RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 OVOL1O14753 267 aa9.77□□□□□ -0.84
SCN8A-208ENST00000599343 GAGE2BQ13066 116 aa9.77□□□□□ -0.84
SCN8A-208ENST00000599343 LYZL1Q6UWQ5 148 aa9.77□□□□□ -0.84
SCN8A-208ENST00000599343 TMEM219Q86XT9 240 aa9.77□□□□□ -0.84
SCN8A-208ENST00000599343 A0A087X0K7 114 aa9.77□□□□□ -0.85
SCN8A-208ENST00000599343 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.77□□□□□ -0.85
SCN8A-208ENST00000599343 GUSBP1Q15486 140 aa9.77□□□□□ -0.85
SCN8A-208ENST00000599343 RNASE6Q93091 150 aaKnown RBP9.77□□□□□ -0.85
SCN8A-208ENST00000599343 RCHY1Q96PM5 261 aa9.77□□□□□ -0.85
SCN8A-208ENST00000599343 CSRP2Q16527 193 aa9.77□□□□□ -0.85
SCN8A-208ENST00000599343 GGTLC1Q9BX51 225 aa9.77□□□□□ -0.85
SCN8A-208ENST00000599343 LAMTOR3Q9UHA4 124 aa9.77□□□□□ -0.85
SCN8A-208ENST00000599343 COL4A1P02462 1669 aa9.77□□□□□ -0.85
SCN8A-208ENST00000599343 ADAMTS7Q9UKP4 1686 aa9.77□□□□□ -0.85
SCN8A-208ENST00000599343 MTCL1Q9Y4B5 1905 aaKnown RBP9.77□□□□□ -0.85
SCN8A-208ENST00000599343 RTTNQ86VV8 2226 aa9.77□□□□□ -0.85
SCN8A-208ENST00000599343 TRAV8-1A0A0A6YYK1 113 aa9.77□□□□□ -0.85
SCN8A-208ENST00000599343 NDUFS8O00217 210 aa9.77□□□□□ -0.85
SCN8A-208ENST00000599343 KLRD1Q13241 179 aa9.77□□□□□ -0.85
SCN8A-208ENST00000599343 ZNF124Q15973 351 aa9.77□□□□□ -0.85
SCN8A-208ENST00000599343 ZNF876PQ49A33 203 aa9.77□□□□□ -0.85
SCN8A-208ENST00000599343 TMEM238C9JI98 176 aa9.76□□□□□ -0.85
SCN8A-208ENST00000599343 SELLP14151 372 aa9.76□□□□□ -0.85
SCN8A-208ENST00000599343 MRPL14Q6P1L8 145 aaKnown RBP9.76□□□□□ -0.85
SCN8A-208ENST00000599343 ZNF625Q96I27 306 aaPredicted RBP9.76□□□□□ -0.85
SCN8A-208ENST00000599343 MS4A6AQ9H2W1 248 aa9.76□□□□□ -0.85
SCN8A-208ENST00000599343 ATAD5Q96QE3 1844 aa9.76□□□□□ -0.85
SCN8A-208ENST00000599343 LURAP1LQ8IV03 231 aa9.76□□□□□ -0.85
SCN8A-208ENST00000599343 IGKV1-12A0A0C4DH73 117 aa9.76□□□□□ -0.85
SCN8A-208ENST00000599343 COLCA2A8K830 154 aa9.76□□□□□ -0.85
SCN8A-208ENST00000599343 LYPD3O95274 346 aa9.76□□□□□ -0.85
SCN8A-208ENST00000599343 IGKV1D-12P01611 117 aa9.76□□□□□ -0.85
SCN8A-208ENST00000599343 IGHV1-46P01743 117 aa9.76□□□□□ -0.85
SCN8A-208ENST00000599343 CITED2Q99967 270 aaPredicted RBP9.76□□□□□ -0.85
SCN8A-208ENST00000599343 MESP1Q9BRJ9 268 aa9.76□□□□□ -0.85
SCN8A-208ENST00000599343 MBNL3Q9NUK0 354 aaKnown RBP9.76□□□□□ -0.85
SCN8A-208ENST00000599343 MRPS18CQ9Y3D5 142 aaKnown RBP9.76□□□□□ -0.85
SCN8A-208ENST00000599343 WNT2P09544 360 aa9.76□□□□□ -0.85
SCN8A-208ENST00000599343 NDPQ00604 133 aa9.76□□□□□ -0.85
SCN8A-208ENST00000599343 LCN12Q6JVE5 192 aa9.76□□□□□ -0.85
SCN8A-208ENST00000599343 TRAV41A0A0B4J266 112 aa9.76□□□□□ -0.85
SCN8A-208ENST00000599343 IGFL4Q6B9Z1 124 aa9.76□□□□□ -0.85
SCN8A-208ENST00000599343 MGST2Q99735 147 aa9.76□□□□□ -0.85
SCN8A-208ENST00000599343 SLC25A39Q9BZJ4 359 aaPredicted RBP9.76□□□□□ -0.85
SCN8A-208ENST00000599343 CD5P06127 495 aa9.75□□□□□ -0.85
SCN8A-208ENST00000599343 PSG1P11464 419 aa9.75□□□□□ -0.85
SCN8A-208ENST00000599343 TMEM249Q2WGJ8 235 aa9.75□□□□□ -0.85
SCN8A-208ENST00000599343 BMPERQ8N8U9 685 aa9.75□□□□□ -0.85
SCN8A-208ENST00000599343 TNFRSF6BO95407 300 aa9.75□□□□□ -0.85
SCN8A-208ENST00000599343 TMEM256Q8N2U0 113 aa9.75□□□□□ -0.85
SCN8A-208ENST00000599343 TRAV3A0A0B4J244 114 aa9.75□□□□□ -0.85
SCN8A-208ENST00000599343 C15orf32Q32M92 178 aa9.75□□□□□ -0.85
SCN8A-208ENST00000599343 Q8TAT8 98 aa9.75□□□□□ -0.85
SCN8A-208ENST00000599343 VMO1Q7Z5L0 202 aa9.75□□□□□ -0.85
SCN8A-208ENST00000599343 C5orf24Q7Z6I8 188 aa9.75□□□□□ -0.85
SCN8A-208ENST00000599343 MCRIP2Q9BUT9 160 aaKnown RBP9.75□□□□□ -0.85
SCN8A-208ENST00000599343 J3QRE1 110 aa9.75□□□□□ -0.85
SCN8A-208ENST00000599343 SH2D1AO60880 128 aa9.75□□□□□ -0.85
SCN8A-208ENST00000599343 SAP30O75446 220 aa9.75□□□□□ -0.85
SCN8A-208ENST00000599343 PRADC1Q9BSG0 188 aa9.75□□□□□ -0.85
SCN8A-208ENST00000599343 COL11A1P12107 1806 aaPredicted RBP9.75□□□□□ -0.85
SCN8A-208ENST00000599343 IGHV2-26A0A0B4J1V2 119 aa9.74□□□□□ -0.85
SCN8A-208ENST00000599343 FAM90A9PA6NNJ1 464 aa9.74□□□□□ -0.85
SCN8A-208ENST00000599343 DTX2Q86UW9 622 aa9.74□□□□□ -0.85
SCN8A-208ENST00000599343 CYTL1Q9NRR1 136 aa9.74□□□□□ -0.85
SCN8A-208ENST00000599343 FBLN5Q9UBX5 448 aa9.74□□□□□ -0.85
SCN8A-208ENST00000599343 SMPXQ9UHP9 88 aa9.74□□□□□ -0.85
SCN8A-208ENST00000599343 LGALS1P09382 135 aaKnown RBP9.74□□□□□ -0.85
SCN8A-208ENST00000599343 FOXG1P55316 489 aaPredicted RBP9.74□□□□□ -0.85
SCN8A-208ENST00000599343 C2orf82Q6UX34 121 aa9.74□□□□□ -0.85
SCN8A-208ENST00000599343 EDA2RQ9HAV5 297 aa9.74□□□□□ -0.85
SCN8A-208ENST00000599343 POLR2AP24928 1970 aaKnown RBP9.74□□□□□ -0.85
SCN8A-208ENST00000599343 A0A087WX48 190 aa9.74□□□□□ -0.85
SCN8A-208ENST00000599343 TRGV1A0A0A0MS02 117 aa9.74□□□□□ -0.85
SCN8A-208ENST00000599343 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.74□□□□□ -0.85
SCN8A-208ENST00000599343 SMKR1H3BMG3 65 aa9.74□□□□□ -0.85
SCN8A-208ENST00000599343 CDK2AP2O75956 126 aa9.74□□□□□ -0.85
SCN8A-208ENST00000599343 RPL35AP18077 110 aaKnown RBP9.74□□□□□ -0.85
SCN8A-208ENST00000599343 MPZP25189 248 aa9.74□□□□□ -0.85
SCN8A-208ENST00000599343 FOXF2Q12947 444 aa9.74□□□□□ -0.85
SCN8A-208ENST00000599343 UBE2DNLQ8IWF7 75 aa9.74□□□□□ -0.85
SCN8A-208ENST00000599343 RPUSD1Q9UJJ7 312 aaKnown RBP9.74□□□□□ -0.85
SCN8A-208ENST00000599343 CEP250Q9BV73 2442 aa9.74□□□□□ -0.85
SCN8A-208ENST00000599343 TRBV24-1A0A075B6N3 115 aa9.73□□□□□ -0.85
SCN8A-208ENST00000599343 SLC25A48Q6ZT89 311 aaKnown RBP9.73□□□□□ -0.85
SCN8A-208ENST00000599343 ZNF138P52744 262 aa9.73□□□□□ -0.85
SCN8A-208ENST00000599343 TEX43Q6ZNM6 134 aa9.73□□□□□ -0.85
SCN8A-208ENST00000599343 LCNL1Q6ZST4 164 aa9.73□□□□□ -0.85
SCN8A-208ENST00000599343 GTF3AQ92664 365 aaKnown RBP9.73□□□□□ -0.85
SCN8A-208ENST00000599343 AGMATQ9BSE5 352 aa9.73□□□□□ -0.85
SCN8A-208ENST00000599343 COL4A5P29400 1685 aa9.73□□□□□ -0.85
SCN8A-208ENST00000599343 TRAV8-3A0A0A6YYJ7 113 aa9.73□□□□□ -0.85
SCN8A-208ENST00000599343 SRRM4A7MD48 611 aaKnown RBP9.73□□□□□ -0.85
SCN8A-208ENST00000599343 ACTL10Q5JWF8 245 aa9.73□□□□□ -0.85
SCN8A-208ENST00000599343 TMEM200BQ69YZ2 307 aa9.73□□□□□ -0.85
SCN8A-208ENST00000599343 NUP35Q8NFH5 326 aa9.73□□□□□ -0.85
SCN8A-208ENST00000599343 GTSF1LQ9H1H1 148 aa9.73□□□□□ -0.85
SCN8A-208ENST00000599343 SSBP2P81877 361 aaPredicted RBP9.73□□□□□ -0.85
SCN8A-208ENST00000599343 KLF17Q5JT82 389 aaPredicted RBP9.73□□□□□ -0.85
SCN8A-208ENST00000599343 TPTE2P1Q5T6R2 138 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms