RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 ZNRF1Q8ND25 227 aa12.62□□□□□ -0.39
CACNA1A-235ENST00000637004 NDFIP1Q9BT67 221 aa12.62□□□□□ -0.39
CACNA1A-235ENST00000637004 DEFB127Q9H1M4 99 aa12.62□□□□□ -0.39
CACNA1A-235ENST00000637004 EPDR1Q9UM22 224 aa12.62□□□□□ -0.39
CACNA1A-235ENST00000637004 SMG1Q96Q15 3661 aaKnown RBP12.62□□□□□ -0.39
CACNA1A-235ENST00000637004 PIEZO2Q9H5I5 2752 aa12.62□□□□□ -0.39
CACNA1A-235ENST00000637004 CGB3P0DN86 165 aa12.61□□□□□ -0.39
CACNA1A-235ENST00000637004 CGB7P0DN87 165 aa12.61□□□□□ -0.39
CACNA1A-235ENST00000637004 A0A087X0K7 114 aa12.61□□□□□ -0.39
CACNA1A-235ENST00000637004 TRAV8-6A0A0B4J262 113 aa12.61□□□□□ -0.39
CACNA1A-235ENST00000637004 IGLC1P0CG04 106 aa12.61□□□□□ -0.39
CACNA1A-235ENST00000637004 SEC11AP67812 179 aa12.61□□□□□ -0.39
CACNA1A-235ENST00000637004 C17orf58Q2M2W7 97 aa12.61□□□□□ -0.39
CACNA1A-235ENST00000637004 FXYD5Q96DB9 178 aa12.61□□□□□ -0.39
CACNA1A-235ENST00000637004 ZNF835Q9Y2P0 537 aa12.61□□□□□ -0.39
CACNA1A-235ENST00000637004 TRGV5A0A0B4J1U4 118 aa12.61□□□□□ -0.39
CACNA1A-235ENST00000637004 KBTBD11-OT1A0A1B0GTJ5 212 aa12.61□□□□□ -0.39
CACNA1A-235ENST00000637004 P01737 135 aa12.61□□□□□ -0.39
CACNA1A-235ENST00000637004 ERHP84090 104 aaKnown RBP12.61□□□□□ -0.39
CACNA1A-235ENST00000637004 Q6ZT83 130 aa12.61□□□□□ -0.39
CACNA1A-235ENST00000637004 PDPNQ86YL7 162 aa12.61□□□□□ -0.39
CACNA1A-235ENST00000637004 STXBP6Q8NFX7 210 aa12.61□□□□□ -0.39
CACNA1A-235ENST00000637004 OR2Z1Q8NG97 314 aa12.61□□□□□ -0.39
CACNA1A-235ENST00000637004 PRSS22Q9GZN4 317 aa12.61□□□□□ -0.39
CACNA1A-235ENST00000637004 GFRA4Q9GZZ7 299 aa12.61□□□□□ -0.39
CACNA1A-235ENST00000637004 KLF12Q9Y4X4 402 aa12.61□□□□□ -0.39
CACNA1A-235ENST00000637004 C7orf71A4D174 169 aa12.6□□□□□ -0.39
CACNA1A-235ENST00000637004 C22orf46C9J442 243 aa12.6□□□□□ -0.39
CACNA1A-235ENST00000637004 CHEK1O14757 476 aa12.6□□□□□ -0.39
CACNA1A-235ENST00000637004 SLC25A5P05141 298 aaKnown RBP12.6□□□□□ -0.39
CACNA1A-235ENST00000637004 CFHR2P36980 270 aa12.6□□□□□ -0.39
CACNA1A-235ENST00000637004 MYCNOSP40205 109 aa12.6□□□□□ -0.39
CACNA1A-235ENST00000637004 UTF1Q5T230 341 aa12.6□□□□□ -0.39
CACNA1A-235ENST00000637004 MBNL2Q5VZF2 373 aaKnown RBP12.6□□□□□ -0.39
CACNA1A-235ENST00000637004 ZNF841Q6ZN19 808 aa12.6□□□□□ -0.39
CACNA1A-235ENST00000637004 NBEAQ8NFP9 2946 aa12.6□□□□□ -0.39
CACNA1A-235ENST00000637004 GAGE10A6NGK3 116 aa12.6□□□□□ -0.39
CACNA1A-235ENST00000637004 AGFG2O95081 481 aa12.6□□□□□ -0.39
CACNA1A-235ENST00000637004 COX8AP10176 69 aa12.6□□□□□ -0.39
CACNA1A-235ENST00000637004 GNG5P63218 68 aa12.6□□□□□ -0.39
CACNA1A-235ENST00000637004 RBPMS2Q6ZRY4 209 aaKnown RBP12.6□□□□□ -0.39
CACNA1A-235ENST00000637004 GTF2H5Q6ZYL4 71 aa12.6□□□□□ -0.39
CACNA1A-235ENST00000637004 BPIFA4PQ86YQ2 179 aa12.6□□□□□ -0.39
CACNA1A-235ENST00000637004 SCNM1Q9BWG6 230 aa12.6□□□□□ -0.39
CACNA1A-235ENST00000637004 IGHV3OR15-7A0A075B7D8 119 aa12.59□□□□□ -0.39
CACNA1A-235ENST00000637004 LOC102724200A0A096LPH7 203 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-235ENST00000637004 PGLYRP4Q96LB8 373 aa12.59□□□□□ -0.39
CACNA1A-235ENST00000637004 MLST8Q9BVC4 326 aa12.59□□□□□ -0.39
CACNA1A-235ENST00000637004 MEGF9Q9H1U4 602 aa12.59□□□□□ -0.39
CACNA1A-235ENST00000637004 ZNF492Q9P255 531 aa12.59□□□□□ -0.39
CACNA1A-235ENST00000637004 SPRR3Q9UBC9 169 aa12.59□□□□□ -0.39
CACNA1A-235ENST00000637004 FAM231BA6NCW3 169 aa12.59□□□□□ -0.39
CACNA1A-235ENST00000637004 RNFT1Q5M7Z0 435 aa12.59□□□□□ -0.39
CACNA1A-235ENST00000637004 LINC01545Q5VT33 79 aa12.59□□□□□ -0.39
CACNA1A-235ENST00000637004 DAZAP1Q96EP5 407 aaKnown RBP12.59□□□□□ -0.39
CACNA1A-235ENST00000637004 SRRM4A7MD48 611 aaKnown RBP12.58□□□□□ -0.4
CACNA1A-235ENST00000637004 IGKV1-16P04430 117 aa12.58□□□□□ -0.4
CACNA1A-235ENST00000637004 GTSF1Q8WW33 167 aa12.58□□□□□ -0.4
CACNA1A-235ENST00000637004 AP1S3Q96PC3 154 aa12.58□□□□□ -0.4
CACNA1A-235ENST00000637004 TCRBV4S1A1TA0A5B7 111 aa12.58□□□□□ -0.4
CACNA1A-235ENST00000637004 CECR9P0C854 216 aa12.58□□□□□ -0.4
CACNA1A-235ENST00000637004 ARF6P62330 175 aa12.58□□□□□ -0.4
CACNA1A-235ENST00000637004 PATE2Q6UY27 113 aa12.58□□□□□ -0.4
CACNA1A-235ENST00000637004 OR10W1Q8NGF6 305 aa12.58□□□□□ -0.4
CACNA1A-235ENST00000637004 SAA1P0DJI8 122 aaPredicted RBP12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 HTR1DP28221 377 aa12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 TMEM177Q53S58 311 aa12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 PRR31Q5SQ13 230 aa12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 RBMXL3Q8N7X1 1067 aaKnown RBP12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 MDS2Q8NDY4 140 aa12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 FMC1Q96HJ9 113 aa12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 PGPA6NDG6 321 aa12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 H0Y8G0 127 aa12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 MOSP00540 346 aa12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 APOA2P02652 100 aa12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 CD24P25063 80 aa12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 TMEM97Q5BJF2 176 aa12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 NDUFA4L2Q9NRX3 87 aa12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 C19orf71A6NCJ1 209 aa12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 INS-IGF2F8WCM5 200 aa12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 CT45A6P0DMU7 189 aa12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 CT45A5P0DMU8 189 aa12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 CT45A7P0DMV0 189 aa12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 ZNF137PP52743 207 aa12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 LINC00305Q7Z4B0 112 aa12.57□□□□□ -0.4
CACNA1A-235ENST00000637004 C1orf162Q8NEQ5 155 aaPredicted RBP12.56□□□□□ -0.4
CACNA1A-235ENST00000637004 NPIPB3Q92617 1050 aa12.56□□□□□ -0.4
CACNA1A-235ENST00000637004 SGK494Q96LW2 274 aa12.56□□□□□ -0.4
CACNA1A-235ENST00000637004 FSTL3O95633 263 aa12.56□□□□□ -0.4
CACNA1A-235ENST00000637004 LINC00322Q6ZN03 302 aaPredicted RBP12.56□□□□□ -0.4
CACNA1A-235ENST00000637004 C2orf91Q6ZV80 131 aa12.56□□□□□ -0.4
CACNA1A-235ENST00000637004 FER1L6-AS1Q8NA97 138 aa12.56□□□□□ -0.4
CACNA1A-235ENST00000637004 OSR1Q8TAX0 266 aaPredicted RBP12.56□□□□□ -0.4
CACNA1A-235ENST00000637004 PERPQ96FX8 193 aa12.56□□□□□ -0.4
CACNA1A-235ENST00000637004 ZFYVE26Q68DK2 2539 aa12.55□□□□□ -0.4
CACNA1A-235ENST00000637004 A6NDN8 102 aa12.55□□□□□ -0.4
CACNA1A-235ENST00000637004 LTAP01374 205 aa12.55□□□□□ -0.4
CACNA1A-235ENST00000637004 SUB1P53999 127 aaKnown RBP eCLIP12.55□□□□□ -0.4
CACNA1A-235ENST00000637004 TMEM30BQ3MIR4 351 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms