RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 SNRPCP09234 159 aaKnown RBP20.22■□□□□ 0.83
SHARPIN-202ENST00000398712 HIST1H1EP10412 219 aaKnown RBP20.22■□□□□ 0.83
SHARPIN-202ENST00000398712 C5orf17Q8NAS9 161 aa20.22■□□□□ 0.83
SHARPIN-202ENST00000398712 TMEM190Q8WZ59 177 aa20.22■□□□□ 0.83
SHARPIN-202ENST00000398712 TMUB1Q9BVT8 246 aa20.22■□□□□ 0.83
SHARPIN-202ENST00000398712 IGHV3OR16-10A0A075B7F0 116 aa20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 ISLRO14498 428 aa20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 MGST1P10620 155 aaKnown RBP20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 RPEL1Q2QD12 228 aa20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 FBXL7Q9UJT9 491 aa20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 V9GYV3 84 aa20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 F8W735 103 aaPredicted RBP20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 SLC17A3O00476 420 aa20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 ATP6V0E1O15342 81 aa20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 FCGR2BP31994 310 aaPredicted RBP20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 TMEM183BQ1AE95 376 aa20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 KLK9Q2XQG4 91 aa20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 ACTL10Q5JWF8 245 aa20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 BPIFA4PQ86YQ2 179 aa20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 C5orf56Q8N8D9 126 aa20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 VN1R17PQ8TDU5 208 aa20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 Q9H3A6 140 aa20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 KLK9Q9UKQ9 250 aa20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 MOB4Q9Y3A3 225 aa20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 FLNCQ14315 2725 aa20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 ABCA2Q9BZC7 2435 aa20.21■□□□□ 0.83
SHARPIN-202ENST00000398712 S100A9P06702 114 aaKnown RBP20.2■□□□□ 0.82
SHARPIN-202ENST00000398712 CDX1P47902 265 aaPredicted RBP20.2■□□□□ 0.82
SHARPIN-202ENST00000398712 ECSCRQ19T08 205 aa20.2■□□□□ 0.82
SHARPIN-202ENST00000398712 LINC00479Q96M42 142 aa20.2■□□□□ 0.82
SHARPIN-202ENST00000398712 MEGF9Q9H1U4 602 aa20.2■□□□□ 0.82
SHARPIN-202ENST00000398712 UBE2G1P62253 170 aa20.19■□□□□ 0.82
SHARPIN-202ENST00000398712 GNG5P63218 68 aa20.19■□□□□ 0.82
SHARPIN-202ENST00000398712 BAGE2Q86Y30 109 aa20.19■□□□□ 0.82
SHARPIN-202ENST00000398712 ATG101Q9BSB4 218 aa20.19■□□□□ 0.82
SHARPIN-202ENST00000398712 OTORQ9NRC9 128 aa20.19■□□□□ 0.82
SHARPIN-202ENST00000398712 HELZ2Q9BYK8 2649 aaKnown RBP20.19■□□□□ 0.82
SHARPIN-202ENST00000398712 SLC25A16P16260 332 aa20.18■□□□□ 0.82
SHARPIN-202ENST00000398712 OR4F17Q8NGA8 305 aa20.18■□□□□ 0.82
SHARPIN-202ENST00000398712 ZNF586Q9NXT0 402 aa20.18■□□□□ 0.82
SHARPIN-202ENST00000398712 MEOX2P50222 304 aa20.18■□□□□ 0.82
SHARPIN-202ENST00000398712 IBA57Q5T440 356 aaKnown RBP20.18■□□□□ 0.82
SHARPIN-202ENST00000398712 BRD3OSQ6XYD6 125 aa20.18■□□□□ 0.82
SHARPIN-202ENST00000398712 SMIM12Q96EX1 92 aa20.18■□□□□ 0.82
SHARPIN-202ENST00000398712 RNASE7Q9H1E1 156 aaKnown RBP20.18■□□□□ 0.82
SHARPIN-202ENST00000398712 C7orf69Q9H7B7 122 aa20.18■□□□□ 0.82
SHARPIN-202ENST00000398712 KLF12Q9Y4X4 402 aa20.18■□□□□ 0.82
SHARPIN-202ENST00000398712 ABCA1O95477 2261 aa20.17■□□□□ 0.82
SHARPIN-202ENST00000398712 UBR5O95071 2799 aaPredicted RBP20.17■□□□□ 0.82
SHARPIN-202ENST00000398712 TRAV34A0A0B4J273 112 aa20.17■□□□□ 0.82
SHARPIN-202ENST00000398712 B4DSR2 109 aa20.17■□□□□ 0.82
SHARPIN-202ENST00000398712 SPTAN1Q13813 2472 aaKnown RBP20.17■□□□□ 0.82
SHARPIN-202ENST00000398712 ZNF98A6NK75 572 aa20.16■□□□□ 0.82
SHARPIN-202ENST00000398712 NRGNQ92686 78 aa20.16■□□□□ 0.82
SHARPIN-202ENST00000398712 FMC1Q96HJ9 113 aa20.16■□□□□ 0.82
SHARPIN-202ENST00000398712 C12orf57Q99622 126 aa20.16■□□□□ 0.82
SHARPIN-202ENST00000398712 PITPNC1Q9UKF7 332 aa20.16■□□□□ 0.82
SHARPIN-202ENST00000398712 FASNP49327 2511 aaKnown RBP20.16■□□□□ 0.82
SHARPIN-202ENST00000398712 OR2T8A6NH00 312 aa20.16■□□□□ 0.82
SHARPIN-202ENST00000398712 H3BTX0 84 aa20.16■□□□□ 0.82
SHARPIN-202ENST00000398712 RPL15P61313 204 aaKnown RBP20.16■□□□□ 0.82
SHARPIN-202ENST00000398712 SRSF1Q07955 248 aaKnown RBP eCLIP20.16■□□□□ 0.82
SHARPIN-202ENST00000398712 USF2Q15853 346 aaPredicted RBP20.16■□□□□ 0.82
SHARPIN-202ENST00000398712 USP9XQ93008 2570 aaPredicted RBP20.16■□□□□ 0.82
SHARPIN-202ENST00000398712 IGHV3-23P01764 117 aa20.15■□□□□ 0.82
SHARPIN-202ENST00000398712 SMIM6P0DI80 62 aa20.15■□□□□ 0.82
SHARPIN-202ENST00000398712 IGHV4-38-2P0DP08 117 aa20.15■□□□□ 0.82
SHARPIN-202ENST00000398712 RPL19P84098 196 aaKnown RBP20.15■□□□□ 0.82
SHARPIN-202ENST00000398712 NHLRC2Q8NBF2 726 aa20.15■□□□□ 0.82
SHARPIN-202ENST00000398712 RPH3ALQ9UNE2 315 aa20.15■□□□□ 0.82
SHARPIN-202ENST00000398712 TRAPPC1Q9Y5R8 145 aa20.15■□□□□ 0.82
SHARPIN-202ENST00000398712 TCRAP04437 139 aa20.14■□□□□ 0.81
SHARPIN-202ENST00000398712 GATA3P23771 443 aa20.14■□□□□ 0.81
SHARPIN-202ENST00000398712 FAM231DQ6ZW35 169 aa20.14■□□□□ 0.81
SHARPIN-202ENST00000398712 TMEM219Q86XT9 240 aa20.14■□□□□ 0.81
SHARPIN-202ENST00000398712 PIFOQ8TCI5 191 aa20.14■□□□□ 0.81
SHARPIN-202ENST00000398712 TRBV19A0A075B6N1 114 aa20.13■□□□□ 0.81
SHARPIN-202ENST00000398712 TRBV9A0A0B4J1U6 114 aa20.13■□□□□ 0.81
SHARPIN-202ENST00000398712 TRAV20A0A0B4J274 112 aa20.13■□□□□ 0.81
SHARPIN-202ENST00000398712 CTSGP08311 255 aa20.13■□□□□ 0.81
SHARPIN-202ENST00000398712 IGLC2P0DOY2 106 aa20.13■□□□□ 0.81
SHARPIN-202ENST00000398712 RHOGP84095 191 aa20.13■□□□□ 0.81
SHARPIN-202ENST00000398712 C15orf32Q32M92 178 aa20.13■□□□□ 0.81
SHARPIN-202ENST00000398712 LYPD1Q8N2G4 141 aa20.13■□□□□ 0.81
SHARPIN-202ENST00000398712 GAR1Q9NY12 217 aaKnown RBP20.13■□□□□ 0.81
SHARPIN-202ENST00000398712 S100A7P31151 101 aa20.13■□□□□ 0.81
SHARPIN-202ENST00000398712 CMTM2Q8TAZ6 248 aa20.13■□□□□ 0.81
SHARPIN-202ENST00000398712 ZNF502Q8TBZ5 544 aa20.13■□□□□ 0.81
SHARPIN-202ENST00000398712 GPR82Q96P67 336 aa20.13■□□□□ 0.81
SHARPIN-202ENST00000398712 HIF1ANQ9NWT6 349 aa20.13■□□□□ 0.81
SHARPIN-202ENST00000398712 PLA2G2AP14555 144 aa20.12■□□□□ 0.81
SHARPIN-202ENST00000398712 CHRDL1Q9BU40 450 aa20.12■□□□□ 0.81
SHARPIN-202ENST00000398712 SERTAD4Q9NUC0 356 aa20.12■□□□□ 0.81
SHARPIN-202ENST00000398712 COL12A1Q99715 3063 aa20.11■□□□□ 0.81
SHARPIN-202ENST00000398712 A1L4Q6 167 aa20.11■□□□□ 0.81
SHARPIN-202ENST00000398712 SH2D7A6NKC9 451 aaPredicted RBP20.11■□□□□ 0.81
SHARPIN-202ENST00000398712 ZNF705GA8MUZ8 300 aaPredicted RBP20.11■□□□□ 0.81
SHARPIN-202ENST00000398712 S100A2P29034 98 aa20.11■□□□□ 0.81
SHARPIN-202ENST00000398712 HIST3H2BBQ8N257 126 aa20.11■□□□□ 0.81
SHARPIN-202ENST00000398712 TENM4Q6N022 2769 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms