RNA–Protein interactions for RNA: ENST00000555266.1

ATL1-206, Transcript of atlastin GTPase 1, humanhuman

TSL 3

Gene ATL1, Length 383 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-206ENST00000555266 LRRK2Q5S007 2527 aa0.42□□□□□ -2.34
ATL1-206ENST00000555266 CCDC168Q8NDH2 2452 aa0.42□□□□□ -2.34
ATL1-206ENST00000555266 TTC28Q96AY4 2481 aa0.42□□□□□ -2.34
ATL1-206ENST00000555266 MED12Q93074 2177 aa0.42□□□□□ -2.34
ATL1-206ENST00000555266 hCG_1818297A0A087WSY0 165 aa0.42□□□□□ -2.34
ATL1-206ENST00000555266 A0A087X0T9 212 aa0.42□□□□□ -2.34
ATL1-206ENST00000555266 SMIM9A6NGZ8 99 aa0.42□□□□□ -2.34
ATL1-206ENST00000555266 A8MT66 165 aa0.42□□□□□ -2.34
ATL1-206ENST00000555266 CCL25O15444 150 aa0.42□□□□□ -2.34
ATL1-206ENST00000555266 TCRBP04435 133 aa0.42□□□□□ -2.34
ATL1-206ENST00000555266 SRIP30626 198 aa0.42□□□□□ -2.34
ATL1-206ENST00000555266 OMPP47874 163 aa0.42□□□□□ -2.34
ATL1-206ENST00000555266 YPEL3P61236 119 aaPredicted RBP0.42□□□□□ -2.34
ATL1-206ENST00000555266 AESQ08117 197 aa0.42□□□□□ -2.34
ATL1-206ENST00000555266 ITGB3BPQ13352 177 aaPredicted RBP0.42□□□□□ -2.34
ATL1-206ENST00000555266 TSNQ15631 228 aaKnown RBP0.42□□□□□ -2.34
ATL1-206ENST00000555266 LCA10Q71F78 164 aa0.42□□□□□ -2.34
ATL1-206ENST00000555266 GDPD1Q8N9F7 314 aa0.42□□□□□ -2.34
ATL1-206ENST00000555266 SLC25A40Q8TBP6 338 aa0.42□□□□□ -2.34
ATL1-206ENST00000555266 UCK1Q9HA47 277 aa0.42□□□□□ -2.34
ATL1-206ENST00000555266 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.42□□□□□ -2.34
ATL1-206ENST00000555266 NHP2Q9NX24 153 aaKnown RBP0.42□□□□□ -2.34
ATL1-206ENST00000555266 UBR4Q5T4S7 5183 aa0.42□□□□□ -2.34
ATL1-206ENST00000555266 COL1A1P02452 1464 aaPredicted RBP0.41□□□□□ -2.34
ATL1-206ENST00000555266 PEAK1Q9H792 1746 aa0.41□□□□□ -2.34
ATL1-206ENST00000555266 KIAA1549Q9HCM3 1950 aa0.41□□□□□ -2.34
ATL1-206ENST00000555266 ZNF292O60281 2723 aa0.41□□□□□ -2.34
ATL1-206ENST00000555266 ASH1LQ9NR48 2969 aaKnown RBP0.41□□□□□ -2.34
ATL1-206ENST00000555266 MYH7BA7E2Y1 1941 aa0.41□□□□□ -2.34
ATL1-206ENST00000555266 Q8IYB0 196 aa0.41□□□□□ -2.34
ATL1-206ENST00000555266 OTUD6BQ8N6M0 293 aa0.41□□□□□ -2.34
ATL1-206ENST00000555266 LINC00301Q8NCQ3 95 aa0.41□□□□□ -2.34
ATL1-206ENST00000555266 BORCS5Q969J3 196 aa0.41□□□□□ -2.34
ATL1-206ENST00000555266 BORCS7Q96B45 105 aa0.41□□□□□ -2.34
ATL1-206ENST00000555266 HIST1H2BLQ99880 126 aa0.41□□□□□ -2.34
ATL1-206ENST00000555266 CMSS1Q9BQ75 279 aaKnown RBP0.41□□□□□ -2.34
ATL1-206ENST00000555266 BCL2L10Q9HD36 194 aa0.41□□□□□ -2.34
ATL1-206ENST00000555266 HEATR1Q9H583 2144 aaKnown RBP0.41□□□□□ -2.34
ATL1-206ENST00000555266 SCN8AQ9UQD0 1980 aa0.41□□□□□ -2.34
ATL1-206ENST00000555266 ARHGEF28Q8N1W1 1705 aaKnown RBP0.41□□□□□ -2.34
ATL1-206ENST00000555266 DSTQ03001 7570 aaKnown RBP0.41□□□□□ -2.34
ATL1-206ENST00000555266 FLNAP21333 2647 aaKnown RBP0.4□□□□□ -2.34
ATL1-206ENST00000555266 SPTBN4Q9H254 2564 aa0.4□□□□□ -2.35
ATL1-206ENST00000555266 MYH10P35580 1976 aa0.4□□□□□ -2.35
ATL1-206ENST00000555266 C7orf71A4D174 169 aa0.4□□□□□ -2.35
ATL1-206ENST00000555266 CLDN25C9JDP6 229 aa0.4□□□□□ -2.35
ATL1-206ENST00000555266 GADD45GO95257 159 aa0.4□□□□□ -2.35
ATL1-206ENST00000555266 DNAL4O96015 105 aa0.4□□□□□ -2.35
ATL1-206ENST00000555266 RNASE4P34096 147 aaKnown RBP0.4□□□□□ -2.35
ATL1-206ENST00000555266 PATE1Q8WXA2 126 aa0.4□□□□□ -2.35
ATL1-206ENST00000555266 SLAMF6Q96DU3 332 aa0.4□□□□□ -2.35
ATL1-206ENST00000555266 C2orf50Q96LR7 162 aa0.4□□□□□ -2.35
ATL1-206ENST00000555266 TMEM133Q9H2Q1 129 aa0.4□□□□□ -2.35
ATL1-206ENST00000555266 IDI2-AS1Q9NZ38 188 aa0.4□□□□□ -2.35
ATL1-206ENST00000555266 CHCHD2Q9Y6H1 151 aaPredicted RBP0.4□□□□□ -2.35
ATL1-206ENST00000555266 PIK3C2GO75747 1445 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 RIMBP3CA6NJZ7 1639 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 RIMBP3BA6NNM3 1639 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 RIMBP3Q9UFD9 1639 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 NSD1Q96L73 2696 aaPredicted RBP0.39□□□□□ -2.35
ATL1-206ENST00000555266 NBEAL2Q6ZNJ1 2754 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 SMIM23A6NLE4 172 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 NCR3O14931 201 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 CCL16O15467 120 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 RPP14O95059 124 aaKnown RBP0.39□□□□□ -2.35
ATL1-206ENST00000555266 SERPINE1P05121 402 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 PPIBP23284 216 aaKnown RBP0.39□□□□□ -2.35
ATL1-206ENST00000555266 EFNA4P52798 201 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 DYNLT1P63172 113 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 KRTAP21-1Q3LI58 79 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 Q6Q795 121 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 OR6V1Q8N148 313 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 OR52L1Q8NGH7 329 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 STAG3L4Q8TBR4 150 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 TMEM70Q9BUB7 260 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 C6orf62Q9GZU0 229 aaPredicted RBP0.39□□□□□ -2.35
ATL1-206ENST00000555266 FBXO5Q9UKT4 447 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 FRAS1Q86XX4 4008 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 MYO9AB2RTY4 2548 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 FASNP49327 2511 aaKnown RBP0.39□□□□□ -2.35
ATL1-206ENST00000555266 BDP1A6H8Y1 2624 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 NAV3Q8IVL0 2385 aa0.39□□□□□ -2.35
ATL1-206ENST00000555266 MYO3BQ8WXR4 1341 aa0.38□□□□□ -2.35
ATL1-206ENST00000555266 CCDC144AA2RUR9 1427 aa0.38□□□□□ -2.35
ATL1-206ENST00000555266 HIVEP3Q5T1R4 2406 aa0.38□□□□□ -2.35
ATL1-206ENST00000555266 TENM4Q6N022 2769 aa0.38□□□□□ -2.35
ATL1-206ENST00000555266 GCN1Q92616 2671 aaKnown RBP0.38□□□□□ -2.35
ATL1-206ENST00000555266 OBSL1O75147 1896 aa0.38□□□□□ -2.35
ATL1-206ENST00000555266 PLXNA4Q9HCM2 1894 aa0.38□□□□□ -2.35
ATL1-206ENST00000555266 CYB5BO43169 146 aa0.38□□□□□ -2.35
ATL1-206ENST00000555266 PDE6DO43924 150 aa0.38□□□□□ -2.35
ATL1-206ENST00000555266 KLF7O75840 302 aaPredicted RBP0.38□□□□□ -2.35
ATL1-206ENST00000555266 C8GP07360 202 aa0.38□□□□□ -2.35
ATL1-206ENST00000555266 MYL6P60660 151 aa0.38□□□□□ -2.35
ATL1-206ENST00000555266 RHOBP62745 196 aa0.38□□□□□ -2.35
ATL1-206ENST00000555266 SRSF6Q13247 344 aaKnown RBP0.38□□□□□ -2.35
ATL1-206ENST00000555266 EDDM3AQ14507 147 aa0.38□□□□□ -2.35
ATL1-206ENST00000555266 OR51A2Q8NGJ7 313 aa0.38□□□□□ -2.35
ATL1-206ENST00000555266 OR2T10Q8NGZ9 312 aa0.38□□□□□ -2.35
ATL1-206ENST00000555266 PRADC1Q9BSG0 188 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms