RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 LPAL2Q16609 132 aa12.69□□□□□ -0.38
SYNE3-203ENST00000554873 TMEM116Q8NCL8 245 aa12.69□□□□□ -0.38
SYNE3-203ENST00000554873 AMMECR1Q9Y4X0 333 aaPredicted RBP12.69□□□□□ -0.38
SYNE3-203ENST00000554873 ZDBF2Q9HCK1 2354 aa12.68□□□□□ -0.38
SYNE3-203ENST00000554873 A0A1W2PNU3 283 aaPredicted RBP12.68□□□□□ -0.38
SYNE3-203ENST00000554873 DUTP33316 252 aaKnown RBP12.68□□□□□ -0.38
SYNE3-203ENST00000554873 ZADH2Q8N4Q0 377 aa12.68□□□□□ -0.38
SYNE3-203ENST00000554873 OR13A1Q8NGR1 328 aa12.68□□□□□ -0.38
SYNE3-203ENST00000554873 KLF14Q8TD94 323 aaPredicted RBP12.68□□□□□ -0.38
SYNE3-203ENST00000554873 C19orf24Q9BVV8 132 aa12.68□□□□□ -0.38
SYNE3-203ENST00000554873 MGST3O14880 152 aa12.68□□□□□ -0.38
SYNE3-203ENST00000554873 FOXF2Q12947 444 aa12.68□□□□□ -0.38
SYNE3-203ENST00000554873 DCTN5Q9BTE1 182 aa12.68□□□□□ -0.38
SYNE3-203ENST00000554873 C7orf69Q9H7B7 122 aa12.68□□□□□ -0.38
SYNE3-203ENST00000554873 SPRR3Q9UBC9 169 aa12.68□□□□□ -0.38
SYNE3-203ENST00000554873 PRRC2CQ9Y520 2896 aaKnown RBP12.68□□□□□ -0.38
SYNE3-203ENST00000554873 A0A1W2PRD5 423 aa12.67□□□□□ -0.38
SYNE3-203ENST00000554873 A0A1W2PRF3 423 aa12.67□□□□□ -0.38
SYNE3-203ENST00000554873 A0A1W2PRM7 423 aa12.67□□□□□ -0.38
SYNE3-203ENST00000554873 A8MWL6 223 aa12.67□□□□□ -0.38
SYNE3-203ENST00000554873 IGHV1-2P23083 117 aa12.67□□□□□ -0.38
SYNE3-203ENST00000554873 CSN1S1P47710 185 aa12.67□□□□□ -0.38
SYNE3-203ENST00000554873 GPR12P47775 334 aa12.67□□□□□ -0.38
SYNE3-203ENST00000554873 ATP5G2Q06055 141 aa12.67□□□□□ -0.38
SYNE3-203ENST00000554873 TMEM164Q5U3C3 297 aa12.67□□□□□ -0.38
SYNE3-203ENST00000554873 HCFC1P51610 2035 aa12.67□□□□□ -0.38
SYNE3-203ENST00000554873 PRR33A8MZF0 331 aa12.67□□□□□ -0.38
SYNE3-203ENST00000554873 LAMTOR5O43504 91 aa12.67□□□□□ -0.38
SYNE3-203ENST00000554873 PROP1O75360 226 aa12.67□□□□□ -0.38
SYNE3-203ENST00000554873 LYZL6O75951 148 aa12.67□□□□□ -0.38
SYNE3-203ENST00000554873 MDS2Q8NDY4 140 aa12.67□□□□□ -0.38
SYNE3-203ENST00000554873 AP5S1Q9NUS5 200 aa12.67□□□□□ -0.38
SYNE3-203ENST00000554873 KLF13Q9Y2Y9 288 aaPredicted RBP12.67□□□□□ -0.38
SYNE3-203ENST00000554873 NBEAQ8NFP9 2946 aa12.67□□□□□ -0.38
SYNE3-203ENST00000554873 C8orf88P0DMB2 117 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 ETDBQ3ZM63 59 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 SS18L2Q9UHA2 77 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 PSG8Q9UQ74 426 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 MUC3AQ02505 3323 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 PTPRBP23467 1997 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 TRGV8A0A0C4DH27 118 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 FNDC10F2Z333 226 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 CHEK1O14757 476 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 CT45A6P0DMU7 189 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 CT45A5P0DMU8 189 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 CT45A7P0DMV0 189 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 CT45A1Q5HYN5 189 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 SH2D6Q7Z4S9 175 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 TTC9CQ8N5M4 171 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 CT45A3Q8NHU0 189 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 PEX7O00628 323 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 ZNF137PP52743 207 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 TMEM177Q53S58 311 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 SHISA2Q6UWI4 295 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 C8orf86Q6ZUL3 223 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 PRR7Q8TB68 274 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 RPP21Q9H633 154 aaKnown RBP12.66□□□□□ -0.38
SYNE3-203ENST00000554873 TCF19Q9Y242 345 aa12.66□□□□□ -0.38
SYNE3-203ENST00000554873 KIR2DL2P43627 348 aaPredicted RBP12.65□□□□□ -0.38
SYNE3-203ENST00000554873 LGALS9BQ3B8N2 356 aa12.65□□□□□ -0.38
SYNE3-203ENST00000554873 LGALS9CQ6DKI2 356 aa12.65□□□□□ -0.38
SYNE3-203ENST00000554873 C18orf15Q96N68 181 aa12.65□□□□□ -0.38
SYNE3-203ENST00000554873 GPR82Q96P67 336 aa12.65□□□□□ -0.38
SYNE3-203ENST00000554873 TRGV5A0A0B4J1U4 118 aa12.65□□□□□ -0.38
SYNE3-203ENST00000554873 FCGR3BO75015 233 aa12.65□□□□□ -0.38
SYNE3-203ENST00000554873 CSN3P07498 182 aa12.65□□□□□ -0.38
SYNE3-203ENST00000554873 ARPC1AQ92747 370 aa12.65□□□□□ -0.38
SYNE3-203ENST00000554873 PGLYRP4Q96LB8 373 aa12.65□□□□□ -0.38
SYNE3-203ENST00000554873 ERG28Q9UKR5 140 aa12.65□□□□□ -0.38
SYNE3-203ENST00000554873 CYSLTR1Q9Y271 337 aa12.65□□□□□ -0.38
SYNE3-203ENST00000554873 C15orf65H3BRN8 121 aa12.64□□□□□ -0.39
SYNE3-203ENST00000554873 UBE2L3P68036 154 aaKnown RBP12.64□□□□□ -0.39
SYNE3-203ENST00000554873 CR1LQ2VPA4 569 aa12.64□□□□□ -0.39
SYNE3-203ENST00000554873 CT83Q5H943 113 aa12.64□□□□□ -0.39
SYNE3-203ENST00000554873 PIP4P2Q8N4L2 257 aa12.64□□□□□ -0.39
SYNE3-203ENST00000554873 SLC25A33Q9BSK2 321 aa12.64□□□□□ -0.39
SYNE3-203ENST00000554873 CXXC4Q9H2H0 198 aa12.64□□□□□ -0.39
SYNE3-203ENST00000554873 KLK10O43240 276 aa12.64□□□□□ -0.39
SYNE3-203ENST00000554873 APOHP02749 345 aaPredicted RBP12.64□□□□□ -0.39
SYNE3-203ENST00000554873 GCSHP23434 173 aa12.64□□□□□ -0.39
SYNE3-203ENST00000554873 GATA3P23771 443 aa12.64□□□□□ -0.39
SYNE3-203ENST00000554873 ERVK-16P61578 105 aa12.64□□□□□ -0.39
SYNE3-203ENST00000554873 TM4SF20Q53R12 229 aa12.64□□□□□ -0.39
SYNE3-203ENST00000554873 VKORC1L1Q8N0U8 176 aa12.64□□□□□ -0.39
SYNE3-203ENST00000554873 Q8TCH9 128 aa12.64□□□□□ -0.39
SYNE3-203ENST00000554873 FZR1Q9UM11 496 aa12.64□□□□□ -0.39
SYNE3-203ENST00000554873 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.63□□□□□ -0.39
SYNE3-203ENST00000554873 CRYGCP07315 174 aa12.63□□□□□ -0.39
SYNE3-203ENST00000554873 INO80CQ6PI98 192 aaPredicted RBP12.63□□□□□ -0.39
SYNE3-203ENST00000554873 PHLDA1Q8WV24 401 aaPredicted RBP12.63□□□□□ -0.39
SYNE3-203ENST00000554873 TET2Q6N021 2002 aaPredicted RBP12.63□□□□□ -0.39
SYNE3-203ENST00000554873 SPINK8P0C7L1 97 aa12.63□□□□□ -0.39
SYNE3-203ENST00000554873 FXYD2P54710 66 aa12.63□□□□□ -0.39
SYNE3-203ENST00000554873 RBPMS2Q6ZRY4 209 aaKnown RBP12.63□□□□□ -0.39
SYNE3-203ENST00000554873 ZNF329Q86UD4 541 aa12.63□□□□□ -0.39
SYNE3-203ENST00000554873 BCL6BQ8N143 479 aaPredicted RBP12.63□□□□□ -0.39
SYNE3-203ENST00000554873 ZNF502Q8TBZ5 544 aa12.63□□□□□ -0.39
SYNE3-203ENST00000554873 RNF183Q96D59 192 aa12.63□□□□□ -0.39
SYNE3-203ENST00000554873 E9PLD3 99 aa12.62□□□□□ -0.39
SYNE3-203ENST00000554873 NKX2-8O15522 239 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms