RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 DOCK7Q96N67 2140 aa7.01□□□□□ -1.29
ABCA4-201ENST00000370225 RPL23P62829 140 aaKnown RBP7.01□□□□□ -1.29
ABCA4-201ENST00000370225 CD300EQ496F6 205 aaPredicted RBP7.01□□□□□ -1.29
ABCA4-201ENST00000370225 RNF114Q9Y508 228 aa7.01□□□□□ -1.29
ABCA4-201ENST00000370225 PHF3Q92576 2039 aaKnown RBP7.01□□□□□ -1.29
ABCA4-201ENST00000370225 CCL1P22362 96 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 DDTP30046 118 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 SRSF3P84103 164 aaKnown RBP7□□□□□ -1.29
ABCA4-201ENST00000370225 FOXL1Q12952 345 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 SLC25A48Q6ZT89 311 aaKnown RBP7□□□□□ -1.29
ABCA4-201ENST00000370225 ZNF581Q9P0T4 197 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 NEUROG3Q9Y4Z2 214 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 TRBV7-1A0A0A6YYK4 115 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 H0YJW9 148 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 Q6AWC8 147 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 ZNF98A6NK75 572 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 ZNF876PQ49A33 203 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 MINOS1Q5TGZ0 78 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 HEPN1Q6WQI6 88 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 C1orf122Q6ZSJ8 110 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 MRPL52Q86TS9 123 aaKnown RBP7□□□□□ -1.29
ABCA4-201ENST00000370225 WFDC1Q9HC57 220 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 MINOS1-NBL1R4GNA1 71 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 A0A1B0GWB2 263 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 TCRAP04437 139 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 SLC25A16P16260 332 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 A0A087WWL8 130 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 ERCC8Q13216 396 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 C5orf64Q2M2E5 130 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 PRB1P04280 392 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 RNF126Q9BV68 326 aa7□□□□□ -1.29
ABCA4-201ENST00000370225 FNDC1Q4ZHG4 1894 aaPredicted RBP7□□□□□ -1.29
ABCA4-201ENST00000370225 MSMBP08118 114 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 GATD1Q8NB37 220 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 SERF1AO75920 110 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 Q6ZS92 163 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 RNF144BQ7Z419 303 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 LINC00477Q96M19 166 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 MGAMO43451 1857 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 M0R1W7 72 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 OCC1Q8TAD7 63 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 PEF1Q9UBV8 284 aaKnown RBP6.99□□□□□ -1.29
ABCA4-201ENST00000370225 MBD3L4A6NDZ8 208 aaPredicted RBP6.99□□□□□ -1.29
ABCA4-201ENST00000370225 MBD3L3A6NE82 208 aaPredicted RBP6.99□□□□□ -1.29
ABCA4-201ENST00000370225 MBD3L5A6NJ08 208 aaPredicted RBP6.99□□□□□ -1.29
ABCA4-201ENST00000370225 A6NNC1 897 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 MBD3L2Q8NHZ7 208 aaPredicted RBP6.99□□□□□ -1.29
ABCA4-201ENST00000370225 LSM4Q9Y4Z0 139 aaKnown RBP6.99□□□□□ -1.29
ABCA4-201ENST00000370225 CACNA1DQ01668 2161 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 CACNA1BQ00975 2339 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 IGKV1D-17A0A075B6S4 117 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 RNF222A6NCQ9 220 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 OVOL3O00110 214 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 CDK2AP2O75956 126 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 CCL20P78556 96 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 DMRTC2Q8IXT2 367 aaPredicted RBP6.99□□□□□ -1.29
ABCA4-201ENST00000370225 RNF166Q96A37 237 aaPredicted RBP6.99□□□□□ -1.29
ABCA4-201ENST00000370225 KIAA2026Q5HYC2 2103 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 GFI1Q99684 422 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 RHPN1-AS1Q9BWJ2 59 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 JPT2Q9H910 190 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 XCL2Q9UBD3 114 aa6.99□□□□□ -1.29
ABCA4-201ENST00000370225 INSP01308 110 aa6.98□□□□□ -1.29
ABCA4-201ENST00000370225 TREML4Q6UXN2 200 aa6.98□□□□□ -1.29
ABCA4-201ENST00000370225 IGHV3-16A0A0C4DH30 117 aa6.98□□□□□ -1.29
ABCA4-201ENST00000370225 F5H768 121 aa6.98□□□□□ -1.29
ABCA4-201ENST00000370225 SPSB3Q6PJ21 355 aa6.98□□□□□ -1.29
ABCA4-201ENST00000370225 MGST2Q99735 147 aa6.98□□□□□ -1.29
ABCA4-201ENST00000370225 DEFB131AP59861 70 aa6.98□□□□□ -1.29
ABCA4-201ENST00000370225 C1orf159Q96HA4 380 aa6.98□□□□□ -1.29
ABCA4-201ENST00000370225 GBF1Q92538 1859 aa6.98□□□□□ -1.29
ABCA4-201ENST00000370225 VWA8A3KMH1 1905 aa6.98□□□□□ -1.29
ABCA4-201ENST00000370225 CEP250Q9BV73 2442 aa6.98□□□□□ -1.29
ABCA4-201ENST00000370225 NAPSAO96009 420 aa6.98□□□□□ -1.29
ABCA4-201ENST00000370225 CGB3P0DN86 165 aa6.98□□□□□ -1.29
ABCA4-201ENST00000370225 IFITM2Q01629 132 aa6.98□□□□□ -1.29
ABCA4-201ENST00000370225 NHP2Q9NX24 153 aaKnown RBP6.98□□□□□ -1.29
ABCA4-201ENST00000370225 PAX4O43316 350 aa6.98□□□□□ -1.29
ABCA4-201ENST00000370225 DPM2O94777 84 aa6.98□□□□□ -1.29
ABCA4-201ENST00000370225 CMC4P56277 68 aaPredicted RBP6.98□□□□□ -1.29
ABCA4-201ENST00000370225 RFNGQ9Y644 331 aa6.98□□□□□ -1.29
ABCA4-201ENST00000370225 LINC00473A8K010 186 aa6.97□□□□□ -1.29
ABCA4-201ENST00000370225 ZNF362Q5T0B9 420 aaPredicted RBP6.97□□□□□ -1.29
ABCA4-201ENST00000370225 LCN12Q6JVE5 192 aa6.97□□□□□ -1.29
ABCA4-201ENST00000370225 TMEM86BQ8N661 226 aa6.97□□□□□ -1.29
ABCA4-201ENST00000370225 BMPERQ8N8U9 685 aa6.97□□□□□ -1.29
ABCA4-201ENST00000370225 TRAV13-1A0A0B4J241 112 aa6.97□□□□□ -1.29
ABCA4-201ENST00000370225 KNCNA6PVL3 124 aa6.97□□□□□ -1.29
ABCA4-201ENST00000370225 RPL36AP83881 106 aaKnown RBP6.97□□□□□ -1.29
ABCA4-201ENST00000370225 MLANAQ16655 118 aa6.97□□□□□ -1.29
ABCA4-201ENST00000370225 RPL36ALQ969Q0 106 aaKnown RBP6.97□□□□□ -1.29
ABCA4-201ENST00000370225 A0A1B0GWJ7 208 aa6.97□□□□□ -1.29
ABCA4-201ENST00000370225 SH2D1AO60880 128 aa6.97□□□□□ -1.29
ABCA4-201ENST00000370225 GAS1P54826 345 aa6.97□□□□□ -1.29
ABCA4-201ENST00000370225 C14orf178Q8N769 122 aaPredicted RBP6.97□□□□□ -1.29
ABCA4-201ENST00000370225 INS-IGF2F8WCM5 200 aa6.97□□□□□ -1.29
ABCA4-201ENST00000370225 DKK1O94907 266 aa6.97□□□□□ -1.29
ABCA4-201ENST00000370225 B3GALT5-AS1P59052 145 aa6.97□□□□□ -1.29
ABCA4-201ENST00000370225 HGFACQ04756 655 aa6.97□□□□□ -1.29
ABCA4-201ENST00000370225 NIT1Q86X76 327 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms