RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 TMEM50AO95807 157 aa6.89□□□□□ -1.31
SPG11-212ENST00000558790 CD74P04233 296 aa6.89□□□□□ -1.31
SPG11-212ENST00000558790 HLA-DMAP28067 261 aa6.89□□□□□ -1.31
SPG11-212ENST00000558790 HSPE1P61604 102 aaKnown RBP6.89□□□□□ -1.31
SPG11-212ENST00000558790 PSMG4Q5JS54 123 aa6.89□□□□□ -1.31
SPG11-212ENST00000558790 UBE2NLQ5JXB2 153 aa6.89□□□□□ -1.31
SPG11-212ENST00000558790 SLC35G3Q8N808 338 aa6.89□□□□□ -1.31
SPG11-212ENST00000558790 OR6F1Q8NGZ6 308 aa6.89□□□□□ -1.31
SPG11-212ENST00000558790 FNDC4Q9H6D8 234 aaPredicted RBP6.89□□□□□ -1.31
SPG11-212ENST00000558790 FAT1Q14517 4588 aa6.88□□□□□ -1.31
SPG11-212ENST00000558790 HELTA6NFD8 242 aa6.88□□□□□ -1.31
SPG11-212ENST00000558790 CLN5O75503 358 aa6.88□□□□□ -1.31
SPG11-212ENST00000558790 IGKV1-17P01599 117 aa6.88□□□□□ -1.31
SPG11-212ENST00000558790 IGKV1-5P01602 117 aa6.88□□□□□ -1.31
SPG11-212ENST00000558790 P0C879 139 aa6.88□□□□□ -1.31
SPG11-212ENST00000558790 RNASE2P10153 161 aaKnown RBP6.88□□□□□ -1.31
SPG11-212ENST00000558790 S100GP29377 79 aa6.88□□□□□ -1.31
SPG11-212ENST00000558790 TGFBR1P36897 503 aa6.88□□□□□ -1.31
SPG11-212ENST00000558790 SNCAP37840 140 aa6.88□□□□□ -1.31
SPG11-212ENST00000558790 OPRK1P41145 380 aa6.88□□□□□ -1.31
SPG11-212ENST00000558790 DHRS2Q13268 280 aa6.88□□□□□ -1.31
SPG11-212ENST00000558790 KCTD21Q4G0X4 260 aa6.88□□□□□ -1.31
SPG11-212ENST00000558790 Q6ZR54 194 aa6.88□□□□□ -1.31
SPG11-212ENST00000558790 UBE2DNLQ8IWF7 75 aa6.88□□□□□ -1.31
SPG11-212ENST00000558790 RAB40CQ96S21 281 aa6.88□□□□□ -1.31
SPG11-212ENST00000558790 TM2D2Q9BX73 214 aa6.88□□□□□ -1.31
SPG11-212ENST00000558790 XCL2Q9UBD3 114 aa6.88□□□□□ -1.31
SPG11-212ENST00000558790 RAB26Q9ULW5 256 aa6.88□□□□□ -1.31
SPG11-212ENST00000558790 INS-IGF2F8WCM5 200 aa6.87□□□□□ -1.31
SPG11-212ENST00000558790 CORTO00230 105 aa6.87□□□□□ -1.31
SPG11-212ENST00000558790 HOXA1P49639 335 aaPredicted RBP6.87□□□□□ -1.31
SPG11-212ENST00000558790 TIGITQ495A1 244 aa6.87□□□□□ -1.31
SPG11-212ENST00000558790 SAMD12Q8N8I0 201 aa6.87□□□□□ -1.31
SPG11-212ENST00000558790 OR4X1Q8NH49 305 aa6.87□□□□□ -1.31
SPG11-212ENST00000558790 TRIM63Q969Q1 353 aa6.87□□□□□ -1.31
SPG11-212ENST00000558790 S100A16Q96FQ6 103 aaKnown RBP6.87□□□□□ -1.31
SPG11-212ENST00000558790 NARS2Q96I59 477 aaKnown RBP6.87□□□□□ -1.31
SPG11-212ENST00000558790 A0A0B4J293 547 aa6.86□□□□□ -1.31
SPG11-212ENST00000558790 FAM90A26D6RGX4 464 aa6.86□□□□□ -1.31
SPG11-212ENST00000558790 IFNA10P01566 189 aa6.86□□□□□ -1.31
SPG11-212ENST00000558790 IFNA17P01571 189 aa6.86□□□□□ -1.31
SPG11-212ENST00000558790 PRSS3P35030 304 aa6.86□□□□□ -1.31
SPG11-212ENST00000558790 AKR1C2P52895 323 aa6.86□□□□□ -1.31
SPG11-212ENST00000558790 EMP1P54849 157 aa6.86□□□□□ -1.31
SPG11-212ENST00000558790 TSPAN5P62079 268 aa6.86□□□□□ -1.31
SPG11-212ENST00000558790 DGAT2L7PQ6IED9 249 aa6.86□□□□□ -1.31
SPG11-212ENST00000558790 LPCAT3Q6P1A2 487 aa6.86□□□□□ -1.31
SPG11-212ENST00000558790 ZNF705AQ6ZN79 300 aaPredicted RBP6.86□□□□□ -1.31
SPG11-212ENST00000558790 TMEM230Q96A57 120 aa6.86□□□□□ -1.31
SPG11-212ENST00000558790 TP53RKQ96S44 253 aa6.86□□□□□ -1.31
SPG11-212ENST00000558790 C1QTNF4Q9BXJ3 329 aa6.86□□□□□ -1.31
SPG11-212ENST00000558790 HMCN2Q8NDA2 5059 aa6.86□□□□□ -1.31
SPG11-212ENST00000558790 ZNF705FA8MVS1 300 aaPredicted RBP6.85□□□□□ -1.31
SPG11-212ENST00000558790 H3BMM0 161 aa6.85□□□□□ -1.31
SPG11-212ENST00000558790 SCGB2A1O75556 95 aa6.85□□□□□ -1.31
SPG11-212ENST00000558790 IFNA21P01568 189 aa6.85□□□□□ -1.31
SPG11-212ENST00000558790 IGLC1P0CG04 106 aa6.85□□□□□ -1.31
SPG11-212ENST00000558790 ZNF705DP0CH99 300 aaPredicted RBP6.85□□□□□ -1.31
SPG11-212ENST00000558790 ZNF705BP0CI00 300 aaPredicted RBP6.85□□□□□ -1.31
SPG11-212ENST00000558790 NPY1RP25929 384 aa6.85□□□□□ -1.31
SPG11-212ENST00000558790 ETV6P41212 452 aa6.85□□□□□ -1.31
SPG11-212ENST00000558790 EIF2B2P49770 351 aaKnown RBP6.85□□□□□ -1.31
SPG11-212ENST00000558790 SUB1P53999 127 aaKnown RBP eCLIP6.85□□□□□ -1.31
SPG11-212ENST00000558790 NUTF2P61970 127 aaKnown RBP6.85□□□□□ -1.31
SPG11-212ENST00000558790 SNRPD3P62318 126 aaKnown RBP6.85□□□□□ -1.31
SPG11-212ENST00000558790 NEDD8Q15843 81 aa6.85□□□□□ -1.31
SPG11-212ENST00000558790 USF2Q15853 346 aaPredicted RBP6.85□□□□□ -1.31
SPG11-212ENST00000558790 BSXQ3C1V8 233 aa6.85□□□□□ -1.31
SPG11-212ENST00000558790 C16orf54Q6UWD8 224 aa6.85□□□□□ -1.31
SPG11-212ENST00000558790 GPX8Q8TED1 209 aa6.85□□□□□ -1.31
SPG11-212ENST00000558790 PDCD10Q9BUL8 212 aa6.85□□□□□ -1.31
SPG11-212ENST00000558790 A0A0G2JRQ6 117 aa6.84□□□□□ -1.31
SPG11-212ENST00000558790 SPART-AS1P0CW21 52 aa6.84□□□□□ -1.31
SPG11-212ENST00000558790 HLA-DRB4P13762 266 aa6.84□□□□□ -1.31
SPG11-212ENST00000558790 RPL5P46777 297 aaKnown RBP6.84□□□□□ -1.31
SPG11-212ENST00000558790 RND2P52198 227 aa6.84□□□□□ -1.31
SPG11-212ENST00000558790 PIGPP57054 158 aa6.84□□□□□ -1.31
SPG11-212ENST00000558790 DEFB1P60022 68 aa6.84□□□□□ -1.31
SPG11-212ENST00000558790 RND3P61587 244 aa6.84□□□□□ -1.31
SPG11-212ENST00000558790 SOHLH1Q5JUK2 328 aa6.84□□□□□ -1.31
SPG11-212ENST00000558790 GDF5OSQ5U4N7 250 aa6.84□□□□□ -1.31
SPG11-212ENST00000558790 CROCCP3Q8IVE0 287 aa6.84□□□□□ -1.31
SPG11-212ENST00000558790 ENY2Q9NPA8 101 aa6.84□□□□□ -1.31
SPG11-212ENST00000558790 NRN1Q9NPD7 142 aa6.84□□□□□ -1.31
SPG11-212ENST00000558790 HLA-DRB4X5D2U9 266 aa6.84□□□□□ -1.31
SPG11-212ENST00000558790 FLG2Q5D862 2391 aaPredicted RBP6.83□□□□□ -1.32
SPG11-212ENST00000558790 IGHV3OR16-12A0A075B7B8 117 aa6.83□□□□□ -1.32
SPG11-212ENST00000558790 TRAV30A0A087WSZ9 112 aa6.83□□□□□ -1.32
SPG11-212ENST00000558790 TMEM189A5PLL7 270 aa6.83□□□□□ -1.32
SPG11-212ENST00000558790 IGKV3-20P01619 116 aa6.83□□□□□ -1.32
SPG11-212ENST00000558790 IL4P05112 153 aa6.83□□□□□ -1.32
SPG11-212ENST00000558790 PGAM2P15259 253 aa6.83□□□□□ -1.32
SPG11-212ENST00000558790 HTN3P15516 51 aa6.83□□□□□ -1.32
SPG11-212ENST00000558790 OR10J1P30954 320 aa6.83□□□□□ -1.32
SPG11-212ENST00000558790 RCVRNP35243 200 aa6.83□□□□□ -1.32
SPG11-212ENST00000558790 FXYD7P58549 80 aa6.83□□□□□ -1.32
SPG11-212ENST00000558790 DHODHQ02127 395 aa6.83□□□□□ -1.32
SPG11-212ENST00000558790 ANXA2RQ3ZCQ2 193 aa6.83□□□□□ -1.32
SPG11-212ENST00000558790 C1orf134Q5TEV5 83 aa6.83□□□□□ -1.32
SPG11-212ENST00000558790 FAM222AQ5U5X8 452 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms