RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 SRRM4A7MD48 611 aaKnown RBP20.43■□□□□ 0.86
SPIRE1-202ENST00000409402 GFI1BQ5VTD9 330 aa20.43■□□□□ 0.86
SPIRE1-202ENST00000409402 FAM19A2Q8N3H0 131 aa20.43■□□□□ 0.86
SPIRE1-202ENST00000409402 LINC00477Q96M19 166 aa20.43■□□□□ 0.86
SPIRE1-202ENST00000409402 SRSF8Q9BRL6 282 aaKnown RBP20.43■□□□□ 0.86
SPIRE1-202ENST00000409402 MAPK1IP1LQ8NDC0 245 aa20.43■□□□□ 0.86
SPIRE1-202ENST00000409402 PLXNA3P51805 1871 aa20.43■□□□□ 0.86
SPIRE1-202ENST00000409402 INSP01308 110 aa20.42■□□□□ 0.86
SPIRE1-202ENST00000409402 HBDP02042 147 aa20.42■□□□□ 0.86
SPIRE1-202ENST00000409402 MGAMO43451 1857 aa20.42■□□□□ 0.86
SPIRE1-202ENST00000409402 BEND2Q8NDZ0 799 aa20.42■□□□□ 0.86
SPIRE1-202ENST00000409402 MGST2Q99735 147 aa20.42■□□□□ 0.86
SPIRE1-202ENST00000409402 RHPN1-AS1Q9BWJ2 59 aa20.42■□□□□ 0.86
SPIRE1-202ENST00000409402 GHRHP01286 108 aa20.42■□□□□ 0.86
SPIRE1-202ENST00000409402 PIP4P1Q86T03 277 aa20.42■□□□□ 0.86
SPIRE1-202ENST00000409402 NMSQ5H8A3 153 aa20.41■□□□□ 0.86
SPIRE1-202ENST00000409402 IGHV1-69DA0A0B4J2H0 117 aa20.41■□□□□ 0.86
SPIRE1-202ENST00000409402 TOMM40O96008 361 aa20.41■□□□□ 0.86
SPIRE1-202ENST00000409402 IGHV1-69P01742 117 aa20.41■□□□□ 0.86
SPIRE1-202ENST00000409402 EVI2AP22794 236 aa20.41■□□□□ 0.86
SPIRE1-202ENST00000409402 SPATA31B1PQ5VZV4 182 aa20.41■□□□□ 0.86
SPIRE1-202ENST00000409402 SLC25A20O43772 301 aa20.41■□□□□ 0.86
SPIRE1-202ENST00000409402 Q8TCH9 128 aa20.41■□□□□ 0.86
SPIRE1-202ENST00000409402 DAZ1Q9NQZ3 744 aaKnown RBP20.41■□□□□ 0.86
SPIRE1-202ENST00000409402 TRAV12-3A0A0B4J271 114 aa20.4■□□□□ 0.86
SPIRE1-202ENST00000409402 RPL36AP83881 106 aaKnown RBP20.4■□□□□ 0.86
SPIRE1-202ENST00000409402 KIF26BQ2KJY2 2108 aa20.4■□□□□ 0.86
SPIRE1-202ENST00000409402 RPL36ALQ969Q0 106 aaKnown RBP20.4■□□□□ 0.86
SPIRE1-202ENST00000409402 A8MXK9 166 aa20.4■□□□□ 0.86
SPIRE1-202ENST00000409402 PRB4P10163 310 aaPredicted RBP20.4■□□□□ 0.86
SPIRE1-202ENST00000409402 Q6ZS49 121 aa20.4■□□□□ 0.86
SPIRE1-202ENST00000409402 FXYD7P58549 80 aa20.4■□□□□ 0.86
SPIRE1-202ENST00000409402 TNFSF13O75888 250 aa20.39■□□□□ 0.85
SPIRE1-202ENST00000409402 SUPT4H1P63272 117 aaKnown RBP20.39■□□□□ 0.85
SPIRE1-202ENST00000409402 LINC01549A6NIU2 74 aa20.39■□□□□ 0.85
SPIRE1-202ENST00000409402 RNF182Q8N6D2 247 aa20.39■□□□□ 0.85
SPIRE1-202ENST00000409402 SNAI2O43623 268 aa20.39■□□□□ 0.85
SPIRE1-202ENST00000409402 ASCL4Q6XD76 172 aa20.39■□□□□ 0.85
SPIRE1-202ENST00000409402 SYNJ2BPP57105 145 aa20.38■□□□□ 0.85
SPIRE1-202ENST00000409402 TMEM14EPQ6UXP3 125 aa20.38■□□□□ 0.85
SPIRE1-202ENST00000409402 RLFQ13129 1914 aa20.38■□□□□ 0.85
SPIRE1-202ENST00000409402 PGPEP1LA6NFU8 196 aa20.38■□□□□ 0.85
SPIRE1-202ENST00000409402 NUDT11Q96G61 164 aa20.38■□□□□ 0.85
SPIRE1-202ENST00000409402 CACNA1BQ00975 2339 aa20.38■□□□□ 0.85
SPIRE1-202ENST00000409402 ADMP35318 185 aa20.38■□□□□ 0.85
SPIRE1-202ENST00000409402 RNF144BQ7Z419 303 aa20.38■□□□□ 0.85
SPIRE1-202ENST00000409402 ATP5L2Q7Z4Y8 100 aa20.38■□□□□ 0.85
SPIRE1-202ENST00000409402 DPH3P1Q9H4G8 78 aa20.38■□□□□ 0.85
SPIRE1-202ENST00000409402 IGHV2-70DA0A0C4DH43 119 aa20.38■□□□□ 0.85
SPIRE1-202ENST00000409402 QRFPP83859 136 aa20.38■□□□□ 0.85
SPIRE1-202ENST00000409402 OVOL3O00110 214 aa20.37■□□□□ 0.85
SPIRE1-202ENST00000409402 TCRAP04437 139 aa20.37■□□□□ 0.85
SPIRE1-202ENST00000409402 TICRRQ7Z2Z1 1910 aa20.37■□□□□ 0.85
SPIRE1-202ENST00000409402 ITGB1BP1O14713 200 aa20.37■□□□□ 0.85
SPIRE1-202ENST00000409402 GATA4P43694 442 aa20.37■□□□□ 0.85
SPIRE1-202ENST00000409402 C5orf24Q7Z6I8 188 aa20.37■□□□□ 0.85
SPIRE1-202ENST00000409402 C14orf144Q96I85 54 aa20.37■□□□□ 0.85
SPIRE1-202ENST00000409402 RIF1Q5UIP0 2472 aaKnown RBP20.37■□□□□ 0.85
SPIRE1-202ENST00000409402 CR1LQ2VPA4 569 aa20.37■□□□□ 0.85
SPIRE1-202ENST00000409402 IGHV3-73A0A0B4J1V6 119 aa20.37■□□□□ 0.85
SPIRE1-202ENST00000409402 LINC00614P0C842 121 aa20.37■□□□□ 0.85
SPIRE1-202ENST00000409402 J3QLI3 93 aa20.36■□□□□ 0.85
SPIRE1-202ENST00000409402 ETV2O00321 342 aaPredicted RBP20.36■□□□□ 0.85
SPIRE1-202ENST00000409402 UBE2E2Q96LR5 201 aa20.36■□□□□ 0.85
SPIRE1-202ENST00000409402 LCN12Q6JVE5 192 aa20.36■□□□□ 0.85
SPIRE1-202ENST00000409402 PGPEP1Q9NXJ5 209 aa20.36■□□□□ 0.85
SPIRE1-202ENST00000409402 CHTOPQ9Y3Y2 248 aaKnown RBP20.36■□□□□ 0.85
SPIRE1-202ENST00000409402 APOMO95445 188 aa20.36■□□□□ 0.85
SPIRE1-202ENST00000409402 SERF1AO75920 110 aa20.36■□□□□ 0.85
SPIRE1-202ENST00000409402 DPM2O94777 84 aa20.36■□□□□ 0.85
SPIRE1-202ENST00000409402 FREM3P0C091 2139 aa20.35■□□□□ 0.85
SPIRE1-202ENST00000409402 TMEM170AQ8WVE7 144 aa20.35■□□□□ 0.85
SPIRE1-202ENST00000409402 GNB1LQ9BYB4 327 aa20.35■□□□□ 0.85
SPIRE1-202ENST00000409402 ZNF562Q6V9R5 426 aa20.35■□□□□ 0.85
SPIRE1-202ENST00000409402 PROK2Q9HC23 129 aa20.35■□□□□ 0.85
SPIRE1-202ENST00000409402 IGHV3-53P01767 116 aa20.35■□□□□ 0.85
SPIRE1-202ENST00000409402 LYPD1Q8N2G4 141 aa20.34■□□□□ 0.85
SPIRE1-202ENST00000409402 ST6GALNAC6Q969X2 333 aa20.34■□□□□ 0.85
SPIRE1-202ENST00000409402 CLDN16Q9Y5I7 305 aa20.34■□□□□ 0.85
SPIRE1-202ENST00000409402 PRDM13Q9H4Q3 707 aa20.34■□□□□ 0.85
SPIRE1-202ENST00000409402 TCF20Q9UGU0 1960 aaKnown RBP20.34■□□□□ 0.85
SPIRE1-202ENST00000409402 LINC01619G3V211 115 aa20.34■□□□□ 0.85
SPIRE1-202ENST00000409402 FAM110DQ8TAY7 271 aaPredicted RBP20.34■□□□□ 0.85
SPIRE1-202ENST00000409402 ZNF581Q9P0T4 197 aa20.34■□□□□ 0.85
SPIRE1-202ENST00000409402 DMRT1Q9Y5R6 373 aa20.34■□□□□ 0.85
SPIRE1-202ENST00000409402 PSCAO43653 123 aa20.33■□□□□ 0.85
SPIRE1-202ENST00000409402 LINC00469Q8N7U9 141 aa20.33■□□□□ 0.85
SPIRE1-202ENST00000409402 CA1P00915 261 aaPredicted RBP20.33■□□□□ 0.85
SPIRE1-202ENST00000409402 IGKV1-16P04430 117 aa20.33■□□□□ 0.85
SPIRE1-202ENST00000409402 RNASE2P10153 161 aaKnown RBP20.33■□□□□ 0.85
SPIRE1-202ENST00000409402 RIPPLY3P57055 190 aa20.33■□□□□ 0.85
SPIRE1-202ENST00000409402 CTAG1AP78358 180 aa20.33■□□□□ 0.85
SPIRE1-202ENST00000409402 NRN1Q9NPD7 142 aa20.33■□□□□ 0.85
SPIRE1-202ENST00000409402 ZNF876PQ49A33 203 aa20.33■□□□□ 0.84
SPIRE1-202ENST00000409402 ATP6V0E1O15342 81 aa20.33■□□□□ 0.84
SPIRE1-202ENST00000409402 FGF16O43320 207 aa20.33■□□□□ 0.84
SPIRE1-202ENST00000409402 PARD6GQ9BYG4 376 aaPredicted RBP20.33■□□□□ 0.84
SPIRE1-202ENST00000409402 GZMBP10144 247 aa20.32■□□□□ 0.84
SPIRE1-202ENST00000409402 LINC00205P59089 165 aa20.32■□□□□ 0.84
SPIRE1-202ENST00000409402 C1QL4Q86Z23 238 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms