RNA–Protein interactions for RNA: ENST00000589144.5

SUGP1-210, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 1 (best)

Gene SUGP1, Length 2,066 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-210ENST00000589144 SSBP3Q9BWW4 388 aaPredicted RBP13.38□□□□□ -0.27
SUGP1-210ENST00000589144 COL6A3P12111 3177 aa13.38□□□□□ -0.27
SUGP1-210ENST00000589144 MGST3O14880 152 aa13.37□□□□□ -0.27
SUGP1-210ENST00000589144 IGHV3-9P01782 118 aa13.37□□□□□ -0.27
SUGP1-210ENST00000589144 SNRNP40Q96DI7 357 aaKnown RBP13.37□□□□□ -0.27
SUGP1-210ENST00000589144 PRELID3AQ96N28 172 aa13.37□□□□□ -0.27
SUGP1-210ENST00000589144 LSM4Q9Y4Z0 139 aaKnown RBP13.37□□□□□ -0.27
SUGP1-210ENST00000589144 G6PCP35575 357 aa13.36□□□□□ -0.27
SUGP1-210ENST00000589144 ERVK11-1P61568 191 aa13.36□□□□□ -0.27
SUGP1-210ENST00000589144 SRSF1Q07955 248 aaKnown RBP eCLIP13.36□□□□□ -0.27
SUGP1-210ENST00000589144 MOGAT3Q86VF5 341 aa13.36□□□□□ -0.27
SUGP1-210ENST00000589144 BCL6BQ8N143 479 aaPredicted RBP13.36□□□□□ -0.27
SUGP1-210ENST00000589144 ZDHHC16Q969W1 377 aa13.36□□□□□ -0.27
SUGP1-210ENST00000589144 FAM173AQ9BQD7 235 aa13.36□□□□□ -0.27
SUGP1-210ENST00000589144 ZNF355PQ9NSJ1 428 aa13.36□□□□□ -0.27
SUGP1-210ENST00000589144 MUC3AQ02505 3323 aa13.36□□□□□ -0.27
SUGP1-210ENST00000589144 DOCK10Q96BY6 2186 aa13.36□□□□□ -0.27
SUGP1-210ENST00000589144 PCSK5Q92824 1860 aa13.36□□□□□ -0.27
SUGP1-210ENST00000589144 HIGD1CA8MV81 97 aa13.36□□□□□ -0.27
SUGP1-210ENST00000589144 PRSS46E5RG02 174 aa13.36□□□□□ -0.27
SUGP1-210ENST00000589144 RHODO00212 210 aa13.36□□□□□ -0.27
SUGP1-210ENST00000589144 CAMPP49913 170 aa13.36□□□□□ -0.27
SUGP1-210ENST00000589144 FGF12P61328 243 aa13.36□□□□□ -0.27
SUGP1-210ENST00000589144 PSG5Q15238 335 aa13.36□□□□□ -0.27
SUGP1-210ENST00000589144 A0A1B0GWB2 263 aa13.35□□□□□ -0.27
SUGP1-210ENST00000589144 TCRBV4S1A1TA0A5B7 111 aa13.35□□□□□ -0.27
SUGP1-210ENST00000589144 PRSS29PA6NIE9 313 aa13.35□□□□□ -0.27
SUGP1-210ENST00000589144 A8MWL6 223 aa13.35□□□□□ -0.27
SUGP1-210ENST00000589144 M0QXV9 152 aa13.35□□□□□ -0.27
SUGP1-210ENST00000589144 FOXH1O75593 365 aa13.35□□□□□ -0.27
SUGP1-210ENST00000589144 FOXA3P55318 350 aaPredicted RBP13.35□□□□□ -0.27
SUGP1-210ENST00000589144 OR9G1Q8NH87 305 aa13.35□□□□□ -0.27
SUGP1-210ENST00000589144 PTH2Q96A98 100 aa13.35□□□□□ -0.27
SUGP1-210ENST00000589144 FAM90A27PA6NNH2 459 aa13.35□□□□□ -0.27
SUGP1-210ENST00000589144 SRYQ05066 204 aa13.35□□□□□ -0.27
SUGP1-210ENST00000589144 CSN1S1P47710 185 aa13.34□□□□□ -0.27
SUGP1-210ENST00000589144 RPS16P62249 146 aaKnown RBP13.34□□□□□ -0.27
SUGP1-210ENST00000589144 Q6P435 159 aa13.34□□□□□ -0.27
SUGP1-210ENST00000589144 TMUB1Q9BVT8 246 aa13.34□□□□□ -0.27
SUGP1-210ENST00000589144 GGTLC3B5MD39 225 aa13.33□□□□□ -0.27
SUGP1-210ENST00000589144 ZNF883P0CG24 379 aa13.33□□□□□ -0.27
SUGP1-210ENST00000589144 GCSHP23434 173 aa13.33□□□□□ -0.27
SUGP1-210ENST00000589144 PLP2Q04941 152 aa13.33□□□□□ -0.27
SUGP1-210ENST00000589144 LPAL2Q16609 132 aa13.33□□□□□ -0.27
SUGP1-210ENST00000589144 TMEM178AQ8NBL3 297 aa13.33□□□□□ -0.27
SUGP1-210ENST00000589144 C1orf159Q96HA4 380 aa13.33□□□□□ -0.27
SUGP1-210ENST00000589144 ZDBF2Q9HCK1 2354 aa13.33□□□□□ -0.28
SUGP1-210ENST00000589144 A0A096LPE4 126 aa13.33□□□□□ -0.28
SUGP1-210ENST00000589144 A0A1W2PPZ6 126 aa13.33□□□□□ -0.28
SUGP1-210ENST00000589144 C5orf49A4QMS7 147 aa13.33□□□□□ -0.28
SUGP1-210ENST00000589144 FNDC10F2Z333 226 aa13.33□□□□□ -0.28
SUGP1-210ENST00000589144 CCDC179H3BU77 68 aa13.33□□□□□ -0.28
SUGP1-210ENST00000589144 K7ERJ3 54 aa13.33□□□□□ -0.28
SUGP1-210ENST00000589144 NDUFV3P56181 108 aaKnown RBP13.33□□□□□ -0.28
SUGP1-210ENST00000589144 C20orf204Q6ZNR8 217 aa13.33□□□□□ -0.28
SUGP1-210ENST00000589144 TUSC5Q8IXB3 177 aa13.33□□□□□ -0.28
SUGP1-210ENST00000589144 DRAM1Q8N682 238 aa13.33□□□□□ -0.28
SUGP1-210ENST00000589144 TMEM105Q8N8V8 129 aa13.33□□□□□ -0.28
SUGP1-210ENST00000589144 ZBTB34Q8NCN2 500 aa13.33□□□□□ -0.28
SUGP1-210ENST00000589144 NRGNQ92686 78 aa13.33□□□□□ -0.28
SUGP1-210ENST00000589144 SPRY4Q9C004 299 aa13.33□□□□□ -0.28
SUGP1-210ENST00000589144 C7orf69Q9H7B7 122 aa13.33□□□□□ -0.28
SUGP1-210ENST00000589144 TMEM8BA6NDV4 472 aa13.32□□□□□ -0.28
SUGP1-210ENST00000589144 BCL3P20749 454 aa13.32□□□□□ -0.28
SUGP1-210ENST00000589144 PRTN3P24158 256 aa13.32□□□□□ -0.28
SUGP1-210ENST00000589144 DIAPH2-AS1Q14236 149 aa13.32□□□□□ -0.28
SUGP1-210ENST00000589144 CFAP126Q5VTH2 177 aa13.32□□□□□ -0.28
SUGP1-210ENST00000589144 PCP2Q8IVA1 136 aa13.32□□□□□ -0.28
SUGP1-210ENST00000589144 TMEM116Q8NCL8 245 aa13.32□□□□□ -0.28
SUGP1-210ENST00000589144 TRAV25A0A0B4J276 109 aa13.32□□□□□ -0.28
SUGP1-210ENST00000589144 NPIPB5A8MRT5 1133 aa13.32□□□□□ -0.28
SUGP1-210ENST00000589144 LINC00596Q86U02 117 aa13.32□□□□□ -0.28
SUGP1-210ENST00000589144 NFE4Q86UQ8 179 aa13.32□□□□□ -0.28
SUGP1-210ENST00000589144 ABHD12Q8N2K0 398 aa13.32□□□□□ -0.28
SUGP1-210ENST00000589144 PPDPFQ9H3Y8 114 aa13.32□□□□□ -0.28
SUGP1-210ENST00000589144 CT83Q5H943 113 aa13.31□□□□□ -0.28
SUGP1-210ENST00000589144 Q6Q795 121 aa13.31□□□□□ -0.28
SUGP1-210ENST00000589144 WDR31Q8NA23 367 aa13.31□□□□□ -0.28
SUGP1-210ENST00000589144 SLC25A33Q9BSK2 321 aa13.31□□□□□ -0.28
SUGP1-210ENST00000589144 FREM1Q5H8C1 2179 aa13.31□□□□□ -0.28
SUGP1-210ENST00000589144 SLC25A5P05141 298 aaKnown RBP13.3□□□□□ -0.28
SUGP1-210ENST00000589144 MAGEA5P43359 124 aa13.3□□□□□ -0.28
SUGP1-210ENST00000589144 MEOX1P50221 254 aa13.3□□□□□ -0.28
SUGP1-210ENST00000589144 EIF4EBP1Q13541 118 aaPredicted RBP13.3□□□□□ -0.28
SUGP1-210ENST00000589144 OR1C1Q15619 314 aa13.3□□□□□ -0.28
SUGP1-210ENST00000589144 CEND1Q8N111 149 aa13.3□□□□□ -0.28
SUGP1-210ENST00000589144 DEFB123Q8N688 67 aa13.3□□□□□ -0.28
SUGP1-210ENST00000589144 HES7Q9BYE0 225 aa13.3□□□□□ -0.28
SUGP1-210ENST00000589144 TTTY12Q9BZ98 90 aa13.3□□□□□ -0.28
SUGP1-210ENST00000589144 AP5S1Q9NUS5 200 aa13.3□□□□□ -0.28
SUGP1-210ENST00000589144 CSDC2Q9Y534 153 aaKnown RBP13.3□□□□□ -0.28
SUGP1-210ENST00000589144 NPIPB6E9PJ23 425 aa13.3□□□□□ -0.28
SUGP1-210ENST00000589144 SMCPP49901 116 aaPredicted RBP13.3□□□□□ -0.28
SUGP1-210ENST00000589144 PRR20EP86478 221 aa13.3□□□□□ -0.28
SUGP1-210ENST00000589144 PRR20CP86479 221 aa13.3□□□□□ -0.28
SUGP1-210ENST00000589144 PRR20DP86480 221 aa13.3□□□□□ -0.28
SUGP1-210ENST00000589144 PRR20BP86481 221 aa13.3□□□□□ -0.28
SUGP1-210ENST00000589144 PRR20AP86496 221 aa13.3□□□□□ -0.28
SUGP1-210ENST00000589144 RRN3P1Q2M238 152 aa13.3□□□□□ -0.28
SUGP1-210ENST00000589144 MKXQ8IYA7 352 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms