RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 RPP21Q9H633 154 aaKnown RBP6.66□□□□□ -1.34
TCF4-203ENST00000398339 NDUFA4L2Q9NRX3 87 aa6.66□□□□□ -1.34
TCF4-203ENST00000398339 EPDR1Q9UM22 224 aa6.66□□□□□ -1.34
TCF4-203ENST00000398339 FRYQ5TBA9 3013 aa6.66□□□□□ -1.34
TCF4-203ENST00000398339 MUC21A0A0G2JKD1 596 aa6.66□□□□□ -1.34
TCF4-203ENST00000398339 MUC21A0A140T8X8 626 aa6.66□□□□□ -1.34
TCF4-203ENST00000398339 B5MCH6 92 aa6.66□□□□□ -1.34
TCF4-203ENST00000398339 CD24P25063 80 aa6.66□□□□□ -1.34
TCF4-203ENST00000398339 ERHP84090 104 aaKnown RBP6.66□□□□□ -1.34
TCF4-203ENST00000398339 MUC21Q5SSG8 566 aa6.66□□□□□ -1.34
TCF4-203ENST00000398339 UFSP1Q6NVU6 142 aa6.66□□□□□ -1.34
TCF4-203ENST00000398339 DUX4L9Q6RFH8 374 aaPredicted RBP6.66□□□□□ -1.34
TCF4-203ENST00000398339 C12orf54Q6X4T0 127 aa6.66□□□□□ -1.34
TCF4-203ENST00000398339 SCRT2Q9NQ03 307 aa6.66□□□□□ -1.34
TCF4-203ENST00000398339 ERG28Q9UKR5 140 aa6.66□□□□□ -1.34
TCF4-203ENST00000398339 KLF12Q9Y4X4 402 aa6.66□□□□□ -1.34
TCF4-203ENST00000398339 SOX21Q9Y651 276 aaPredicted RBP6.66□□□□□ -1.34
TCF4-203ENST00000398339 AHCTF1Q8WYP5 2266 aa6.66□□□□□ -1.34
TCF4-203ENST00000398339 TCRBV4S1A1TA0A5B7 111 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 SLC25A5P05141 298 aaKnown RBP6.65□□□□□ -1.34
TCF4-203ENST00000398339 CT83Q5H943 113 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 LINC00322Q6ZN03 302 aaPredicted RBP6.65□□□□□ -1.34
TCF4-203ENST00000398339 SLC25A48Q6ZT89 311 aaKnown RBP6.65□□□□□ -1.34
TCF4-203ENST00000398339 TMEM178AQ8NBL3 297 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 GTSF1Q8WW33 167 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 SGK494Q96LW2 274 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 GPR82Q96P67 336 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 SPATA25Q9BR10 227 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 PRSS22Q9GZN4 317 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 FNDC4Q9H6D8 234 aaPredicted RBP6.65□□□□□ -1.34
TCF4-203ENST00000398339 ZNRD1Q9P1U0 126 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 CSDC2Q9Y534 153 aaKnown RBP6.65□□□□□ -1.34
TCF4-203ENST00000398339 MED13Q9UHV7 2174 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 IGKV1D-37A0A075B6S9 117 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 A8MWL6 223 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 INS-IGF2F8WCM5 200 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 MOSP00540 346 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 HLA-DRB1P01911 266 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 PDPNQ86YL7 162 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 C9orf106Q8NAJ2 232 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 ITLN1Q8WWA0 313 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 NPIPB3Q92617 1050 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 PGLYRP4Q96LB8 373 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 MLST8Q9BVC4 326 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 LINC00574Q9H8X3 128 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 HSPB8Q9UJY1 196 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 ZNF835Q9Y2P0 537 aa6.65□□□□□ -1.34
TCF4-203ENST00000398339 TRAV8-6A0A0B4J262 113 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 C19orf71A6NCJ1 209 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 PGPA6NDG6 321 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 E7EUB6 86 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 CD5LO43866 347 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 CEACAM4O75871 244 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 PLAUP00749 431 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 OR5AL1P0C617 328 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 LINC00305Q7Z4B0 112 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 THAP8Q8NA92 274 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 OSR1Q8TAX0 266 aaPredicted RBP6.64□□□□□ -1.35
TCF4-203ENST00000398339 RND1Q92730 232 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 MAP1LC3CQ9BXW4 147 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 MS4A6AQ9H2W1 248 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 PPDPFQ9H3Y8 114 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 ZNF492Q9P255 531 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 RPUSD1Q9UJJ7 312 aaKnown RBP6.64□□□□□ -1.35
TCF4-203ENST00000398339 SPRY3O43610 288 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 P01737 135 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 IGHG3P01860 377 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 TMEM30BQ3MIR4 351 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 ATP1A1-AS1Q5TC04 95 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 RBMXL3Q8N7X1 1067 aaKnown RBP6.64□□□□□ -1.35
TCF4-203ENST00000398339 ZNF418Q8TF45 676 aaPredicted RBP6.64□□□□□ -1.35
TCF4-203ENST00000398339 GAFA1Q96PS6 74 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 NDFIP1Q9BT67 221 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 GFRA4Q9GZZ7 299 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 TNCP24821 2201 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 PRR14LQ5THK1 2151 aa6.64□□□□□ -1.35
TCF4-203ENST00000398339 GAGE10A6NGK3 116 aa6.63□□□□□ -1.35
TCF4-203ENST00000398339 LTAP01374 205 aa6.63□□□□□ -1.35
TCF4-203ENST00000398339 IGHV3-48P01763 117 aa6.63□□□□□ -1.35
TCF4-203ENST00000398339 ZNF137PP52743 207 aa6.63□□□□□ -1.35
TCF4-203ENST00000398339 HIST1H1AQ02539 215 aaPredicted RBP6.63□□□□□ -1.35
TCF4-203ENST00000398339 RBPMS2Q6ZRY4 209 aaKnown RBP6.63□□□□□ -1.35
TCF4-203ENST00000398339 ZNF833PQ6ZTB9 187 aa6.63□□□□□ -1.35
TCF4-203ENST00000398339 H1FXQ92522 213 aaKnown RBP6.63□□□□□ -1.35
TCF4-203ENST00000398339 FMC1Q96HJ9 113 aa6.63□□□□□ -1.35
TCF4-203ENST00000398339 MRPL20Q9BYC9 149 aaKnown RBP6.63□□□□□ -1.35
TCF4-203ENST00000398339 MRPL36Q9P0J6 103 aaKnown RBP6.63□□□□□ -1.35
TCF4-203ENST00000398339 CGB1A6NKQ9 187 aa6.63□□□□□ -1.35
TCF4-203ENST00000398339 TM4SF5O14894 197 aa6.63□□□□□ -1.35
TCF4-203ENST00000398339 APOA2P02652 100 aa6.63□□□□□ -1.35
TCF4-203ENST00000398339 SP9P0CG40 484 aa6.63□□□□□ -1.35
TCF4-203ENST00000398339 MFAP4P55083 255 aa6.63□□□□□ -1.35
TCF4-203ENST00000398339 WT1-ASQ06250 92 aa6.63□□□□□ -1.35
TCF4-203ENST00000398339 SRSF1Q07955 248 aaKnown RBP eCLIP6.63□□□□□ -1.35
TCF4-203ENST00000398339 LPAL2Q16609 132 aa6.63□□□□□ -1.35
TCF4-203ENST00000398339 PERPQ96FX8 193 aa6.63□□□□□ -1.35
TCF4-203ENST00000398339 CCL13Q99616 98 aa6.63□□□□□ -1.35
TCF4-203ENST00000398339 MCRIP2Q9BUT9 160 aaKnown RBP6.63□□□□□ -1.35
TCF4-203ENST00000398339 ZNF71Q9NQZ8 489 aaPredicted RBP6.63□□□□□ -1.35
TCF4-203ENST00000398339 SLC25A15Q9Y619 301 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms