RNA–Protein interactions for RNA: ENST00000555266.1

ATL1-206, Transcript of atlastin GTPase 1, humanhuman

TSL 3

Gene ATL1, Length 383 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-206ENST00000555266 AEBP2Q6ZN18 517 aaPredicted RBP26.38■■□□□ 1.81
ATL1-206ENST00000555266 CHIC1Q5VXU3 224 aa24.69■■□□□ 1.54
ATL1-206ENST00000555266 SENP3Q9H4L4 574 aaPredicted RBP22.46■■□□□ 1.19
ATL1-206ENST00000555266 PHF23Q9BUL5 403 aaPredicted RBP22.14■■□□□ 1.13
ATL1-206ENST00000555266 FOXD1Q16676 465 aa21.03■□□□□ 0.96
ATL1-206ENST00000555266 POTEDQ86YR6 584 aa19.88■□□□□ 0.77
ATL1-206ENST00000555266 MSH5O43196 834 aa19.74■□□□□ 0.75
ATL1-206ENST00000555266 PLPPR3Q6T4P5 718 aa19.52■□□□□ 0.72
ATL1-206ENST00000555266 PIAS4Q8N2W9 510 aaPredicted RBP19.49■□□□□ 0.71
ATL1-206ENST00000555266 PPP6R1Q9UPN7 881 aa19.43■□□□□ 0.7
ATL1-206ENST00000555266 ADRA2BP18089 450 aa19.29■□□□□ 0.68
ATL1-206ENST00000555266 MAPK8IP2Q13387 824 aaPredicted RBP17.84■□□□□ 0.45
ATL1-206ENST00000555266 DMRT2Q9Y5R5 561 aa17.8■□□□□ 0.44
ATL1-206ENST00000555266 SCAF1Q9H7N4 1312 aaKnown RBP17.57■□□□□ 0.4
ATL1-206ENST00000555266 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
ATL1-206ENST00000555266 PPP4R3CPQ6ZMV5 832 aa17.08■□□□□ 0.32
ATL1-206ENST00000555266 HOXD11P31277 338 aaPredicted RBP17.04■□□□□ 0.32
ATL1-206ENST00000555266 DCAF8L1A6NGE4 600 aa16.93■□□□□ 0.3
ATL1-206ENST00000555266 RNF39Q9H2S5 420 aa16.87■□□□□ 0.29
ATL1-206ENST00000555266 CNKSR2Q8WXI2 1034 aa16.83■□□□□ 0.28
ATL1-206ENST00000555266 RNF216Q9NWF9 866 aaPredicted RBP16.78■□□□□ 0.28
ATL1-206ENST00000555266 C1QBPQ07021 282 aaKnown RBP16.57■□□□□ 0.24
ATL1-206ENST00000555266 DNAJC5BQ9UF47 199 aa16.54■□□□□ 0.24
ATL1-206ENST00000555266 NCBP3Q53F19 620 aaKnown RBP16.26■□□□□ 0.19
ATL1-206ENST00000555266 NPM3O75607 178 aaKnown RBP16.12■□□□□ 0.17
ATL1-206ENST00000555266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.1■□□□□ 0.17
ATL1-206ENST00000555266 U3KPZ7 1027 aaPredicted RBP15.84■□□□□ 0.13
ATL1-206ENST00000555266 SPINK5Q9NQ38 1064 aaPredicted RBP15.69■□□□□ 0.1
ATL1-206ENST00000555266 DSG3P32926 999 aa15.68■□□□□ 0.1
ATL1-206ENST00000555266 CAPN15O75808 1086 aa15.59■□□□□ 0.09
ATL1-206ENST00000555266 SLC4A2P04920 1241 aa15.52■□□□□ 0.08
ATL1-206ENST00000555266 KCNA4P22459 653 aa15.51■□□□□ 0.07
ATL1-206ENST00000555266 POTEHQ6S545 545 aa15.48■□□□□ 0.07
ATL1-206ENST00000555266 TRHP20396 242 aaPredicted RBP15.26■□□□□ 0.03
ATL1-206ENST00000555266 ZNF219Q9P2Y4 722 aaPredicted RBP15.25■□□□□ 0.03
ATL1-206ENST00000555266 ABCB7O75027 752 aa15.23■□□□□ 0.03
ATL1-206ENST00000555266 APLP2Q06481 763 aa15.23■□□□□ 0.03
ATL1-206ENST00000555266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.17■□□□□ 0.02
ATL1-206ENST00000555266 HNRNPUL2Q1KMD3 747 aaKnown RBP15.17■□□□□ 0.02
ATL1-206ENST00000555266 SAMD1Q6SPF0 538 aaPredicted RBP15.09■□□□□ 0.01
ATL1-206ENST00000555266 RBM42Q9BTD8 480 aaKnown RBP14.89□□□□□ -0.03
ATL1-206ENST00000555266 MYCNP04198 464 aaPredicted RBP14.87□□□□□ -0.03
ATL1-206ENST00000555266 POLA2Q14181 598 aa14.82□□□□□ -0.04
ATL1-206ENST00000555266 CHRDL2Q6WN34 429 aa14.73□□□□□ -0.05
ATL1-206ENST00000555266 ATF5Q9Y2D1 282 aaPredicted RBP14.62□□□□□ -0.07
ATL1-206ENST00000555266 FOXD4L1Q9NU39 408 aa14.55□□□□□ -0.08
ATL1-206ENST00000555266 AKT1S1Q96B36 256 aa14.52□□□□□ -0.09
ATL1-206ENST00000555266 SLC4A1APQ9BWU0 796 aaKnown RBP14.51□□□□□ -0.09
ATL1-206ENST00000555266 ZBTB12Q9Y330 459 aaPredicted RBP14.46□□□□□ -0.09
ATL1-206ENST00000555266 REM2Q8IYK8 340 aaPredicted RBP14.39□□□□□ -0.11
ATL1-206ENST00000555266 OSCARQ8IYS5 282 aa14.37□□□□□ -0.11
ATL1-206ENST00000555266 SP7Q8TDD2 431 aaPredicted RBP14.36□□□□□ -0.11
ATL1-206ENST00000555266 PIP4P2Q8N4L2 257 aa14.34□□□□□ -0.11
ATL1-206ENST00000555266 ZBTB22O15209 634 aa14.31□□□□□ -0.12
ATL1-206ENST00000555266 PITPNM1O00562 1244 aa14.25□□□□□ -0.13
ATL1-206ENST00000555266 FXR2P51116 673 aaKnown RBP eCLIP14.22□□□□□ -0.13
ATL1-206ENST00000555266 ATXN8OSP0DMR3 200 aa14.15□□□□□ -0.14
ATL1-206ENST00000555266 HAX1O00165 279 aa14.07□□□□□ -0.16
ATL1-206ENST00000555266 SPDYE2BA6NHP3 402 aa14.03□□□□□ -0.16
ATL1-206ENST00000555266 SPDYE6P0CI01 402 aa14.03□□□□□ -0.16
ATL1-206ENST00000555266 SPDYE2Q495Y8 402 aa14.03□□□□□ -0.16
ATL1-206ENST00000555266 EVX2Q03828 476 aa14□□□□□ -0.17
ATL1-206ENST00000555266 MKRN4PQ13434 485 aaPredicted RBP13.95□□□□□ -0.18
ATL1-206ENST00000555266 FBLN2P98095 1184 aa13.94□□□□□ -0.18
ATL1-206ENST00000555266 SSUH2Q9Y2M2 353 aa13.87□□□□□ -0.19
ATL1-206ENST00000555266 PRKAR2AP13861 404 aaKnown RBP13.84□□□□□ -0.19
ATL1-206ENST00000555266 SPDYE1Q8NFV5 336 aaPredicted RBP13.83□□□□□ -0.2
ATL1-206ENST00000555266 C19orf67A6NJJ6 358 aa13.78□□□□□ -0.2
ATL1-206ENST00000555266 CLEC11AQ9Y240 323 aa13.78□□□□□ -0.2
ATL1-206ENST00000555266 ZNF692Q9BU19 519 aaPredicted RBP13.76□□□□□ -0.21
ATL1-206ENST00000555266 GABBR2O75899 941 aa13.63□□□□□ -0.23
ATL1-206ENST00000555266 CHADLQ6NUI6 762 aa13.63□□□□□ -0.23
ATL1-206ENST00000555266 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
ATL1-206ENST00000555266 PRR29P0C7W0 189 aa13.52□□□□□ -0.25
ATL1-206ENST00000555266 LHX8Q68G74 356 aa13.44□□□□□ -0.26
ATL1-206ENST00000555266 POTEIP0CG38 1075 aa13.4□□□□□ -0.26
ATL1-206ENST00000555266 FARP1Q9Y4F1 1045 aaPredicted RBP13.4□□□□□ -0.26
ATL1-206ENST00000555266 CD44P16070 742 aaKnown RBP13.37□□□□□ -0.27
ATL1-206ENST00000555266 CSRNP3Q8WYN3 585 aa13.32□□□□□ -0.28
ATL1-206ENST00000555266 CLCN6P51797 869 aa13.26□□□□□ -0.29
ATL1-206ENST00000555266 ZNF579Q8NAF0 562 aaKnown RBP13.21□□□□□ -0.29
ATL1-206ENST00000555266 CREBZFQ9NS37 354 aa13.21□□□□□ -0.29
ATL1-206ENST00000555266 ZRANB1Q9UGI0 708 aa13.12□□□□□ -0.31
ATL1-206ENST00000555266 STAG3Q9UJ98 1225 aa13.11□□□□□ -0.31
ATL1-206ENST00000555266 DCBLD2Q96PD2 775 aa13.1□□□□□ -0.31
ATL1-206ENST00000555266 GALR2O43603 387 aaPredicted RBP13.06□□□□□ -0.32
ATL1-206ENST00000555266 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.33
ATL1-206ENST00000555266 MNX1P50219 401 aaPredicted RBP13□□□□□ -0.33
ATL1-206ENST00000555266 POTEB2H3BUK9 544 aa12.95□□□□□ -0.34
ATL1-206ENST00000555266 PHF12Q96QT6 1004 aa12.94□□□□□ -0.34
ATL1-206ENST00000555266 OTUD5Q96G74 571 aa12.93□□□□□ -0.34
ATL1-206ENST00000555266 PAK3O75914 559 aaPredicted RBP12.88□□□□□ -0.35
ATL1-206ENST00000555266 PELP1Q8IZL8 1130 aaKnown RBP12.87□□□□□ -0.35
ATL1-206ENST00000555266 NPM1P06748 294 aaKnown RBP eCLIP12.85□□□□□ -0.35
ATL1-206ENST00000555266 EHMT2Q96KQ7 1210 aa12.85□□□□□ -0.35
ATL1-206ENST00000555266 PROM2Q8N271 834 aa12.8□□□□□ -0.36
ATL1-206ENST00000555266 ASTLQ6HA08 431 aaPredicted RBP12.79□□□□□ -0.36
ATL1-206ENST00000555266 MS4A3Q96HJ5 214 aa12.78□□□□□ -0.36
ATL1-206ENST00000555266 PLSCR2Q9NRY7 297 aa12.76□□□□□ -0.37
ATL1-206ENST00000555266 ATMINO43313 823 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms