RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 SEC16AO15027 2179 aa6.26□□□□□ -1.41
USP29-201ENST00000254181 PLXNA4Q9HCM2 1894 aa6.25□□□□□ -1.41
USP29-201ENST00000254181 LINC00479Q96M42 142 aa6.25□□□□□ -1.41
USP29-201ENST00000254181 C21orf62Q9NYP8 219 aa6.25□□□□□ -1.41
USP29-201ENST00000254181 PRNDQ9UKY0 176 aa6.25□□□□□ -1.41
USP29-201ENST00000254181 LRRK1Q38SD2 2015 aa6.25□□□□□ -1.41
USP29-201ENST00000254181 TANC2Q9HCD6 1990 aa6.25□□□□□ -1.41
USP29-201ENST00000254181 OOSP1A8MZH6 123 aa6.25□□□□□ -1.41
USP29-201ENST00000254181 GGTLC3B5MD39 225 aa6.25□□□□□ -1.41
USP29-201ENST00000254181 H0YGG7 62 aa6.25□□□□□ -1.41
USP29-201ENST00000254181 LTAP01374 205 aa6.25□□□□□ -1.41
USP29-201ENST00000254181 PMVKQ15126 192 aa6.25□□□□□ -1.41
USP29-201ENST00000254181 VN1R4Q7Z5H5 301 aa6.25□□□□□ -1.41
USP29-201ENST00000254181 LINC01561Q8N1V8 128 aa6.25□□□□□ -1.41
USP29-201ENST00000254181 RND1Q92730 232 aa6.25□□□□□ -1.41
USP29-201ENST00000254181 NUP210LQ5VU65 1888 aa6.25□□□□□ -1.41
USP29-201ENST00000254181 KIAA0100Q14667 2235 aaKnown RBP6.25□□□□□ -1.41
USP29-201ENST00000254181 USP17L23D6RBM5 183 aa6.25□□□□□ -1.41
USP29-201ENST00000254181 RBP4P02753 201 aa6.25□□□□□ -1.41
USP29-201ENST00000254181 CFHR1Q03591 330 aa6.25□□□□□ -1.41
USP29-201ENST00000254181 FOXC1Q12948 553 aa6.25□□□□□ -1.41
USP29-201ENST00000254181 MIR17HGQ75NE6 70 aa6.25□□□□□ -1.41
USP29-201ENST00000254181 AMMECR1Q9Y4X0 333 aaPredicted RBP6.25□□□□□ -1.41
USP29-201ENST00000254181 LINC01549A6NIU2 74 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 FAM90A26D6RGX4 464 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 IGKV1-5P01602 117 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 ERVK-16P61578 105 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 FHL5Q5TD97 284 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 PCSK4Q6UW60 755 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 NFE4Q86UQ8 179 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 ANKRD29Q8N6D5 301 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 AJUBAQ96IF1 538 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 CCL24O00175 119 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 Q6ZQT7 251 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 FAM231DQ6ZW35 169 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 GATD1Q8NB37 220 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 GJC3Q8NFK1 279 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 WDR83OSQ9Y284 106 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 TRBV25-1A0A075B6N4 114 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 IGLC6P0CF74 106 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 ASIPP42127 132 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 KIR2DS2P43631 304 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 CXCL17Q6UXB2 119 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 Q6ZR03 302 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 APRG1Q8IVJ8 170 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 BRWD1Q9NSI6 2320 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 COL18A1P39060 1754 aa6.24□□□□□ -1.41
USP29-201ENST00000254181 LMO7DNF2Z398 122 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 PRRG2O14669 202 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 MYOD1P15172 320 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 ORM2P19652 201 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 RIGQ13278 110 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 GDF5OSQ5U4N7 250 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 TEPPQ6URK8 271 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 ATP5L2Q7Z4Y8 100 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 OVCA2Q8WZ82 227 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 TMEM101Q96IK0 257 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 RPP25Q9BUL9 199 aaKnown RBP6.23□□□□□ -1.41
USP29-201ENST00000254181 KLK5Q9Y337 293 aaPredicted RBP6.23□□□□□ -1.41
USP29-201ENST00000254181 LOXL2Q9Y4K0 774 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 BRWD3Q6RI45 1802 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 FAM236AA0A1B0GUQ0 79 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 FAM236BA0A1B0GV22 79 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 FRG2CA6NGY1 282 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 C2CD4DB7Z1M9 353 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 SPINK2P20155 84 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 ZC2HC1BQ5TFG8 222 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 SLC37A2Q8TED4 501 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 FOXC2Q99958 501 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 TMEM74BQ9NUR3 256 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 HBDP02042 147 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 FGF6P10767 208 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 DSCR4P56555 118 aaPredicted RBP6.23□□□□□ -1.41
USP29-201ENST00000254181 INTS1Q8N201 2190 aaKnown RBP6.23□□□□□ -1.41
USP29-201ENST00000254181 TMEM86BQ8N661 226 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 BMFQ96LC9 184 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 RTL8AQ9BWD3 113 aa6.23□□□□□ -1.41
USP29-201ENST00000254181 URB1O60287 2271 aaKnown RBP6.22□□□□□ -1.41
USP29-201ENST00000254181 NDUFA7O95182 113 aa6.22□□□□□ -1.41
USP29-201ENST00000254181 FAM27E3Q08E93 113 aa6.22□□□□□ -1.41
USP29-201ENST00000254181 LGALS9BQ3B8N2 356 aa6.22□□□□□ -1.41
USP29-201ENST00000254181 LGALS9CQ6DKI2 356 aa6.22□□□□□ -1.41
USP29-201ENST00000254181 RPRMLQ8N4K4 120 aa6.22□□□□□ -1.41
USP29-201ENST00000254181 DOCK7Q96N67 2140 aa6.22□□□□□ -1.41
USP29-201ENST00000254181 DKK2Q9UBU2 259 aa6.22□□□□□ -1.41
USP29-201ENST00000254181 C17orf100A8MU93 164 aa6.22□□□□□ -1.41
USP29-201ENST00000254181 SRD5A1P18405 259 aa6.22□□□□□ -1.41
USP29-201ENST00000254181 IFI27P40305 119 aaPredicted RBP6.22□□□□□ -1.41
USP29-201ENST00000254181 ZNF718Q3SXZ3 478 aa6.22□□□□□ -1.41
USP29-201ENST00000254181 FAM120AOSQ5T036 256 aa6.22□□□□□ -1.41
USP29-201ENST00000254181 NTN5Q8WTR8 489 aaPredicted RBP6.22□□□□□ -1.41
USP29-201ENST00000254181 RPP21Q9H633 154 aaKnown RBP6.22□□□□□ -1.41
USP29-201ENST00000254181 EXPH5Q8NEV8 1989 aa6.22□□□□□ -1.41
USP29-201ENST00000254181 C5orf63A6NC05 138 aa6.22□□□□□ -1.41
USP29-201ENST00000254181 CDX4O14627 284 aaPredicted RBP6.22□□□□□ -1.41
USP29-201ENST00000254181 TWIST1Q15672 202 aa6.22□□□□□ -1.41
USP29-201ENST00000254181 SFTPA2Q8IWL1 248 aa6.22□□□□□ -1.41
USP29-201ENST00000254181 SFTPA1Q8IWL2 248 aa6.22□□□□□ -1.41
USP29-201ENST00000254181 OR9G1Q8NH87 305 aa6.22□□□□□ -1.41
USP29-201ENST00000254181 FAM57AQ8TBR7 257 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms