RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 FANCD2OSQ96PS1 177 aa13.25□□□□□ -0.29
NUP50-202ENST00000396096 A0A1B0GUS0 222 aa13.24□□□□□ -0.29
NUP50-202ENST00000396096 TCRAP04437 139 aa13.24□□□□□ -0.29
NUP50-202ENST00000396096 UQCRFS1P47985 274 aa13.24□□□□□ -0.29
NUP50-202ENST00000396096 TCL1AP56279 114 aa13.24□□□□□ -0.29
NUP50-202ENST00000396096 FAM168AQ92567 244 aa13.24□□□□□ -0.29
NUP50-202ENST00000396096 ZNF586Q9NXT0 402 aa13.24□□□□□ -0.29
NUP50-202ENST00000396096 RNF24Q9Y225 148 aa13.24□□□□□ -0.29
NUP50-202ENST00000396096 WI2-2373I1.2A0A1W2PRP0 233 aa13.23□□□□□ -0.29
NUP50-202ENST00000396096 NUPR1O60356 82 aa13.23□□□□□ -0.29
NUP50-202ENST00000396096 LTAP01374 205 aa13.23□□□□□ -0.29
NUP50-202ENST00000396096 HLA-DQA1P01909 254 aa13.23□□□□□ -0.29
NUP50-202ENST00000396096 GNLYP22749 145 aa13.23□□□□□ -0.29
NUP50-202ENST00000396096 ZNF491Q8N8L2 437 aa13.23□□□□□ -0.29
NUP50-202ENST00000396096 ZZEF1O43149 2961 aa13.23□□□□□ -0.29
NUP50-202ENST00000396096 GRIFINA4D1Z8 144 aa13.23□□□□□ -0.29
NUP50-202ENST00000396096 C19orf84I3L1E1 186 aa13.23□□□□□ -0.29
NUP50-202ENST00000396096 UBE2E1P51965 193 aa13.23□□□□□ -0.29
NUP50-202ENST00000396096 LINC00310P59036 64 aa13.23□□□□□ -0.29
NUP50-202ENST00000396096 PKIAP61925 76 aa13.23□□□□□ -0.29
NUP50-202ENST00000396096 LMO4P61968 165 aa13.23□□□□□ -0.29
NUP50-202ENST00000396096 NDPQ00604 133 aa13.23□□□□□ -0.29
NUP50-202ENST00000396096 CMTM2Q8TAZ6 248 aa13.23□□□□□ -0.29
NUP50-202ENST00000396096 ZNF492Q9P255 531 aa13.23□□□□□ -0.29
NUP50-202ENST00000396096 NAT8BQ9UHF3 227 aa13.23□□□□□ -0.29
NUP50-202ENST00000396096 TRBV6-1A0A0K0K1D8 114 aa13.22□□□□□ -0.29
NUP50-202ENST00000396096 OVOL3O00110 214 aa13.22□□□□□ -0.29
NUP50-202ENST00000396096 TOX4O94842 621 aa13.22□□□□□ -0.29
NUP50-202ENST00000396096 MFAP4P55083 255 aa13.22□□□□□ -0.29
NUP50-202ENST00000396096 TSKUQ8WUA8 353 aa13.22□□□□□ -0.29
NUP50-202ENST00000396096 RNF125Q96EQ8 232 aa13.22□□□□□ -0.29
NUP50-202ENST00000396096 AJUBAQ96IF1 538 aa13.22□□□□□ -0.29
NUP50-202ENST00000396096 TBX15Q96SF7 602 aa13.22□□□□□ -0.29
NUP50-202ENST00000396096 SPTBN1Q01082 2364 aaKnown RBP13.21□□□□□ -0.29
NUP50-202ENST00000396096 NCBP2LA6PVI3 153 aaKnown RBP13.21□□□□□ -0.29
NUP50-202ENST00000396096 CA1P00915 261 aaPredicted RBP13.21□□□□□ -0.29
NUP50-202ENST00000396096 TMEM11P17152 192 aa13.21□□□□□ -0.29
NUP50-202ENST00000396096 PAFAH1B2P68402 229 aa13.21□□□□□ -0.29
NUP50-202ENST00000396096 USF2Q15853 346 aaPredicted RBP13.21□□□□□ -0.29
NUP50-202ENST00000396096 KLF17Q5JT82 389 aaPredicted RBP13.21□□□□□ -0.29
NUP50-202ENST00000396096 BPIFA4PQ86YQ2 179 aa13.21□□□□□ -0.29
NUP50-202ENST00000396096 PIEZO1Q92508 2521 aa13.21□□□□□ -0.29
NUP50-202ENST00000396096 SPINK4O60575 86 aa13.21□□□□□ -0.3
NUP50-202ENST00000396096 IGLC2P0DOY2 106 aa13.21□□□□□ -0.3
NUP50-202ENST00000396096 PAX1P15863 534 aa13.21□□□□□ -0.3
NUP50-202ENST00000396096 CT83Q5H943 113 aa13.21□□□□□ -0.3
NUP50-202ENST00000396096 S100A7AQ86SG5 101 aa13.21□□□□□ -0.3
NUP50-202ENST00000396096 LYPD1Q8N2G4 141 aa13.21□□□□□ -0.3
NUP50-202ENST00000396096 PRSS22Q9GZN4 317 aa13.21□□□□□ -0.3
NUP50-202ENST00000396096 C1RLQ9NZP8 487 aa13.21□□□□□ -0.3
NUP50-202ENST00000396096 TRBV19A0A075B6N1 114 aa13.2□□□□□ -0.3
NUP50-202ENST00000396096 C19orf71A6NCJ1 209 aa13.2□□□□□ -0.3
NUP50-202ENST00000396096 F8W735 103 aaPredicted RBP13.2□□□□□ -0.3
NUP50-202ENST00000396096 H3BTX0 84 aa13.2□□□□□ -0.3
NUP50-202ENST00000396096 MRPS12O15235 138 aaKnown RBP13.2□□□□□ -0.3
NUP50-202ENST00000396096 GNG7O60262 68 aa13.2□□□□□ -0.3
NUP50-202ENST00000396096 FAM106CPP0CH98 169 aa13.2□□□□□ -0.3
NUP50-202ENST00000396096 EGR2P11161 476 aaPredicted RBP13.2□□□□□ -0.3
NUP50-202ENST00000396096 SLC35B1P78383 322 aa13.2□□□□□ -0.3
NUP50-202ENST00000396096 OR10J3Q5JRS4 329 aa13.2□□□□□ -0.3
NUP50-202ENST00000396096 MRPL54Q6P161 138 aaKnown RBP13.2□□□□□ -0.3
NUP50-202ENST00000396096 Q8N9W7 124 aa13.2□□□□□ -0.3
NUP50-202ENST00000396096 NUP35Q8NFH5 326 aa13.2□□□□□ -0.3
NUP50-202ENST00000396096 ZNF331Q9NQX6 463 aaPredicted RBP13.2□□□□□ -0.3
NUP50-202ENST00000396096 THYN1Q9P016 225 aa13.2□□□□□ -0.3
NUP50-202ENST00000396096 RPH3ALQ9UNE2 315 aa13.2□□□□□ -0.3
NUP50-202ENST00000396096 RELNP78509 3460 aa13.2□□□□□ -0.3
NUP50-202ENST00000396096 ABCA1O95477 2261 aa13.2□□□□□ -0.3
NUP50-202ENST00000396096 NCOR2Q9Y618 2525 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 IGHV7-81A0A0B4J1V7 117 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 SERF1AO75920 110 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 HLA-DRB1P01911 266 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 IL4P05112 153 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 TPPP2P59282 170 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 RAB4BP61018 213 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 KLK9Q2XQG4 91 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 PRR27Q6MZM9 219 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 OR4F17Q8NGA8 305 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 BPESC1Q9GZL8 116 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 KLK9Q9UKQ9 250 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 CHD8Q9HCK8 2581 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 TRAV20A0A0B4J274 112 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 TSTD3H0UI37 97 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 IQCJQ1A5X6 159 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 C9orf152Q5JTZ5 239 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 ATP5L2Q7Z4Y8 100 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 Q86TA4 180 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 RPP21Q9H633 154 aaKnown RBP13.19□□□□□ -0.3
NUP50-202ENST00000396096 GNB4Q9HAV0 340 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 LPAR2Q9HBW0 351 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 C21orf62Q9NYP8 219 aa13.19□□□□□ -0.3
NUP50-202ENST00000396096 POLR3KQ9Y2Y1 108 aaPredicted RBP13.19□□□□□ -0.3
NUP50-202ENST00000396096 BMPR1BO00238 502 aa13.18□□□□□ -0.3
NUP50-202ENST00000396096 IGLV2-11P01706 119 aa13.18□□□□□ -0.3
NUP50-202ENST00000396096 FCGR2BP31994 310 aaPredicted RBP13.18□□□□□ -0.3
NUP50-202ENST00000396096 BAGE3Q86Y29 109 aa13.18□□□□□ -0.3
NUP50-202ENST00000396096 SGK494Q96LW2 274 aa13.18□□□□□ -0.3
NUP50-202ENST00000396096 MS4A10Q96PG2 267 aa13.18□□□□□ -0.3
NUP50-202ENST00000396096 NEU1Q99519 415 aa13.18□□□□□ -0.3
NUP50-202ENST00000396096 APCSP02743 223 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms