RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 COTL1Q14019 142 aa12.41□□□□□ -0.42
DDX55-201ENST00000238146 H1FXQ92522 213 aaKnown RBP12.41□□□□□ -0.42
DDX55-201ENST00000238146 TMUB1Q9BVT8 246 aa12.41□□□□□ -0.42
DDX55-201ENST00000238146 GSX1Q9H4S2 264 aaPredicted RBP12.41□□□□□ -0.42
DDX55-201ENST00000238146 CBY3A6NI87 242 aa12.4□□□□□ -0.42
DDX55-201ENST00000238146 H0Y8G0 127 aa12.4□□□□□ -0.42
DDX55-201ENST00000238146 OVOL3O00110 214 aa12.4□□□□□ -0.42
DDX55-201ENST00000238146 PSG1P11464 419 aa12.4□□□□□ -0.42
DDX55-201ENST00000238146 COL8A1P27658 744 aa12.4□□□□□ -0.42
DDX55-201ENST00000238146 C3orf36Q3SXR2 165 aa12.4□□□□□ -0.42
DDX55-201ENST00000238146 ETFRF1Q6IPR1 90 aa12.4□□□□□ -0.42
DDX55-201ENST00000238146 Q71RC1 249 aaPredicted RBP12.4□□□□□ -0.42
DDX55-201ENST00000238146 CIARTQ8N365 385 aaPredicted RBP12.4□□□□□ -0.42
DDX55-201ENST00000238146 RPRMLQ8N4K4 120 aa12.4□□□□□ -0.42
DDX55-201ENST00000238146 PMCHL2Q9BQD1 86 aa12.4□□□□□ -0.42
DDX55-201ENST00000238146 RNF24Q9Y225 148 aa12.4□□□□□ -0.42
DDX55-201ENST00000238146 HAX1O00165 279 aa12.4□□□□□ -0.42
DDX55-201ENST00000238146 HLA-DRB1P01911 266 aa12.4□□□□□ -0.42
DDX55-201ENST00000238146 RPS20P60866 119 aaKnown RBP12.4□□□□□ -0.42
DDX55-201ENST00000238146 PLA2G2CQ5R387 149 aa12.4□□□□□ -0.42
DDX55-201ENST00000238146 LDLRAD2Q5SZI1 272 aa12.4□□□□□ -0.42
DDX55-201ENST00000238146 AMMECR1LQ6DCA0 310 aa12.4□□□□□ -0.42
DDX55-201ENST00000238146 NEU4Q8WWR8 484 aaPredicted RBP12.4□□□□□ -0.42
DDX55-201ENST00000238146 MS4A6AQ9H2W1 248 aa12.4□□□□□ -0.42
DDX55-201ENST00000238146 CST9LQ9H4G1 147 aa12.4□□□□□ -0.42
DDX55-201ENST00000238146 CFAP47Q6ZTR5 3102 aa12.4□□□□□ -0.43
DDX55-201ENST00000238146 SMG1Q96Q15 3661 aaKnown RBP12.39□□□□□ -0.43
DDX55-201ENST00000238146 A0A087X0K7 114 aa12.39□□□□□ -0.43
DDX55-201ENST00000238146 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.39□□□□□ -0.43
DDX55-201ENST00000238146 IGHV3-21A0A0B4J1V1 117 aa12.39□□□□□ -0.43
DDX55-201ENST00000238146 CSN3P07498 182 aa12.39□□□□□ -0.43
DDX55-201ENST00000238146 SP9P0CG40 484 aa12.39□□□□□ -0.43
DDX55-201ENST00000238146 Q86TA4 180 aa12.39□□□□□ -0.43
DDX55-201ENST00000238146 TMEM186Q96B77 213 aa12.39□□□□□ -0.43
DDX55-201ENST00000238146 PPBPP02775 128 aa12.39□□□□□ -0.43
DDX55-201ENST00000238146 VMA21Q3ZAQ7 101 aa12.39□□□□□ -0.43
DDX55-201ENST00000238146 PVRIGQ6DKI7 326 aa12.39□□□□□ -0.43
DDX55-201ENST00000238146 TMEM116Q8NCL8 245 aa12.39□□□□□ -0.43
DDX55-201ENST00000238146 HSPB8Q9UJY1 196 aa12.39□□□□□ -0.43
DDX55-201ENST00000238146 ABCA1O95477 2261 aa12.39□□□□□ -0.43
DDX55-201ENST00000238146 HIST1H1AQ02539 215 aaPredicted RBP12.38□□□□□ -0.43
DDX55-201ENST00000238146 LINC01545Q5VT33 79 aa12.38□□□□□ -0.43
DDX55-201ENST00000238146 C8orf46Q8TAG6 207 aa12.38□□□□□ -0.43
DDX55-201ENST00000238146 CD5LO43866 347 aa12.38□□□□□ -0.43
DDX55-201ENST00000238146 IGLV2-11P01706 119 aa12.38□□□□□ -0.43
DDX55-201ENST00000238146 APELAP0DMC3 54 aa12.38□□□□□ -0.43
DDX55-201ENST00000238146 FAM71F2Q6NXP2 309 aa12.38□□□□□ -0.43
DDX55-201ENST00000238146 TIMM8BQ9Y5J9 83 aaPredicted RBP12.38□□□□□ -0.43
DDX55-201ENST00000238146 HTR1DP28221 377 aa12.37□□□□□ -0.43
DDX55-201ENST00000238146 PSG9Q00887 426 aa12.37□□□□□ -0.43
DDX55-201ENST00000238146 FOXE3Q13461 319 aa12.37□□□□□ -0.43
DDX55-201ENST00000238146 OCIAD2Q56VL3 154 aa12.37□□□□□ -0.43
DDX55-201ENST00000238146 C16orf54Q6UWD8 224 aa12.37□□□□□ -0.43
DDX55-201ENST00000238146 ZNF785A8K8V0 405 aa12.37□□□□□ -0.43
DDX55-201ENST00000238146 PLP1P60201 277 aa12.37□□□□□ -0.43
DDX55-201ENST00000238146 LINC00311Q8N616 119 aa12.37□□□□□ -0.43
DDX55-201ENST00000238146 FAM215AQ9Y5M1 114 aa12.37□□□□□ -0.43
DDX55-201ENST00000238146 CD40P25942 277 aa12.36□□□□□ -0.43
DDX55-201ENST00000238146 GPR183P32249 361 aa12.36□□□□□ -0.43
DDX55-201ENST00000238146 PRNTQ86SH4 94 aa12.36□□□□□ -0.43
DDX55-201ENST00000238146 OTORQ9NRC9 128 aa12.36□□□□□ -0.43
DDX55-201ENST00000238146 BOD1L1Q8NFC6 3051 aa12.36□□□□□ -0.43
DDX55-201ENST00000238146 IGHV3-72A0A0B4J1Y9 119 aa12.36□□□□□ -0.43
DDX55-201ENST00000238146 TOX4O94842 621 aa12.36□□□□□ -0.43
DDX55-201ENST00000238146 FAM27E3Q08E93 113 aa12.36□□□□□ -0.43
DDX55-201ENST00000238146 C2orf91Q6ZV80 131 aa12.36□□□□□ -0.43
DDX55-201ENST00000238146 GOLT1AQ6ZVE7 132 aa12.36□□□□□ -0.43
DDX55-201ENST00000238146 EXOC3-AS1Q8N2X6 119 aa12.36□□□□□ -0.43
DDX55-201ENST00000238146 TRAV8-6A0A0B4J262 113 aa12.35□□□□□ -0.43
DDX55-201ENST00000238146 ARMS2P0C7Q2 107 aa12.35□□□□□ -0.43
DDX55-201ENST00000238146 ARF6P62330 175 aa12.35□□□□□ -0.43
DDX55-201ENST00000238146 ZNF747Q9BV97 191 aa12.35□□□□□ -0.43
DDX55-201ENST00000238146 AP5S1Q9NUS5 200 aa12.35□□□□□ -0.43
DDX55-201ENST00000238146 HIGD1AQ9Y241 93 aa12.35□□□□□ -0.43
DDX55-201ENST00000238146 ROS1P08922 2347 aa12.35□□□□□ -0.43
DDX55-201ENST00000238146 A0A1B0GUT8 65 aa12.35□□□□□ -0.43
DDX55-201ENST00000238146 ENSAO43768 121 aaKnown RBP12.35□□□□□ -0.43
DDX55-201ENST00000238146 COX8AP10176 69 aa12.35□□□□□ -0.43
DDX55-201ENST00000238146 TNFRSF1AP19438 455 aa12.35□□□□□ -0.43
DDX55-201ENST00000238146 ZADH2Q8N4Q0 377 aa12.35□□□□□ -0.43
DDX55-201ENST00000238146 C8orf31Q8N9H6 132 aa12.35□□□□□ -0.43
DDX55-201ENST00000238146 RP1L1Q8IWN7 2480 aaPredicted RBP12.35□□□□□ -0.43
DDX55-201ENST00000238146 HOXB4P17483 251 aaPredicted RBP12.34□□□□□ -0.43
DDX55-201ENST00000238146 MC5RP33032 325 aa12.34□□□□□ -0.43
DDX55-201ENST00000238146 LGALS7P47929 136 aa12.34□□□□□ -0.43
DDX55-201ENST00000238146 SNAI2O43623 268 aa12.34□□□□□ -0.43
DDX55-201ENST00000238146 NCR2O95944 276 aa12.34□□□□□ -0.43
DDX55-201ENST00000238146 RPL27AP46776 148 aaKnown RBP12.34□□□□□ -0.43
DDX55-201ENST00000238146 LYPD2Q6UXB3 125 aa12.34□□□□□ -0.43
DDX55-201ENST00000238146 SRSF12Q8WXF0 261 aaKnown RBP12.34□□□□□ -0.43
DDX55-201ENST00000238146 VPS25Q9BRG1 176 aa12.34□□□□□ -0.43
DDX55-201ENST00000238146 LYZP61626 148 aa12.34□□□□□ -0.43
DDX55-201ENST00000238146 TEX45Q8NA69 505 aa12.34□□□□□ -0.43
DDX55-201ENST00000238146 ZC2HC1AQ96GY0 325 aa12.34□□□□□ -0.43
DDX55-201ENST00000238146 CNTFRP26992 372 aa12.33□□□□□ -0.44
DDX55-201ENST00000238146 SLC25A39Q9BZJ4 359 aaPredicted RBP12.33□□□□□ -0.44
DDX55-201ENST00000238146 PPIAL4EA0A075B759 164 aa12.33□□□□□ -0.44
DDX55-201ENST00000238146 GAGE12BA1L429 117 aa12.33□□□□□ -0.44
DDX55-201ENST00000238146 C17orf100A8MU93 164 aa12.33□□□□□ -0.44
DDX55-201ENST00000238146 PPIAL4DF5H284 164 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms