RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 F8VVB4 439 aa8.02□□□□□ -1.12
COL4A6-202ENST00000372216 F8VWA3 439 aa8.02□□□□□ -1.12
COL4A6-202ENST00000372216 ZNF876PQ49A33 203 aa8.02□□□□□ -1.12
COL4A6-202ENST00000372216 TMEM155Q4W5P6 130 aa8.02□□□□□ -1.12
COL4A6-202ENST00000372216 TMEM86BQ8N661 226 aa8.02□□□□□ -1.12
COL4A6-202ENST00000372216 XCL2Q9UBD3 114 aa8.02□□□□□ -1.12
COL4A6-202ENST00000372216 UQCR10Q9UDW1 63 aa8.02□□□□□ -1.12
COL4A6-202ENST00000372216 IL36BQ9NZH7 164 aa8.02□□□□□ -1.13
COL4A6-202ENST00000372216 DMRTC2Q8IXT2 367 aaPredicted RBP8.02□□□□□ -1.13
COL4A6-202ENST00000372216 ZNF114Q8NC26 417 aa8.02□□□□□ -1.13
COL4A6-202ENST00000372216 DAD1P61803 113 aa8.02□□□□□ -1.13
COL4A6-202ENST00000372216 SSBP2P81877 361 aaPredicted RBP8.02□□□□□ -1.13
COL4A6-202ENST00000372216 EXOC3-AS1Q8N2X6 119 aa8.02□□□□□ -1.13
COL4A6-202ENST00000372216 FNDC4Q9H6D8 234 aaPredicted RBP8.02□□□□□ -1.13
COL4A6-202ENST00000372216 SVILO95425 2214 aa8.02□□□□□ -1.13
COL4A6-202ENST00000372216 RP1L1Q8IWN7 2480 aaPredicted RBP8.01□□□□□ -1.13
COL4A6-202ENST00000372216 FABP5P3A8MUU1 101 aa8.01□□□□□ -1.13
COL4A6-202ENST00000372216 OOSP1A8MZH6 123 aa8.01□□□□□ -1.13
COL4A6-202ENST00000372216 SMIM6P0DI80 62 aa8.01□□□□□ -1.13
COL4A6-202ENST00000372216 FOXL1Q12952 345 aa8.01□□□□□ -1.13
COL4A6-202ENST00000372216 SPSB3Q6PJ21 355 aa8.01□□□□□ -1.13
COL4A6-202ENST00000372216 RNF114Q9Y508 228 aa8.01□□□□□ -1.13
COL4A6-202ENST00000372216 GGTLC3B5MD39 225 aa8.01□□□□□ -1.13
COL4A6-202ENST00000372216 NDUFS5O43920 106 aa8.01□□□□□ -1.13
COL4A6-202ENST00000372216 IGKV1D-17A0A075B6S4 117 aa8.01□□□□□ -1.13
COL4A6-202ENST00000372216 H0YJW9 148 aa8.01□□□□□ -1.13
COL4A6-202ENST00000372216 SRRM4A7MD48 611 aaKnown RBP8.01□□□□□ -1.13
COL4A6-202ENST00000372216 NDUFS8O00217 210 aa8.01□□□□□ -1.13
COL4A6-202ENST00000372216 IGFL3Q6UXB1 125 aa8.01□□□□□ -1.13
COL4A6-202ENST00000372216 PLXNA4Q9HCM2 1894 aa8.01□□□□□ -1.13
COL4A6-202ENST00000372216 RALGAPA1Q6GYQ0 2036 aa8.01□□□□□ -1.13
COL4A6-202ENST00000372216 NAPSAO96009 420 aa8.01□□□□□ -1.13
COL4A6-202ENST00000372216 ERCC8Q13216 396 aa8.01□□□□□ -1.13
COL4A6-202ENST00000372216 C6orf226Q5I0X4 101 aa8.01□□□□□ -1.13
COL4A6-202ENST00000372216 ORMDL3Q8N138 153 aa8.01□□□□□ -1.13
COL4A6-202ENST00000372216 Q8TAT8 98 aa8.01□□□□□ -1.13
COL4A6-202ENST00000372216 KIAA1671Q9BY89 1806 aa8.01□□□□□ -1.13
COL4A6-202ENST00000372216 PAX9P55771 341 aa8□□□□□ -1.13
COL4A6-202ENST00000372216 ZMAT4Q9H898 229 aa8□□□□□ -1.13
COL4A6-202ENST00000372216 NHP2Q9NX24 153 aaKnown RBP8□□□□□ -1.13
COL4A6-202ENST00000372216 DNAJC13O75165 2243 aa8□□□□□ -1.13
COL4A6-202ENST00000372216 Q6P435 159 aa8□□□□□ -1.13
COL4A6-202ENST00000372216 SCRT1Q9BWW7 348 aa8□□□□□ -1.13
COL4A6-202ENST00000372216 KLK9Q9UKQ9 250 aa8□□□□□ -1.13
COL4A6-202ENST00000372216 TRAV8-4A0A0B4J246 113 aa8□□□□□ -1.13
COL4A6-202ENST00000372216 TCRAP04437 139 aa8□□□□□ -1.13
COL4A6-202ENST00000372216 BTCP35070 178 aa8□□□□□ -1.13
COL4A6-202ENST00000372216 ANAPC10Q9UM13 185 aa8□□□□□ -1.13
COL4A6-202ENST00000372216 SNRNP200O75643 2136 aaKnown RBP8□□□□□ -1.13
COL4A6-202ENST00000372216 SRSF1Q07955 248 aaKnown RBP eCLIP8□□□□□ -1.13
COL4A6-202ENST00000372216 EPDR1Q9UM22 224 aa8□□□□□ -1.13
COL4A6-202ENST00000372216 SPCS1Q9Y6A9 102 aa8□□□□□ -1.13
COL4A6-202ENST00000372216 PGPEP1LA6NFU8 196 aa8□□□□□ -1.13
COL4A6-202ENST00000372216 OVOL1O14753 267 aa8□□□□□ -1.13
COL4A6-202ENST00000372216 GAGE12JA6NER3 117 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 M0R2P5 195 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 CMC4P56277 68 aaPredicted RBP7.99□□□□□ -1.13
COL4A6-202ENST00000372216 GAGE1Q13065 139 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 GAGE4Q13068 117 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 GAGE5Q13069 117 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 GAGE13Q4V321 117 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 PIP4P1Q86T03 277 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 RNF126Q9BV68 326 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 RNF222A6NCQ9 220 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 MSMBP08118 114 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 SAA4P35542 130 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 HGFACQ04756 655 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 RNF5Q99942 180 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 TRBV7-1A0A0A6YYK4 115 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 TRAV3A0A0B4J244 114 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 ZNF561-AS1K7EIQ3 104 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 SRP19P09132 144 aaKnown RBP7.99□□□□□ -1.13
COL4A6-202ENST00000372216 DEFB131AP59861 70 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 C5orf64Q2M2E5 130 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 TEX38Q6PEX7 206 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 C5orf24Q7Z6I8 188 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 THAP8Q8NA92 274 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 PSG8Q9UQ74 426 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 IZUMO1RA6ND01 250 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 PMS2P5A8MQ11 134 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 TMEM126AQ9H061 195 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 CEP290O15078 2479 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 IGHV3-38A0A0C4DH36 116 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 DKK1O94907 266 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 Q6AWC8 147 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 FOXL2NBQ6ZUU3 175 aa7.99□□□□□ -1.13
COL4A6-202ENST00000372216 A0A1B0GW15 77 aa7.98□□□□□ -1.13
COL4A6-202ENST00000372216 C22orf46C9J442 243 aa7.98□□□□□ -1.13
COL4A6-202ENST00000372216 E9PQ18 207 aa7.98□□□□□ -1.13
COL4A6-202ENST00000372216 ADMP35318 185 aa7.98□□□□□ -1.13
COL4A6-202ENST00000372216 RNF166Q96A37 237 aaPredicted RBP7.98□□□□□ -1.13
COL4A6-202ENST00000372216 Q9HAA7 133 aa7.98□□□□□ -1.13
COL4A6-202ENST00000372216 TRAV25A0A0B4J276 109 aa7.98□□□□□ -1.13
COL4A6-202ENST00000372216 H3BUT2 72 aa7.98□□□□□ -1.13
COL4A6-202ENST00000372216 CYSLTR1Q9Y271 337 aa7.98□□□□□ -1.13
COL4A6-202ENST00000372216 WDR81Q562E7 1941 aa7.98□□□□□ -1.13
COL4A6-202ENST00000372216 MPZP25189 248 aa7.98□□□□□ -1.13
COL4A6-202ENST00000372216 EFNB3Q15768 340 aa7.98□□□□□ -1.13
COL4A6-202ENST00000372216 RNF144BQ7Z419 303 aa7.98□□□□□ -1.13
COL4A6-202ENST00000372216 C1QL4Q86Z23 238 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms