RNA–Protein interactions for RNA: ENST00000556360.1

PCNX4-212, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-212ENST00000556360 IP6K3Q96PC2 410 aa2.35□□□□□ -2.03
PCNX4-212ENST00000556360 DDA1Q9BW61 102 aa2.35□□□□□ -2.03
PCNX4-212ENST00000556360 MRPL37Q9BZE1 423 aaKnown RBP2.35□□□□□ -2.03
PCNX4-212ENST00000556360 SMIM3Q9BZL3 60 aa2.35□□□□□ -2.03
PCNX4-212ENST00000556360 EIF5A2Q9GZV4 153 aaKnown RBP2.35□□□□□ -2.03
PCNX4-212ENST00000556360 IFI27L2Q9H2X8 130 aa2.35□□□□□ -2.03
PCNX4-212ENST00000556360 OR51I2Q9H344 312 aa2.35□□□□□ -2.03
PCNX4-212ENST00000556360 ZNF442Q9H7R0 627 aa2.35□□□□□ -2.03
PCNX4-212ENST00000556360 MTCH1Q9NZJ7 389 aa2.35□□□□□ -2.03
PCNX4-212ENST00000556360 SPEGQ15772 3267 aa2.35□□□□□ -2.03
PCNX4-212ENST00000556360 DSCAML1Q8TD84 2053 aa2.35□□□□□ -2.03
PCNX4-212ENST00000556360 ZDBF2Q9HCK1 2354 aa2.35□□□□□ -2.03
PCNX4-212ENST00000556360 PRRC2CQ9Y520 2896 aaKnown RBP2.35□□□□□ -2.03
PCNX4-212ENST00000556360 TRAV26-1A0A087WT03 109 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 A0A1W2PPE3 182 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 PLAC8L1A1L4L8 177 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 FAM24AA6NFZ4 105 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 ZNF729A6NN14 1252 aaPredicted RBP2.34□□□□□ -2.03
PCNX4-212ENST00000556360 CD300LBA8K4G0 201 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 LINC00587B1AMM8 73 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 SEC14L6B5MCN3 397 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 C21orf140B9A014 251 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 TRAPPC2LH3BP13 241 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 M0R036 132 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 WRBO00258 174 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 SYNGR2O43760 224 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 MRPL33O75394 65 aaKnown RBP2.34□□□□□ -2.03
PCNX4-212ENST00000556360 CYB5R3P00387 301 aaPredicted RBP2.34□□□□□ -2.03
PCNX4-212ENST00000556360 IFNA1P01562 189 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 IGKV1-39P01597 117 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 IGKV1D-39P04432 117 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 SERPINE2P07093 398 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 FABP1P07148 127 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 PGA5P0DJD9 388 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 CCL4P13236 92 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 CD99P14209 185 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 ZNF14P17017 642 aaPredicted RBP2.34□□□□□ -2.03
PCNX4-212ENST00000556360 TUBG1P23258 451 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 OMGP23515 440 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 HAAOP46952 286 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 RAB2AP61019 212 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 POLR2GP62487 172 aaKnown RBP eCLIP2.34□□□□□ -2.03
PCNX4-212ENST00000556360 RPL23AP62750 156 aaKnown RBP2.34□□□□□ -2.03
PCNX4-212ENST00000556360 GNG3P63215 75 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 HBG1P69891 147 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 HBG2P69892 147 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 CCL20P78556 96 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 FABP9Q0Z7S8 132 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 ELOBQ15370 118 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 GUSBP1Q15486 140 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 SSX2Q16385 188 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 GABRA6Q16445 453 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 LRRC75BQ2VPJ9 315 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 AKR1C8PQ5T2L2 129 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 LCN12Q6JVE5 192 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 TMEM14EPQ6UXP3 125 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 CYP2G1PQ6ZSU1 146 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 MRPL21Q7Z2W9 205 aaKnown RBP2.34□□□□□ -2.03
PCNX4-212ENST00000556360 FAM58AQ8N1B3 248 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 ZADH2Q8N4Q0 377 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 FAM24BQ8N5W8 94 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 ZNF565Q8N9K5 539 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 WDR31Q8NA23 367 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 ZFP62Q8NB50 900 aaPredicted RBP2.34□□□□□ -2.03
PCNX4-212ENST00000556360 OR2M7Q8NG81 312 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 RNASEH2CQ8TDP1 164 aaKnown RBP2.34□□□□□ -2.03
PCNX4-212ENST00000556360 Q8WTZ3 238 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 CA5BP1Q8WTZ4 195 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 ABHD3Q8WU67 409 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 CT55Q8WUE5 264 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 ISOC2Q96AB3 205 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 APH1AQ96BI3 265 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 TVP23CQ96ET8 276 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 HES4Q9HCC6 221 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 TMEM9BQ9NQ34 198 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 TUBG2Q9NRH3 451 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 ZMAT5Q9UDW3 170 aaKnown RBP2.34□□□□□ -2.03
PCNX4-212ENST00000556360 NOSIPQ9Y314 301 aaKnown RBP2.34□□□□□ -2.03
PCNX4-212ENST00000556360 NCOR1O75376 2440 aa2.34□□□□□ -2.03
PCNX4-212ENST00000556360 TECTAO75443 2155 aa2.34□□□□□ -2.04
PCNX4-212ENST00000556360 TET2Q6N021 2002 aaPredicted RBP2.34□□□□□ -2.04
PCNX4-212ENST00000556360 MED13Q9UHV7 2174 aa2.33□□□□□ -2.04
PCNX4-212ENST00000556360 USP34Q70CQ2 3546 aa2.33□□□□□ -2.04
PCNX4-212ENST00000556360 CUL9Q8IWT3 2517 aa2.33□□□□□ -2.04
PCNX4-212ENST00000556360 FRYQ5TBA9 3013 aa2.33□□□□□ -2.04
PCNX4-212ENST00000556360 TANC2Q9HCD6 1990 aa2.33□□□□□ -2.04
PCNX4-212ENST00000556360 SMCO3A2RU48 225 aa2.33□□□□□ -2.04
PCNX4-212ENST00000556360 C5orf49A4QMS7 147 aa2.33□□□□□ -2.04
PCNX4-212ENST00000556360 TMEM210A6NLX4 147 aa2.33□□□□□ -2.04
PCNX4-212ENST00000556360 IQCF6A8MYZ5 107 aa2.33□□□□□ -2.04
PCNX4-212ENST00000556360 CLDN34H7C241 214 aa2.33□□□□□ -2.04
PCNX4-212ENST00000556360 RBFOX2O43251 390 aaKnown RBP eCLIP2.33□□□□□ -2.04
PCNX4-212ENST00000556360 SYNGR1O43759 233 aa2.33□□□□□ -2.04
PCNX4-212ENST00000556360 CHST1O43916 411 aa2.33□□□□□ -2.04
PCNX4-212ENST00000556360 HIST1H2BKO60814 126 aa2.33□□□□□ -2.04
PCNX4-212ENST00000556360 CST7O76096 145 aa2.33□□□□□ -2.04
PCNX4-212ENST00000556360 IFNA10P01566 189 aa2.33□□□□□ -2.04
PCNX4-212ENST00000556360 IFNA5P01569 189 aa2.33□□□□□ -2.04
PCNX4-212ENST00000556360 IGKV1-5P01602 117 aa2.33□□□□□ -2.04
PCNX4-212ENST00000556360 HLA-HP01893 362 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms