RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 DAZ1Q9NQZ3 744 aaKnown RBP9.26□□□□□ -0.93
COL4A5-201ENST00000328300 C17orf58Q2M2W7 97 aa9.26□□□□□ -0.93
COL4A5-201ENST00000328300 SHANK2-AS3Q9BTD1 123 aa9.26□□□□□ -0.93
COL4A5-201ENST00000328300 RSPO3Q9BXY4 272 aaPredicted RBP9.26□□□□□ -0.93
COL4A5-201ENST00000328300 KLK15Q9H2R5 256 aa9.26□□□□□ -0.93
COL4A5-201ENST00000328300 NDUFA4L2Q9NRX3 87 aa9.26□□□□□ -0.93
COL4A5-201ENST00000328300 TRBV24-1A0A075B6N3 115 aa9.26□□□□□ -0.93
COL4A5-201ENST00000328300 TRGV2A0A075B6R0 118 aa9.26□□□□□ -0.93
COL4A5-201ENST00000328300 IGKV1-6A0A0C4DH72 117 aa9.26□□□□□ -0.93
COL4A5-201ENST00000328300 SLC17A3O00476 420 aa9.26□□□□□ -0.93
COL4A5-201ENST00000328300 TSPAN13O95857 204 aa9.26□□□□□ -0.93
COL4A5-201ENST00000328300 IGKV3-20P01619 116 aa9.26□□□□□ -0.93
COL4A5-201ENST00000328300 APOHP02749 345 aaPredicted RBP9.26□□□□□ -0.93
COL4A5-201ENST00000328300 C10orf55Q5SWW7 151 aa9.26□□□□□ -0.93
COL4A5-201ENST00000328300 WDR86Q86TI4 376 aa9.26□□□□□ -0.93
COL4A5-201ENST00000328300 RPRMLQ8N4K4 120 aa9.26□□□□□ -0.93
COL4A5-201ENST00000328300 CD7P09564 240 aa9.26□□□□□ -0.93
COL4A5-201ENST00000328300 RSPO1Q2MKA7 263 aaPredicted RBP9.26□□□□□ -0.93
COL4A5-201ENST00000328300 TTC9CQ8N5M4 171 aa9.26□□□□□ -0.93
COL4A5-201ENST00000328300 A0A1B0GWB2 263 aa9.25□□□□□ -0.93
COL4A5-201ENST00000328300 SCGB3A1Q96QR1 104 aa9.25□□□□□ -0.93
COL4A5-201ENST00000328300 C15orf65H3BRN8 121 aa9.25□□□□□ -0.93
COL4A5-201ENST00000328300 SRSF1Q07955 248 aaKnown RBP eCLIP9.25□□□□□ -0.935e-6■■■□□ 16.5
COL4A5-201ENST00000328300 RNF144BQ7Z419 303 aa9.25□□□□□ -0.93
COL4A5-201ENST00000328300 MRPL16Q9NX20 251 aaKnown RBP9.25□□□□□ -0.93
COL4A5-201ENST00000328300 LAMTOR2Q9Y2Q5 125 aa9.25□□□□□ -0.93
COL4A5-201ENST00000328300 SPCS1Q9Y6A9 102 aa9.25□□□□□ -0.93
COL4A5-201ENST00000328300 TRAV3A0A0B4J244 114 aa9.25□□□□□ -0.93
COL4A5-201ENST00000328300 TRAV8-6A0A0B4J262 113 aa9.25□□□□□ -0.93
COL4A5-201ENST00000328300 PIP4P2Q8N4L2 257 aa9.25□□□□□ -0.93
COL4A5-201ENST00000328300 ST6GALNAC6Q969X2 333 aa9.25□□□□□ -0.93
COL4A5-201ENST00000328300 CACNA1IQ9P0X4 2223 aa9.25□□□□□ -0.93
COL4A5-201ENST00000328300 DOCK8Q8NF50 2099 aa9.25□□□□□ -0.93
COL4A5-201ENST00000328300 A0A1W2PRX2 142 aa9.25□□□□□ -0.93
COL4A5-201ENST00000328300 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.25□□□□□ -0.93
COL4A5-201ENST00000328300 DAZAP2Q15038 168 aaPredicted RBP9.25□□□□□ -0.93
COL4A5-201ENST00000328300 TMEM160Q9NX00 188 aa9.25□□□□□ -0.93
COL4A5-201ENST00000328300 UBE2CO00762 179 aa9.25□□□□□ -0.93
COL4A5-201ENST00000328300 GNG5P63218 68 aa9.25□□□□□ -0.93
COL4A5-201ENST00000328300 PRDM13Q9H4Q3 707 aa9.25□□□□□ -0.93
COL4A5-201ENST00000328300 DMRTC2Q8IXT2 367 aaPredicted RBP9.24□□□□□ -0.93
COL4A5-201ENST00000328300 C10orf126Q8N4M7 172 aa9.24□□□□□ -0.93
COL4A5-201ENST00000328300 SHISA9B4DS77 424 aa9.24□□□□□ -0.93
COL4A5-201ENST00000328300 GFRA4Q9GZZ7 299 aa9.24□□□□□ -0.93
COL4A5-201ENST00000328300 SMPXQ9UHP9 88 aa9.24□□□□□ -0.93
COL4A5-201ENST00000328300 SNAI2O43623 268 aa9.24□□□□□ -0.93
COL4A5-201ENST00000328300 RP1P56715 2156 aa9.24□□□□□ -0.93
COL4A5-201ENST00000328300 CACNA1EQ15878 2313 aa9.24□□□□□ -0.93
COL4A5-201ENST00000328300 COL4A4P53420 1690 aaPredicted RBP9.24□□□□□ -0.93
COL4A5-201ENST00000328300 FBXL19-AS1Q494R0 122 aa9.24□□□□□ -0.93
COL4A5-201ENST00000328300 BRD3OSQ6XYD6 125 aa9.24□□□□□ -0.93
COL4A5-201ENST00000328300 ZNF503-AS2A6NEH8 195 aa9.24□□□□□ -0.93
COL4A5-201ENST00000328300 PSG3Q16557 428 aa9.24□□□□□ -0.93
COL4A5-201ENST00000328300 TMEM219Q86XT9 240 aa9.24□□□□□ -0.93
COL4A5-201ENST00000328300 OCC1Q8TAD7 63 aa9.24□□□□□ -0.93
COL4A5-201ENST00000328300 MCRIP2Q9BUT9 160 aaKnown RBP9.24□□□□□ -0.93
COL4A5-201ENST00000328300 IGHV2-70P01814 119 aa9.23□□□□□ -0.93
COL4A5-201ENST00000328300 SRSF3P84103 164 aaKnown RBP9.23□□□□□ -0.93
COL4A5-201ENST00000328300 ZNF415Q09FC8 603 aa9.23□□□□□ -0.93
COL4A5-201ENST00000328300 RPP25LQ8N5L8 163 aaKnown RBP9.23□□□□□ -0.93
COL4A5-201ENST00000328300 SAP30O75446 220 aa9.23□□□□□ -0.93
COL4A5-201ENST00000328300 NTF4P34130 210 aa9.23□□□□□ -0.93
COL4A5-201ENST00000328300 ZNF524Q96C55 264 aa9.23□□□□□ -0.93
COL4A5-201ENST00000328300 DERL1Q9BUN8 251 aa9.23□□□□□ -0.93
COL4A5-201ENST00000328300 TMEM50AO95807 157 aa9.23□□□□□ -0.93
COL4A5-201ENST00000328300 IFI27P40305 119 aaPredicted RBP9.23□□□□□ -0.93
COL4A5-201ENST00000328300 ZNF124Q15973 351 aa9.23□□□□□ -0.93
COL4A5-201ENST00000328300 MDC1Q14676 2089 aaKnown RBP9.23□□□□□ -0.93
COL4A5-201ENST00000328300 A0A1W2PPI3 338 aa9.23□□□□□ -0.93
COL4A5-201ENST00000328300 GCSAMLQ5JQS6 135 aa9.23□□□□□ -0.93
COL4A5-201ENST00000328300 SERF1AO75920 110 aa9.23□□□□□ -0.93
COL4A5-201ENST00000328300 GHRHP01286 108 aa9.23□□□□□ -0.93
COL4A5-201ENST00000328300 INSP01308 110 aa9.23□□□□□ -0.93
COL4A5-201ENST00000328300 FAM19A2Q8N3H0 131 aa9.23□□□□□ -0.93
COL4A5-201ENST00000328300 VSIRQ9H7M9 311 aa9.23□□□□□ -0.93
COL4A5-201ENST00000328300 PMS2P5A8MQ11 134 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 HBDP02042 147 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 MEIG1Q5JSS6 88 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 CYSLTR1Q9Y271 337 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 FAM231BA6NCW3 169 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 ELANEP08246 267 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 SUMO2P61956 95 aaKnown RBP9.22□□□□□ -0.93
COL4A5-201ENST00000328300 SPATA31B1PQ5VZV4 182 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 C1QL4Q86Z23 238 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 C18orf15Q96N68 181 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 SCRT1Q9BWW7 348 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 NRN1Q9NPD7 142 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 JKAMPQ9P055 326 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 RNF223E7ERA6 249 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 TMEM14CQ9P0S9 112 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 NOTCH4Q99466 2003 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 CA1P00915 261 aaPredicted RBP9.22□□□□□ -0.93
COL4A5-201ENST00000328300 ZNF492Q9P255 531 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 NDUFA4O00483 81 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 HIST1H2BKO60814 126 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 HIST1H2BJP06899 126 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 RNASE1P07998 156 aaKnown RBP9.22□□□□□ -0.93
COL4A5-201ENST00000328300 HIST1H2BOP23527 126 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 HIST1H2BBP33778 126 aa9.22□□□□□ -0.93
COL4A5-201ENST00000328300 HIST1H2BDP58876 126 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms