ709C8 3753 aa13.11□□□□□ -0.31
SSBP3-205ENST00000417664 RAB5AP20339 215 aa13.11□□□□□ -0.31
SSBP3-205ENST00000417664 MYCNOSP40205 109 aa13.11□□□□□ -0.31
SSBP3-205ENST00000417664 ELOBQ15370 118 aa13.11□□□□□ -0.31
SSBP3-205ENST00000417664 ZNF600Q6ZNG1 722 aa13.11□□□□□ -0.31
SSBP3-205ENST00000417664 TEX29Q8N6K0 151 aa13.11□□□□□ -0.31
SSBP3-205ENST00000417664 MAPK1IP1LQ8NDC0 245 aa13.11□□□□□ -0.31
SSBP3-205ENST00000417664 ELOVL1Q9BW60 279 aa13.11□□□□□ -0.31
SSBP3-205ENST00000417664 SOX21Q9Y651 276 aaPredicted RBP13.11□□□□□ -0.31
SSBP3-205ENST00000417664 PRRC2AP48634 2157 aaKnown RBP13.11□□□□□ -0.31
SSBP3-205ENST00000417664 TRBV20OR9-2A0A075B6H5 130 aa13.1□□□□□ -0.31
SSBP3-205ENST00000417664 OR2T8A6NH00 312 aa13.1□□□□□ -0.31
SSBP3-205ENST00000417664 SH2D7A6NKC9 451 aaPredicted RBP13.1□□□□□ -0.31
SSBP3-205ENST00000417664 H7BYZ3 331 aa13.1□□□□□ -0.31
SSBP3-205ENST00000417664 CRYBA1P05813 215 aa13.1□□□□□ -0.31
SSBP3-205ENST00000417664 TAS2R60P59551 318 aa13.1□□□□□ -0.31
SSBP3-205ENST00000417664 DEFB112Q30KQ8 113 aa13.1□□□□□ -0.31
SSBP3-205ENST00000417664 ZNF329Q86UD4 541 aa13.1□□□□□ -0.31
SSBP3-205ENST00000417664 MLXQ9UH92 298 aa13.1□□□□□ -0.31
SSBP3-205ENST00000417664 S4R3C0 116 aa13.1□□□□□ -0.31
SSBP3-205ENST00000417664 POLQO75417 2590 aa13.1□□□□□ -0.31
SSBP3-205ENST00000417664 DOPEY2Q9Y3R5 2298 aa13.1□□□□□ -0.31
SSBP3-205ENST00000417664 CR1P17927 2039 aa13.09□□□□□ -0.31
SSBP3-205ENST00000417664 AP4M1O00189 453 aa13.09□□□□□ -0.31
SSBP3-205ENST00000417664 C9orf152Q5JTZ5 239 aa13.09□□□□□ -0.31
SSBP3-205ENST00000417664 OR5B12Q96R08 314 aa13.09□□□□□ -0.31
SSBP3-205ENST00000417664 BMPR1BO00238 502 aa13.08□□□□□ -0.31
SSBP3-205ENST00000417664 S100PP25815 95 aa13.08□□□□□ -0.31
SSBP3-205ENST00000417664 IER3P46695 156 aa13.08□□□□□ -0.31
SSBP3-205ENST00000417664 GNG4P50150 75 aa13.08□□□□□ -0.31
SSBP3-205ENST00000417664 FLI1Q01543 452 aaPredicted RBP13.08□□□□□ -0.31
SSBP3-205ENST00000417664 ATP5G2Q06055 141 aa13.08□□□□□ -0.31
SSBP3-205ENST00000417664 OR4F17Q8NGA8 305 aa13.08□□□□□ -0.31
SSBP3-205ENST00000417664 OCC1Q8TAD7 63 aa13.08□□□□□ -0.31
SSBP3-205ENST00000417664 CDC42EP3Q9UKI2 254 aa13.08□□□□□ -0.31
SSBP3-205ENST00000417664 CENPEQ02224 2701 aa13.08□□□□□ -0.32
SSBP3-205ENST00000417664 TRBV24-1A0A075B6N3 115 aa13.08□□□□□ -0.32
SSBP3-205ENST00000417664 ZNF98A6NK75 572 aa13.08□□□□□ -0.32
SSBP3-205ENST00000417664 PPIFP30405 207 aaKnown RBP13.08□□□□□ -0.32
SSBP3-205ENST00000417664 ADMP35318 185 aa13.08□□□□□ -0.32
SSBP3-205ENST00000417664 CNN1P51911 297 aaKnown RBP13.08□□□□□ -0.32
SSBP3-205ENST00000417664 RANP62826 216 aaKnown RBP13.08□□□□□ -0.32
SSBP3-205ENST00000417664 USF2Q15853 346 aaPredicted RBP13.08□□□□□ -0.32
SSBP3-205ENST00000417664 LEMD1Q68G75 181 aa13.08□□□□□ -0.32
SSBP3-205ENST00000417664 LYPD1Q8N2G4 141 aa13.08□□□□□ -0.32
SSBP3-205ENST00000417664 C5orf17Q8NAS9 161 aa13.08□□□□□ -0.32
SSBP3-205ENST00000417664 SFRP2Q96HF1 295 aa13.08□□□□□ -0.32
SSBP3-205ENST00000417664 USMG5Q96IX5 58 aa13.08□□□□□ -0.32
SSBP3-205ENST00000417664 IMMP2LQ96T52 175 aa13.08□□□□□ -0.32
SSBP3-205ENST00000417664 ABCA12Q86UK0 2595 aa13.07□□□□□ -0.32
SSBP3-205ENST00000417664 MDFIC2A0A1B0GVS7 189 aa13.07□□□□□ -0.32
SSBP3-205ENST00000417664 C1orf196B1AJZ1 125 aa13.07□□□□□ -0.32
SSBP3-205ENST00000417664 PEX7O00628 323 aa13.07□□□□□ -0.32
SSBP3-205ENST00000417664 TGOLN2O43493 480 aa13.07□□□□□ -0.32
SSBP3-205ENST00000417664 IGHV3-23P01764 117 aa13.07□□□□□ -0.32
SSBP3-205ENST00000417664 CLEC3BP05452 202 aa13.07□□□□□ -0.32
SSBP3-205ENST00000417664 S100A9P06702 114 aaKnown RBP13.07□□□□□ -0.32
SSBP3-205ENST00000417664 GPR183P32249 361 aa13.07□□□□□ -0.32
SSBP3-205ENST00000417664 RAB9AP51151 201 aa13.07□□□□□ -0.32
SSBP3-205ENST00000417664 C1QL4Q86Z23 238 aa13.07□□□□□ -0.32
SSBP3-205ENST00000417664 BLNKQ8WV28 456 aa13.07□□□□□ -0.32
SSBP3-205ENST00000417664 CHRDL1Q9BU40 450 aa13.07□□□□□ -0.32
SSBP3-205ENST00000417664 OTORQ9NRC9 128 aa13.07□□□□□ -0.32
SSBP3-205ENST00000417664 RABAC1Q9UI14 185 aa13.07□□□□□ -0.32
SSBP3-205ENST00000417664 EPDR1Q9UM22 224 aa13.07□□□□□ -0.32
SSBP3-205ENST00000417664 URGCP-MRPS24S4R325 110 aa13.07□□□□□ -0.32
SSBP3-205ENST00000417664 PGPA6NDG6 321 aa13.06□□□□□ -0.32
SSBP3-205ENST00000417664 SRP14P37108 136 aaKnown RBP13.06□□□□□ -0.32
SSBP3-205ENST00000417664 RAB5BP61020 215 aa13.06□□□□□ -0.32
SSBP3-205ENST00000417664 RELQ04864 619 aaPredicted RBP13.06□□□□□ -0.32
SSBP3-205ENST00000417664 PDE6HQ13956 83 aa13.06□□□□□ -0.32
SSBP3-205ENST00000417664 CENPWQ5EE01 88 aa13.06□□□□□ -0.32
SSBP3-205ENST00000417664 BCL6BQ8N143 479 aaPredicted RBP13.06□□□□□ -0.32
SSBP3-205ENST00000417664 BTF3L4Q96K17 158 aa13.06□□□□□ -0.32
SSBP3-205ENST00000417664 CCDC140Q96MF4 163 aa13.06□□□□□ -0.32
SSBP3-205ENST00000417664 PRDM13Q9H4Q3 707 aa13.06□□□□□ -0.32
SSBP3-205ENST00000417664 CSPG4Q6UVK1 2322 aa13.06□□□□□ -0.32
SSBP3-205ENST00000417664 LOC105371267A0A1B0GV96 52 aa13.05□□□□□ -0.32
SSBP3-205ENST00000417664 SLC25A5P05141 298 aaKnown RBP13.05□□□□□ -0.32
SSBP3-205ENST00000417664 PFN1P07737 140 aaKnown RBP13.05□□□□□ -0.32
SSBP3-205ENST00000417664 IGLC2P0DOY2 106 aa13.05□□□□□ -0.32
SSBP3-205ENST00000417664 RPL7P18124 248 aaKnown RBP13.05□□□□□ -0.32
SSBP3-205ENST00000417664 GALR1P47211 349 aa13.05□□□□□ -0.32
SSBP3-205ENST00000417664 BLCAPP62952 87 aa13.05□□□□□ -0.32
SSBP3-205ENST00000417664 Q6YL49 198 aa13.05□□□□□ -0.32
SSBP3-205ENST00000417664 SMIM12Q96EX1 92 aa13.05□□□□□ -0.32
SSBP3-205ENST00000417664 MS4A10Q96PG2 267 aa13.05□□□□□ -0.32
SSBP3-205ENST00000417664 Q9H3A6 140 aa13.05□□□□□ -0.32
SSBP3-205ENST00000417664 ZNF586Q9NXT0 402 aa13.05□□□□□ -0.32
SSBP3-205ENST00000417664 SVEP1Q4LDE5 3571 aa13.05□□□□□ -0.32
SSBP3-205ENST00000417664 CSMD2Q7Z408 3487 aa13.05□□□□□ -0.32
SSBP3-205ENST00000417664 CREBBPQ92793 2442 aa13.05□□□□□ -0.32
SSBP3-205ENST00000417664 TRBV19A0A075B6N1 114 aa13.05□□□□□ -0.32
SSBP3-205ENST00000417664 MRPS12O15235 138 aaKnown RBP13.05□□□□□ -0.32
SSBP3-205ENST00000417664 IGHV4-59P01825 116 aa13.05□□□□□ -0.32
SSBP3-205ENST00000417664 TRGV3P03979 118 aa13.05□□□□□ -0.32
SSBP3-205ENST00000417664 TEX38Q6PEX7 206 aa13.05□□□□□ -0.32
SSBP3-205ENST00000417664 KCNIP4Q6PIL6 250 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms