RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 RPUSD1Q9UJJ7 312 aaKnown RBP12.7□□□□□ -0.38
UBE3A-227ENST00000638011 A0A1W2PQF6 199 aa12.7□□□□□ -0.38
UBE3A-227ENST00000638011 CMC4P56277 68 aaPredicted RBP12.7□□□□□ -0.38
UBE3A-227ENST00000638011 GLRX5Q86SX6 157 aa12.7□□□□□ -0.38
UBE3A-227ENST00000638011 ATP5G3P48201 142 aa12.69□□□□□ -0.38
UBE3A-227ENST00000638011 SLAQ13239 276 aa12.69□□□□□ -0.38
UBE3A-227ENST00000638011 HAPLN4Q86UW8 402 aa12.69□□□□□ -0.38
UBE3A-227ENST00000638011 LYPD1Q8N2G4 141 aa12.69□□□□□ -0.38
UBE3A-227ENST00000638011 RNF115Q9Y4L5 304 aa12.69□□□□□ -0.38
UBE3A-227ENST00000638011 H3BQ85 93 aa12.69□□□□□ -0.38
UBE3A-227ENST00000638011 VEGFBP49765 207 aa12.69□□□□□ -0.38
UBE3A-227ENST00000638011 ZNF385AQ96PM9 386 aaKnown RBP12.69□□□□□ -0.38
UBE3A-227ENST00000638011 EFNB3Q15768 340 aa12.69□□□□□ -0.38
UBE3A-227ENST00000638011 SPATA25Q9BR10 227 aa12.69□□□□□ -0.38
UBE3A-227ENST00000638011 ADARB2-AS1A8MUL3 147 aa12.68□□□□□ -0.38
UBE3A-227ENST00000638011 PAPPAQ13219 1627 aa12.68□□□□□ -0.38
UBE3A-227ENST00000638011 CCL8P80075 99 aa12.68□□□□□ -0.38
UBE3A-227ENST00000638011 WISP3O95389 354 aaPredicted RBP12.68□□□□□ -0.38
UBE3A-227ENST00000638011 NPC2P61916 151 aa12.68□□□□□ -0.38
UBE3A-227ENST00000638011 C8orf46Q8TAG6 207 aa12.68□□□□□ -0.38
UBE3A-227ENST00000638011 RNF126Q9BV68 326 aa12.68□□□□□ -0.38
UBE3A-227ENST00000638011 PLAC1Q9HBJ0 212 aa12.68□□□□□ -0.38
UBE3A-227ENST00000638011 EGR2P11161 476 aaPredicted RBP12.68□□□□□ -0.38
UBE3A-227ENST00000638011 FOXL2P58012 376 aa12.68□□□□□ -0.38
UBE3A-227ENST00000638011 RFLNBQ8N5W9 214 aa12.68□□□□□ -0.38
UBE3A-227ENST00000638011 CT55Q8WUE5 264 aa12.68□□□□□ -0.38
UBE3A-227ENST00000638011 DSCR8Q96T75 97 aa12.68□□□□□ -0.38
UBE3A-227ENST00000638011 TRBV6-7A0A0A0MS04 114 aa12.68□□□□□ -0.38
UBE3A-227ENST00000638011 TRAV14DV4A0A0A6YYC5 116 aa12.68□□□□□ -0.38
UBE3A-227ENST00000638011 CXCL10P02778 98 aa12.68□□□□□ -0.38
UBE3A-227ENST00000638011 UCNP55089 124 aa12.68□□□□□ -0.38
UBE3A-227ENST00000638011 OVOL1O14753 267 aa12.68□□□□□ -0.38
UBE3A-227ENST00000638011 CACNA1AO00555 2505 aa12.68□□□□□ -0.38
UBE3A-227ENST00000638011 A0A1W2PPE3 182 aa12.68□□□□□ -0.38
UBE3A-227ENST00000638011 HCSTQ9UBK5 93 aa12.68□□□□□ -0.38
UBE3A-227ENST00000638011 LIMS2Q7Z4I7 341 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 KLF14Q8TD94 323 aaPredicted RBP12.67□□□□□ -0.38
UBE3A-227ENST00000638011 SHANK3Q9BYB0 1731 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 B9A039 149 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 CCL3P10147 92 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 SPATA31B1PQ5VZV4 182 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 DCTN5Q9BTE1 182 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 TIMM21Q9BVV7 248 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 TRGV3P03979 118 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 Q0VG73 95 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 RNF125Q96EQ8 232 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 KLHDC3Q9BQ90 382 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 PILRAQ9UKJ1 303 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 PTPRBP23467 1997 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 ZPLD1Q8TCW7 415 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 FOXA2Q9Y261 457 aaPredicted RBP12.67□□□□□ -0.38
UBE3A-227ENST00000638011 FNDC10F2Z333 226 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 LINC01551Q86U37 167 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 C1orf162Q8NEQ5 155 aaPredicted RBP12.67□□□□□ -0.38
UBE3A-227ENST00000638011 SIP14410 1827 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 DSCAMO60469 2012 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 ZIC3O60481 467 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 C1orf210Q8IVY1 113 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 OR11H6Q8NGC7 330 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 OCC1Q8TAD7 63 aa12.67□□□□□ -0.38
UBE3A-227ENST00000638011 FAM231BA6NCW3 169 aa12.66□□□□□ -0.38
UBE3A-227ENST00000638011 MSGN1A6NI15 193 aa12.66□□□□□ -0.38
UBE3A-227ENST00000638011 YPEL1O60688 119 aa12.66□□□□□ -0.38
UBE3A-227ENST00000638011 HLA-DMBP28068 263 aa12.66□□□□□ -0.38
UBE3A-227ENST00000638011 YPEL2Q96QA6 119 aa12.66□□□□□ -0.38
UBE3A-227ENST00000638011 C2CD3Q4AC94 2353 aa12.66□□□□□ -0.38
UBE3A-227ENST00000638011 ACP7Q6ZNF0 438 aa12.66□□□□□ -0.38
UBE3A-227ENST00000638011 LINC00312Q9Y6C7 94 aa12.66□□□□□ -0.38
UBE3A-227ENST00000638011 PCNX3Q9H6A9 2034 aa12.66□□□□□ -0.38
UBE3A-227ENST00000638011 RBM3P98179 157 aaKnown RBP12.66□□□□□ -0.38
UBE3A-227ENST00000638011 K7EP34 96 aa12.66□□□□□ -0.38
UBE3A-227ENST00000638011 LINC00271P0C7V0 271 aa12.66□□□□□ -0.38
UBE3A-227ENST00000638011 SMIM20Q8N5G0 67 aa12.66□□□□□ -0.38
UBE3A-227ENST00000638011 GLI3P10071 1580 aa12.66□□□□□ -0.38
UBE3A-227ENST00000638011 OR13A1Q8NGR1 328 aa12.66□□□□□ -0.38
UBE3A-227ENST00000638011 LINC01587Q99440 93 aa12.66□□□□□ -0.38
UBE3A-227ENST00000638011 DPM3Q9P2X0 92 aa12.66□□□□□ -0.38
UBE3A-227ENST00000638011 A0A1W2PPV9 198 aa12.65□□□□□ -0.38
UBE3A-227ENST00000638011 IGHV2-70P01814 119 aa12.65□□□□□ -0.38
UBE3A-227ENST00000638011 GFI1BQ5VTD9 330 aa12.65□□□□□ -0.38
UBE3A-227ENST00000638011 TRAV8-3A0A0A6YYJ7 113 aa12.65□□□□□ -0.38
UBE3A-227ENST00000638011 D6R8Y8 96 aa12.65□□□□□ -0.38
UBE3A-227ENST00000638011 EGR1P18146 543 aa12.65□□□□□ -0.38
UBE3A-227ENST00000638011 PDE6HQ13956 83 aa12.65□□□□□ -0.38
UBE3A-227ENST00000638011 C1QTNF4Q9BXJ3 329 aa12.65□□□□□ -0.38
UBE3A-227ENST00000638011 ANAPC10Q9UM13 185 aa12.65□□□□□ -0.38
UBE3A-227ENST00000638011 SIVA1O15304 175 aa12.65□□□□□ -0.38
UBE3A-227ENST00000638011 TCTEX1D4Q5JR98 221 aa12.65□□□□□ -0.38
UBE3A-227ENST00000638011 FNDC1Q4ZHG4 1894 aaPredicted RBP12.65□□□□□ -0.38
UBE3A-227ENST00000638011 AZU1P20160 251 aa12.65□□□□□ -0.38
UBE3A-227ENST00000638011 TAL2Q16559 108 aa12.65□□□□□ -0.38
UBE3A-227ENST00000638011 ZIC4Q8N9L1 334 aa12.65□□□□□ -0.38
UBE3A-227ENST00000638011 CEP192Q8TEP8 1941 aa12.65□□□□□ -0.38
UBE3A-227ENST00000638011 ZNF664Q8N3J9 261 aa12.65□□□□□ -0.38
UBE3A-227ENST00000638011 A0A1B0GWJ7 208 aa12.64□□□□□ -0.39
UBE3A-227ENST00000638011 HOXB3P14651 431 aaPredicted RBP12.64□□□□□ -0.39
UBE3A-227ENST00000638011 TTTY12Q9BZ98 90 aa12.64□□□□□ -0.39
UBE3A-227ENST00000638011 CCL1P22362 96 aa12.64□□□□□ -0.39
UBE3A-227ENST00000638011 MIR17HGQ75NE6 70 aa12.64□□□□□ -0.39
UBE3A-227ENST00000638011 PRADC1Q9BSG0 188 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms