RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 DPM2O94777 84 aa13.79□□□□□ -0.2
CROCCP3-201ENST00000263511 UBE2DNLQ8IWF7 75 aa13.79□□□□□ -0.2
CROCCP3-201ENST00000263511 DICER1Q9UPY3 1922 aaKnown RBP13.79□□□□□ -0.2
CROCCP3-201ENST00000263511 TRAV3A0A0B4J244 114 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 FAM223BA6NKX1 122 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 PRTN3P24158 256 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 NMSQ5H8A3 153 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 FAM223AQ8IWN6 122 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 KLHL30-AS1Q8NEE0 82 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 GNB1LQ9BYB4 327 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 RNF114Q9Y508 228 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 TSPAN13O95857 204 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST1H2BKO60814 126 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 LY6HO94772 140 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST1H2BJP06899 126 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST1H2BOP23527 126 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST1H2BBP33778 126 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST1H2BDP58876 126 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST1H2BCP62807 126 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST2H2BEQ16778 126 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 LYPD2Q6UXB3 125 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 LHFPL4Q7Z7J7 247 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST1H2BHQ93079 126 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST1H2BNQ99877 126 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 HIST1H2BMQ99879 126 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 ZNF138P52744 262 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 SUPT4H1P63272 117 aaKnown RBP13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 NIT1Q86X76 327 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 RNF166Q96A37 237 aaPredicted RBP13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 PGPEP1Q9NXJ5 209 aa13.78□□□□□ -0.2
CROCCP3-201ENST00000263511 EVI2AP22794 236 aa13.77□□□□□ -0.2
CROCCP3-201ENST00000263511 DEFB121Q5J5C9 76 aa13.77□□□□□ -0.2
CROCCP3-201ENST00000263511 LCNL1Q6ZST4 164 aa13.77□□□□□ -0.2
CROCCP3-201ENST00000263511 EXOC3-AS1Q8N2X6 119 aa13.77□□□□□ -0.2
CROCCP3-201ENST00000263511 SELENOKQ9Y6D0 94 aa13.77□□□□□ -0.2
CROCCP3-201ENST00000263511 MTURNQ8N3F0 131 aa13.77□□□□□ -0.2
CROCCP3-201ENST00000263511 COLCA2A8K830 154 aa13.77□□□□□ -0.21
CROCCP3-201ENST00000263511 SAA4P35542 130 aa13.77□□□□□ -0.21
CROCCP3-201ENST00000263511 TMEM14EPQ6UXP3 125 aa13.77□□□□□ -0.21
CROCCP3-201ENST00000263511 C1QTNF4Q9BXJ3 329 aa13.77□□□□□ -0.21
CROCCP3-201ENST00000263511 SRRM4A7MD48 611 aaKnown RBP13.77□□□□□ -0.21
CROCCP3-201ENST00000263511 GATA3P23771 443 aa13.77□□□□□ -0.21
CROCCP3-201ENST00000263511 ZNF329Q86UD4 541 aa13.77□□□□□ -0.21
CROCCP3-201ENST00000263511 REG4Q9BYZ8 158 aa13.77□□□□□ -0.21
CROCCP3-201ENST00000263511 SPATA31B1PQ5VZV4 182 aa13.77□□□□□ -0.21
CROCCP3-201ENST00000263511 MGST2Q99735 147 aa13.77□□□□□ -0.21
CROCCP3-201ENST00000263511 A0A1B0GV72 72 aa13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 LINC00473A8K010 186 aa13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 DTX1Q86Y01 620 aa13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 LINC00477Q96M19 166 aa13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 CHTOPQ9Y3Y2 248 aaKnown RBP13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 A0A1B0GWB2 263 aa13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 TCRAP04437 139 aa13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 NDPQ00604 133 aa13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 DIDO1Q9BTC0 2240 aaKnown RBP13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 RPL36AP83881 106 aaKnown RBP13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 ACTL10Q5JWF8 245 aa13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 RPL36ALQ969Q0 106 aaKnown RBP13.76□□□□□ -0.21
CROCCP3-201ENST00000263511 CA1P00915 261 aaPredicted RBP13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 PLNP26678 52 aa13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 HGFACQ04756 655 aa13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 TRGV1A0A0A0MS02 117 aa13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 PRR30Q53SZ7 412 aaPredicted RBP13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 C1QL4Q86Z23 238 aa13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 CHCHD1Q96BP2 118 aaKnown RBP13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 ABCA1O95477 2261 aa13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 MSMBP08118 114 aa13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 Q6ZS49 121 aa13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 TMEM86BQ8N661 226 aa13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 LAMTOR2Q9Y2Q5 125 aa13.75□□□□□ -0.21
CROCCP3-201ENST00000263511 TRAV1-1A0A0B4J248 108 aa13.74□□□□□ -0.21
CROCCP3-201ENST00000263511 FCN3O75636 299 aa13.74□□□□□ -0.21
CROCCP3-201ENST00000263511 RPL35AP18077 110 aaKnown RBP13.74□□□□□ -0.21
CROCCP3-201ENST00000263511 RNF223E7ERA6 249 aa13.74□□□□□ -0.21
CROCCP3-201ENST00000263511 AGMATQ9BSE5 352 aa13.74□□□□□ -0.21
CROCCP3-201ENST00000263511 SRSF8Q9BRL6 282 aaKnown RBP13.74□□□□□ -0.21
CROCCP3-201ENST00000263511 C3orf56Q8N813 242 aa13.74□□□□□ -0.21
CROCCP3-201ENST00000263511 SBF1O95248 1867 aa13.74□□□□□ -0.21
CROCCP3-201ENST00000263511 IGFL3Q6UXB1 125 aa13.73□□□□□ -0.21
CROCCP3-201ENST00000263511 BEND2Q8NDZ0 799 aa13.73□□□□□ -0.21
CROCCP3-201ENST00000263511 RHPN1-AS1Q9BWJ2 59 aa13.73□□□□□ -0.21
CROCCP3-201ENST00000263511 NBASA2RRP1 2371 aa13.73□□□□□ -0.21
CROCCP3-201ENST00000263511 C10orf126Q8N4M7 172 aa13.73□□□□□ -0.21
CROCCP3-201ENST00000263511 SPTAN1Q13813 2472 aaKnown RBP13.73□□□□□ -0.21
CROCCP3-201ENST00000263511 TRAV12-3A0A0B4J271 114 aa13.73□□□□□ -0.21
CROCCP3-201ENST00000263511 IFI27L1Q96BM0 104 aa13.73□□□□□ -0.21
CROCCP3-201ENST00000263511 PRB4P10163 310 aaPredicted RBP13.73□□□□□ -0.21
CROCCP3-201ENST00000263511 TOMM40O96008 361 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 INSP01308 110 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 ZNF876PQ49A33 203 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 HIST1H2BLQ99880 126 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 CLDN16Q9Y5I7 305 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 SPCS1Q9Y6A9 102 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 QRFPP83859 136 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 LYPD1Q8N2G4 141 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 IGKCP01834 107 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 GZMBP10144 247 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 LAGE3Q14657 143 aa13.72□□□□□ -0.21
CROCCP3-201ENST00000263511 LINC01559Q495D7 138 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms