RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 DPM2O94777 84 aa13.79□□□□□ -0.2
CROCCP3-201ENST00000263511 UBE2DNLQ8IWF7 75 aa13.79□□□□□ -0.2
CROCCP3-201ENST00000263511 DICER1Q9UPY3 1922 aaKnown RBP13.79□□□□□ -0.2
CROCCP3-201ENST00000263511 TRAV3A0A0B4J244 114 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 FAM223BA6NKX1 122 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 PRTN3P24158 256 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 NMSQ5H8A3 153 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 FAM223AQ8IWN6 122 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 KLHL30-AS1Q8NEE0 82 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 GNB1LQ9BYB4 327 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 RNF114Q9Y508 228 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 TSPAN13O95857 204 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST1H2BKO60814 126 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 LY6HO94772 140 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST1H2BJP06899 126 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST1H2BOP23527 126 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST1H2BBP33778 126 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST1H2BDP58876 126 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST1H2BCP62807 126 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST2H2BEQ16778 126 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 LYPD2Q6UXB3 125 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 LHFPL4Q7Z7J7 247 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST1H2BHQ93079 126 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST1H2BNQ99877 126 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST1H2BMQ99879 126 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 ZNF138P52744 262 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 SUPT4H1P63272 117 aaKnown RBP13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 NIT1Q86X76 327 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 RNF166Q96A37 237 aaPredicted RBP13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 PGPEP1Q9NXJ5 209 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 EVI2AP22794 236 aa13.77□□□□□ -0.2
CROCCP3-201ENST00000263511 DEFB121Q5J5C9 76 aa13.77□□□□□ -0.2
CROCCP3-201ENST00000263511 LCNL1Q6ZST4 164 aa13.77□□□□□ -0.2
CROCCP3-201ENST00000263511 EXOC3-AS1Q8N2X6 119 aa13.77□□□□□ -0.2
CROCCP3-201ENST00000263511 SELENOKQ9Y6D0 94 aa13.77□□□□□ -0.2
CROCCP3-201ENST00000263511 MTURNQ8N3F0 131 aa13.77□□□□□ -0.2
CROCCP3-201ENST00000263511 COLCA2A8K830 154 aa13.77□□□□□ -0.21
CROCCP3-201ENST00000263511 SAA4P35542 130 aa13.77□□□□□ -0.21
CROCCP3-201ENST00000263511 TMEM14EPQ6UXP3 125 aa13.77□□□□□ -0.21
CROCCP3-201ENST00000263511 C1QTNF4Q9BXJ3 329 aa13.77□□□□□ -0.21
CROCCP3-201ENST00000263511 SRRM4A7MD48 611 aaKnown RBP13.77□□□□□ -0.21
CROCCP3-201ENST00000263511 GATA3P23771 443 aa13.77□□□□□ -0.21
CROCCP3-201ENST00000263511 ZNF329Q86UD4 541 aa13.77□□□□□ -0.21
CROCCP3-201ENST00000263511 REG4Q9BYZ8 158 aa13.77□□□□□ -0.21
CROCCP3-201ENST00000263511 SPATA31B1PQ5VZV4 182 aa13.77□□□□□ -0.21
CROCCP3-201ENST00000263511 MGST2Q99735 147 aa13.77□□□□□ -0.21
CROCCP3-201ENST00000263511 A0A1B0GV72 72 aa13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 LINC00473A8K010 186 aa13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 DTX1Q86Y01 620 aa13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 LINC00477Q96M19 166 aa13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 CHTOPQ9Y3Y2 248 aaKnown RBP13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 A0A1B0GWB2 263 aa13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 TCRAP04437 139 aa13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 NDPQ00604 133 aa13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 DIDO1Q9BTC0 2240 aaKnown RBP13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 RPL36AP83881 106 aaKnown RBP13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 ACTL10Q5JWF8 245 aa13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 RPL36ALQ969Q0 106 aaKnown RBP13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 CA1P00915 261 aaPredicted RBP13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 PLNP26678 52 aa13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 HGFACQ04756 655 aa13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 TRGV1A0A0A0MS02 117 aa13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 PRR30Q53SZ7 412 aaPredicted RBP13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 C1QL4Q86Z23 238 aa13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 CHCHD1Q96BP2 118 aaKnown RBP13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 ABCA1O95477 2261 aa13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 MSMBP08118 114 aa13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 Q6ZS49 121 aa13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 TMEM86BQ8N661 226 aa13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 LAMTOR2Q9Y2Q5 125 aa13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 TRAV1-1A0A0B4J248 108 aa13.74□□□□□ -0.21
CROCCP3-201ENST00000263511 FCN3O75636 299 aa13.74□□□□□ -0.21
CROCCP3-201ENST00000263511 RPL35AP18077 110 aaKnown RBP13.74□□□□□ -0.21
CROCCP3-201ENST00000263511 RNF223E7ERA6 249 aa13.74□□□□□ -0.21
CROCCP3-201ENST00000263511 AGMATQ9BSE5 352 aa13.74□□□□□ -0.21
CROCCP3-201ENST00000263511 SRSF8Q9BRL6 282 aaKnown RBP13.74□□□□□ -0.21
CROCCP3-201ENST00000263511 C3orf56Q8N813 242 aa13.74□□□□□ -0.21
CROCCP3-201ENST00000263511 SBF1O95248 1867 aa13.74□□□□□ -0.21
CROCCP3-201ENST00000263511 IGFL3Q6UXB1 125 aa13.73□□□□□ -0.21
CROCCP3-201ENST00000263511 BEND2Q8NDZ0 799 aa13.73□□□□□ -0.21
CROCCP3-201ENST00000263511 RHPN1-AS1Q9BWJ2 59 aa13.73□□□□□ -0.21
CROCCP3-201ENST00000263511 NBASA2RRP1 2371 aa13.73□□□□□ -0.21
CROCCP3-201ENST00000263511 C10orf126Q8N4M7 172 aa13.73□□□□□ -0.21
CROCCP3-201ENST00000263511 SPTAN1Q13813 2472 aaKnown RBP13.73□□□□□ -0.21
CROCCP3-201ENST00000263511 TRAV12-3A0A0B4J271 114 aa13.73□□□□□ -0.21
CROCCP3-201ENST00000263511 IFI27L1Q96BM0 104 aa13.73□□□□□ -0.21
CROCCP3-201ENST00000263511 PRB4P10163 310 aaPredicted RBP13.73□□□□□ -0.21
CROCCP3-201ENST00000263511 TOMM40O96008 361 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 INSP01308 110 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 ZNF876PQ49A33 203 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 HIST1H2BLQ99880 126 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 CLDN16Q9Y5I7 305 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 SPCS1Q9Y6A9 102 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 QRFPP83859 136 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 LYPD1Q8N2G4 141 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 IGKCP01834 107 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 GZMBP10144 247 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 LAGE3Q14657 143 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 LINC01559Q495D7 138 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms