RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 SRSF9Q13242 221 aaKnown RBP eCLIP11.63□□□□□ -0.55
GABPA-202ENST00000400075 HLA-DQA1P01909 254 aa11.63□□□□□ -0.55
GABPA-202ENST00000400075 WDR83OSQ9Y284 106 aa11.63□□□□□ -0.55
GABPA-202ENST00000400075 PMS2P5A8MQ11 134 aa11.63□□□□□ -0.55
GABPA-202ENST00000400075 WISP2O76076 250 aa11.63□□□□□ -0.55
GABPA-202ENST00000400075 DANCRP0C864 163 aa11.63□□□□□ -0.55
GABPA-202ENST00000400075 PYYP10082 97 aa11.63□□□□□ -0.55
GABPA-202ENST00000400075 MST1LQ2TV78 715 aa11.63□□□□□ -0.55
GABPA-202ENST00000400075 LINC00311Q8N616 119 aa11.63□□□□□ -0.55
GABPA-202ENST00000400075 FMC1Q96HJ9 113 aa11.63□□□□□ -0.55
GABPA-202ENST00000400075 PARLQ9H300 379 aa11.63□□□□□ -0.55
GABPA-202ENST00000400075 IFT22Q9H7X7 185 aa11.63□□□□□ -0.55
GABPA-202ENST00000400075 ZNF581Q9P0T4 197 aa11.63□□□□□ -0.55
GABPA-202ENST00000400075 TMEM250H0YL14 139 aa11.62□□□□□ -0.55
GABPA-202ENST00000400075 TMEM183BQ1AE95 376 aa11.62□□□□□ -0.55
GABPA-202ENST00000400075 TMEM183AQ8IXX5 376 aa11.62□□□□□ -0.55
GABPA-202ENST00000400075 MRAPQ8TCY5 172 aa11.62□□□□□ -0.55
GABPA-202ENST00000400075 MUC21A0A0G2JKD1 596 aa11.62□□□□□ -0.55
GABPA-202ENST00000400075 MUC21A0A140T8X8 626 aa11.62□□□□□ -0.55
GABPA-202ENST00000400075 ZNF98A6NK75 572 aa11.62□□□□□ -0.55
GABPA-202ENST00000400075 FHITP49789 147 aa11.62□□□□□ -0.55
GABPA-202ENST00000400075 RIPPLY3P57055 190 aa11.62□□□□□ -0.55
GABPA-202ENST00000400075 POLQO75417 2590 aa11.62□□□□□ -0.55
GABPA-202ENST00000400075 PMS2P11Q13670 270 aa11.62□□□□□ -0.55
GABPA-202ENST00000400075 VAMP8Q9BV40 100 aa11.62□□□□□ -0.55
GABPA-202ENST00000400075 INSP01308 110 aa11.62□□□□□ -0.55
GABPA-202ENST00000400075 PRSS2P07478 247 aa11.62□□□□□ -0.55
GABPA-202ENST00000400075 TRGV9Q99603 122 aa11.62□□□□□ -0.55
GABPA-202ENST00000400075 GSX1Q9H4S2 264 aaPredicted RBP11.62□□□□□ -0.55
GABPA-202ENST00000400075 TRGV1A0A0A0MS02 117 aa11.61□□□□□ -0.55
GABPA-202ENST00000400075 TCTEX1D4Q5JR98 221 aa11.61□□□□□ -0.55
GABPA-202ENST00000400075 CHAC2Q8WUX2 184 aa11.61□□□□□ -0.55
GABPA-202ENST00000400075 PRADC1Q9BSG0 188 aa11.61□□□□□ -0.55
GABPA-202ENST00000400075 SRRM4A7MD48 611 aaKnown RBP11.61□□□□□ -0.55
GABPA-202ENST00000400075 FAM3BP58499 235 aaPredicted RBP11.61□□□□□ -0.55
GABPA-202ENST00000400075 STPG2Q8N412 459 aa11.61□□□□□ -0.55
GABPA-202ENST00000400075 LRTM2Q8N967 370 aa11.61□□□□□ -0.55
GABPA-202ENST00000400075 FER1L6-AS1Q8NA97 138 aa11.61□□□□□ -0.55
GABPA-202ENST00000400075 Q6ZS49 121 aa11.61□□□□□ -0.55
GABPA-202ENST00000400075 DENND4CQ5VZ89 1909 aa11.61□□□□□ -0.55
GABPA-202ENST00000400075 CXorf65A6NEN9 183 aa11.61□□□□□ -0.55
GABPA-202ENST00000400075 CD300CQ08708 224 aa11.61□□□□□ -0.55
GABPA-202ENST00000400075 RSPO1Q2MKA7 263 aaPredicted RBP11.61□□□□□ -0.55
GABPA-202ENST00000400075 HIST2H2BCQ6DN03 193 aa11.61□□□□□ -0.55
GABPA-202ENST00000400075 VN1R17PQ8TDU5 208 aa11.61□□□□□ -0.55
GABPA-202ENST00000400075 CHCHD5Q9BSY4 110 aa11.61□□□□□ -0.55
GABPA-202ENST00000400075 CTSZQ9UBR2 303 aa11.61□□□□□ -0.55
GABPA-202ENST00000400075 IGHV4-38-2P0DP08 117 aa11.6□□□□□ -0.55
GABPA-202ENST00000400075 PSG8Q9UQ74 426 aa11.6□□□□□ -0.55
GABPA-202ENST00000400075 C19orf84I3L1E1 186 aa11.6□□□□□ -0.55
GABPA-202ENST00000400075 DEFB130BP0DP73 79 aa11.6□□□□□ -0.55
GABPA-202ENST00000400075 DEFB130AP0DP74 79 aa11.6□□□□□ -0.55
GABPA-202ENST00000400075 APOC4P55056 127 aa11.6□□□□□ -0.55
GABPA-202ENST00000400075 DEFA6Q01524 100 aa11.6□□□□□ -0.55
GABPA-202ENST00000400075 LHFPL1Q86WI0 220 aa11.6□□□□□ -0.55
GABPA-202ENST00000400075 SLC25A39Q9BZJ4 359 aaPredicted RBP11.6□□□□□ -0.55
GABPA-202ENST00000400075 DSCAMO60469 2012 aa11.6□□□□□ -0.55
GABPA-202ENST00000400075 PSCAO43653 123 aa11.6□□□□□ -0.55
GABPA-202ENST00000400075 OR4C5Q8NGB2 326 aa11.6□□□□□ -0.55
GABPA-202ENST00000400075 ZNF256Q9Y2P7 627 aaPredicted RBP11.6□□□□□ -0.55
GABPA-202ENST00000400075 A0A1W2PPI3 338 aa11.6□□□□□ -0.55
GABPA-202ENST00000400075 IGKV1-5P01602 117 aa11.6□□□□□ -0.55
GABPA-202ENST00000400075 FXYD7P58549 80 aa11.6□□□□□ -0.55
GABPA-202ENST00000400075 C17orf58Q2M2W7 97 aa11.6□□□□□ -0.55
GABPA-202ENST00000400075 LRRC75A-AS1Q8N1F1 130 aa11.6□□□□□ -0.55
GABPA-202ENST00000400075 TBX15Q96SF7 602 aa11.6□□□□□ -0.55
GABPA-202ENST00000400075 SCRT1Q9BWW7 348 aa11.6□□□□□ -0.55
GABPA-202ENST00000400075 CNTFRP26992 372 aa11.59□□□□□ -0.55
GABPA-202ENST00000400075 TAS2R60P59551 318 aa11.59□□□□□ -0.55
GABPA-202ENST00000400075 RCHY1Q96PM5 261 aa11.59□□□□□ -0.55
GABPA-202ENST00000400075 A0A1B0GUT8 65 aa11.59□□□□□ -0.55
GABPA-202ENST00000400075 MEIG1Q5JSS6 88 aa11.59□□□□□ -0.55
GABPA-202ENST00000400075 LIME1Q9H400 295 aa11.59□□□□□ -0.55
GABPA-202ENST00000400075 NDUFB8O95169 186 aa11.59□□□□□ -0.55
GABPA-202ENST00000400075 NRN1Q9NPD7 142 aa11.59□□□□□ -0.55
GABPA-202ENST00000400075 NIT2Q9NQR4 276 aa11.59□□□□□ -0.55
GABPA-202ENST00000400075 EPDR1Q9UM22 224 aa11.59□□□□□ -0.55
GABPA-202ENST00000400075 PHOX2AO14813 284 aa11.58□□□□□ -0.55
GABPA-202ENST00000400075 TREML4Q6UXN2 200 aa11.58□□□□□ -0.55
GABPA-202ENST00000400075 ZFP30Q9Y2G7 519 aa11.58□□□□□ -0.55
GABPA-202ENST00000400075 SETD2Q9BYW2 2564 aaPredicted RBP11.58□□□□□ -0.56
GABPA-202ENST00000400075 PLA2G2AP14555 144 aa11.58□□□□□ -0.56
GABPA-202ENST00000400075 PCDH15Q96QU1 1955 aa11.58□□□□□ -0.56
GABPA-202ENST00000400075 A0A1W2PRE2 83 aa11.58□□□□□ -0.56
GABPA-202ENST00000400075 MMP23AO75900 390 aa11.58□□□□□ -0.56
GABPA-202ENST00000400075 GNG5P63218 68 aa11.58□□□□□ -0.56
GABPA-202ENST00000400075 Q6AWC8 147 aa11.58□□□□□ -0.56
GABPA-202ENST00000400075 WFDC11Q8NEX6 87 aa11.57□□□□□ -0.56
GABPA-202ENST00000400075 COL4A4P53420 1690 aaPredicted RBP11.57□□□□□ -0.56
GABPA-202ENST00000400075 CCL24O00175 119 aa11.57□□□□□ -0.56
GABPA-202ENST00000400075 QRFPP83859 136 aa11.57□□□□□ -0.56
GABPA-202ENST00000400075 IQCJQ1A5X6 159 aa11.57□□□□□ -0.56
GABPA-202ENST00000400075 XCL2Q9UBD3 114 aa11.57□□□□□ -0.56
GABPA-202ENST00000400075 HOXB4P17483 251 aaPredicted RBP11.57□□□□□ -0.56
GABPA-202ENST00000400075 LOXL1Q08397 574 aaPredicted RBP11.57□□□□□ -0.56
GABPA-202ENST00000400075 Q5BKY6 102 aa11.57□□□□□ -0.56
GABPA-202ENST00000400075 RARRES2Q99969 163 aa11.57□□□□□ -0.56
GABPA-202ENST00000400075 TRAV12-3A0A0B4J271 114 aa11.57□□□□□ -0.56
GABPA-202ENST00000400075 CIRBPQ14011 172 aaKnown RBP11.57□□□□□ -0.56
GABPA-202ENST00000400075 LINC00477Q96M19 166 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms