RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 TRBV20OR9-2A0A075B6H5 130 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 LOC102723996A0A087X1L8 192 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 RBP4P02753 201 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 MT-ATP8P03928 68 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 SCTP09683 121 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 NEGR1Q7Z3B1 354 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 JMJD8Q96S16 334 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 SMIM27A0A1W2PRY6 76 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 C2CD4DB7Z1M9 353 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 DUSP14O95147 198 aaKnown RBP4.14□□□□□ -1.75
VPS13D-213ENST00000613099 FGF12P61328 243 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 PDCD1Q15116 288 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 HAPLN4Q86UW8 402 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 PLXNB1O43157 2135 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 C3orf36Q3SXR2 165 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 SPATA25Q9BR10 227 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 P2RY2P41231 377 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 Q6ZS92 163 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 OTORQ9NRC9 128 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 FOXI3A8MTJ6 420 aaPredicted RBP4.14□□□□□ -1.75
VPS13D-213ENST00000613099 SHISA9B4DS77 424 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 ZNF146Q15072 292 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 GCSAMQ8N6F7 178 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 IDI2-AS1Q9NZ38 188 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 CSDC2Q9Y534 153 aaKnown RBP4.14□□□□□ -1.75
VPS13D-213ENST00000613099 COL5A1P20908 1838 aaPredicted RBP4.14□□□□□ -1.75
VPS13D-213ENST00000613099 A0A1W2PP55 124 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 GATA3P23771 443 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 DYNLRB2Q8TF09 96 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 PAX1P15863 534 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 SSR4P51571 173 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 C2orf27AQ580R0 203 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 FOXQ1Q9C009 403 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 SCRT2Q9NQ03 307 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 NPIPB6E9PJ23 425 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 LAMTOR5O43504 91 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 GTSCR1Q86UQ5 136 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 C1orf162Q8NEQ5 155 aaPredicted RBP4.14□□□□□ -1.75
VPS13D-213ENST00000613099 PRO1854Q9UHT4 67 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 K7ERJ3 54 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 SLC25A20O43772 301 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 LYZL6O75951 148 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 PLEKHB2Q96CS7 222 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 ASCL2Q99929 193 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 CPAMD8Q8IZJ3 1885 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 PRSS38A1L453 326 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 LGALS9BQ3B8N2 356 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 PRR30Q53SZ7 412 aaPredicted RBP4.13□□□□□ -1.75
VPS13D-213ENST00000613099 LGALS9CQ6DKI2 356 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 SLC37A2Q8TED4 501 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 OTOGLQ3ZCN5 2332 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 IGLV1-36A0A0B4J1U3 117 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 TMEM213A2RRL7 107 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 UPK2O00526 184 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 CD27P26842 260 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 TMEM170BQ5T4T1 132 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 RBM3P98179 157 aaKnown RBP4.13□□□□□ -1.75
VPS13D-213ENST00000613099 C8orf46Q8TAG6 207 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 DEFB108AA8MXU0 73 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 CD3EP07766 207 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 RPL11P62913 178 aaKnown RBP4.13□□□□□ -1.75
VPS13D-213ENST00000613099 OR13A1Q8NGR1 328 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 RFESDQ8TAC1 157 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 A0A1B0GX78 115 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 NPFFO15130 113 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 ATP5J2P56134 94 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 PCSK4Q6UW60 755 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 RNF182Q8N6D2 247 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 TNFSF14O43557 240 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 B4GALT1P15291 398 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 CXCL12P48061 93 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 ODF1Q14990 250 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 TEX45Q8NA69 505 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 ZNF721Q8TF20 911 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 TRAV25A0A0B4J276 109 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 TMEM229AB2RXF0 380 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 SYNJ2BPP57105 145 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 OR11H6Q8NGC7 330 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 SYNGR3O43761 229 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 TNFAIP6P98066 277 aaPredicted RBP4.13□□□□□ -1.75
VPS13D-213ENST00000613099 AMTNQ6UX39 209 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 HOXB2P14652 356 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 SEC61GP60059 68 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 Q6ZSR6 202 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 GOLT1AQ6ZVE7 132 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 SMRP1Q8NCR6 262 aa4.13□□□□□ -1.75
VPS13D-213ENST00000613099 SMIM9A6NGZ8 99 aa4.12□□□□□ -1.75
VPS13D-213ENST00000613099 SPACA3Q8IXA5 215 aa4.12□□□□□ -1.75
VPS13D-213ENST00000613099 FREM1Q5H8C1 2179 aa4.12□□□□□ -1.75
VPS13D-213ENST00000613099 KNCNA6PVL3 124 aa4.12□□□□□ -1.75
VPS13D-213ENST00000613099 FSTL3O95633 263 aa4.12□□□□□ -1.75
VPS13D-213ENST00000613099 GATA2P23769 480 aaPredicted RBP4.12□□□□□ -1.75
VPS13D-213ENST00000613099 IL15RAQ13261 267 aa4.12□□□□□ -1.75
VPS13D-213ENST00000613099 FAM27BQ5VT28 67 aa4.12□□□□□ -1.75
VPS13D-213ENST00000613099 PRDX2P32119 198 aa4.12□□□□□ -1.75
VPS13D-213ENST00000613099 SRSF8Q9BRL6 282 aaKnown RBP4.12□□□□□ -1.75
VPS13D-213ENST00000613099 ABCA2Q9BZC7 2435 aa4.12□□□□□ -1.75
VPS13D-213ENST00000613099 IL9P15248 144 aa4.12□□□□□ -1.75
VPS13D-213ENST00000613099 HERVK_113P63121 156 aa4.12□□□□□ -1.75
VPS13D-213ENST00000613099 PYYP10082 97 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms