RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 GPR146Q96CH1 333 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 MUCL1Q96DR8 90 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 ZNF414Q96IQ9 312 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 MS4A6AQ9H2W1 248 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 IFI27L2Q9H2X8 130 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 SMDT1Q9H4I9 107 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 PARP11Q9NR21 331 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 RBM12B-AS1Q9P1G2 102 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 CHD5Q8TDI0 1954 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 ASXL3Q9C0F0 2248 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 NF1P21359 2839 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 MTORP42345 2549 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 CACNA1EQ15878 2313 aa2.65□□□□□ -1.98
SFSWAP-211ENST00000542813 RELNP78509 3460 aa2.65□□□□□ -1.98
SFSWAP-211ENST00000542813 TLN1Q9Y490 2541 aaKnown RBP2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 TRAV8-3A0A0A6YYJ7 113 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 IGHV3-72A0A0B4J1Y9 119 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 SPAARA0A1B0GVQ0 90 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 MYBPHLA2RUH7 354 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 C5orf63A6NC05 138 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 H0YJW9 148 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 BPY2O14599 106 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 RBFOX2O43251 390 aaKnown RBP eCLIP2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 ANGPTL7O43827 346 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 OR7C2O60412 319 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 EPPINO95925 133 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 CA2P00918 260 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 APCSP02743 223 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 OR4A8P0C604 315 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 OR5G3P0C626 314 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNF688P0C7X2 276 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 TRGC1P0CF51 173 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 TPT1P13693 172 aaKnown RBP2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 PYCR1P32322 319 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 POLR2HP52434 150 aaKnown RBP2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 CKS1BP61024 79 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 TBPL1P62380 186 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 BTG2P78543 158 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 H3F3AP84243 136 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 MEF2CQ06413 473 aaPredicted RBP2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 AESQ08117 197 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 SMAGPQ0VAQ4 97 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 ACSM3Q53FZ2 586 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 SPIN3Q5JUX0 258 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 UBE2NLQ5JXB2 153 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 LDLRAD2Q5SZI1 272 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 PRSS54Q6PEW0 395 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 TMPPEQ6ZT21 453 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 OLIG3Q7RTU3 272 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 UMODL1-AS1Q8N2C9 162 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 MUC15Q8N387 334 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 MORN4Q8NDC4 146 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 OR52L1Q8NGH7 329 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 OR5D16Q8NGK9 328 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 ACY3Q96HD9 319 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 LINC01587Q99440 93 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 SCRT1Q9BWW7 348 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 CHST6Q9GZX3 395 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 MAP1LC3AQ9H492 121 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 PDFQ9HBH1 243 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 C8orf17Q9NRJ1 99 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 CYTL1Q9NRR1 136 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 TMEM38BQ9NVV0 291 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 NAT8Q9UHE5 227 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 TNFSF18Q9UNG2 199 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 ABCA2Q9BZC7 2435 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 PLXNB3Q9ULL4 1909 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 DOCK4Q8N1I0 1966 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 SCN8AQ9UQD0 1980 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 COL12A1Q99715 3063 aa2.65□□□□□ -1.99
SFSWAP-211ENST00000542813 CCDC88CQ9P219 2028 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 POLQO75417 2590 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 ANAPC1Q9H1A4 1944 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 LOC102724200A0A096LPH7 203 aaPredicted RBP2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 IGHV7-4-1A0A0J9YVY3 117 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 A0A1B0GW64 132 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 IRGMA1A4Y4 181 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 CD300LBA8K4G0 201 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 C8orf87E5RJ46 101 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 GABARAPH6UMI1 98 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 PIN1P1O15428 100 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNF861PO60384 105 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 GPR75O95800 540 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 SMIM17P0DL12 118 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 PSG2P11465 335 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 PPIBP23284 216 aaKnown RBP2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 IMPA1P29218 277 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 CMPK1P30085 196 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 SNCAP37840 140 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 LPAR6P43657 344 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 LOXL1Q08397 574 aaPredicted RBP2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNF658BQ4V348 819 aaPredicted RBP2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 GLT8D1Q68CQ7 371 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 GLT6D1Q7Z4J2 308 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 NIT1Q86X76 327 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 TMEM256Q8N2U0 113 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 SLC25A29Q8N8R3 303 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 PLPP5Q8NEB5 264 aa2.64□□□□□ -1.99
SFSWAP-211ENST00000542813 OR2Z1Q8NG97 314 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms