RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 GNG2P59768 71 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 KRTAP12-1P59990 96 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 MAXP61244 160 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 RPL26P61254 145 aaKnown RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 HIST1H4AP62805 103 aaKnown RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 RPS25P62851 125 aaKnown RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 PPP3R1P63098 170 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 HBBP68871 147 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 TNFAIP6P98066 277 aaPredicted RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 RPL18Q07020 188 aaKnown RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 NAIPQ13075 1403 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 NPATQ14207 1427 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 ZNF846Q147U1 533 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 IAH1Q2TAA2 248 aaPredicted RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 CCSMST1Q4G0I0 132 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 RNASE10Q5GAN6 216 aaKnown RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 MEIG1Q5JSS6 88 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 C9orf153Q5TBE3 101 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 C1orf140Q5VVS0 124 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 SYPL2Q5VXT5 272 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 MRPL54Q6P161 138 aaKnown RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 SCIMPQ6UWF3 145 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 UNQ5815/PRO19632Q6UWF5 114 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 Q6ZRU5 148 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 C3orf62Q6ZUJ4 267 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 LCA10Q71F78 164 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 MIR17HGQ75NE6 70 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 CLECL1Q8IZS7 167 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 C8orf59Q8N0T1 100 aaPredicted RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 EXOC3-AS1Q8N2X6 119 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 C12orf45Q8N5I9 185 aaPredicted RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 ZIC4Q8N9L1 334 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 LINC00301Q8NCQ3 95 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 PLPP5Q8NEB5 264 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 OR2M3Q8NG83 312 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 OR5D14Q8NGL3 314 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 OR5AK2Q8NH90 309 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 CLDND2Q8NHS1 167 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 THEM6Q8WUY1 208 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 C1orf54Q8WWF1 131 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 MAL2Q969L2 176 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 UBE2WQ96B02 151 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 CHCHD1Q96BP2 118 aaKnown RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 PRELID3AQ96N28 172 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 OR4C12Q96R67 309 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 PRADC1Q9BSG0 188 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 DERL1Q9BUN8 251 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 C1QTNF6Q9BXI9 259 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 OR8D2Q9GZM6 311 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 YTHDC2Q9H6S0 1430 aaKnown RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 CBLN4Q9NTU7 201 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 FKBP11Q9NYL4 201 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 TAS2R8Q9NYW2 309 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 OR5AC2Q9NZP5 309 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 COMMD3Q9UBI1 195 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 RPL26L1Q9UNX3 145 aaKnown RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 ZFP30Q9Y2G7 519 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 MED31Q9Y3C7 131 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 U3KQK5 164 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 RTL9Q8NET4 1388 aa0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 HELZ2Q9BYK8 2649 aaKnown RBP0.68□□□□□ -2.3
ECHDC1-219ENST00000526299 ERCC6Q03468 1493 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 PTPRJQ12913 1337 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 OVOS2A0A0G2JMS6 1433 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 PIK3C2GO75747 1445 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 NUP160Q12769 1436 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 SPATA31E1Q6ZUB1 1445 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 TRAV27A0A087WT01 109 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 TRAV14DV4A0A0A6YYC5 116 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 TRAV1-1A0A0B4J248 108 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 TRAV4A0A0B4J268 109 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 LOC107984640A0A0U1RRK4 108 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 A0A1B0GW64 132 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 LOC107986453A0A1B0GWG9 222 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 TRDV1A0A1B0GX56 115 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 C7orf71A4D174 169 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 FAM24AA6NFZ4 105 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 C11orf86A6NJI1 115 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 A8MUN3 132 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 ZNF705FA8MVS1 300 aaPredicted RBP0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 E7EQL1 145 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 G3V3Q6 166 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 CDC42EP2O14613 210 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 OVOL1O14753 267 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 HIST1H2BKO60814 126 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 EDF1O60869 148 aaKnown RBP0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 PROSCO94903 275 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 ZNF682O95780 498 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 DNAL4O96015 105 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 LTAP01374 205 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 IGHV3-7P01780 117 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 TRACP01848 142 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 TFF1P04155 84 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 TCRAP04437 139 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 S100A8P05109 93 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 HIST1H2BJP06899 126 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 CTSDP07339 412 aaPredicted RBP0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 CTSGP08311 255 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 NBEAP1P0C6P0 100 aa0.67□□□□□ -2.3
ECHDC1-219ENST00000526299 METTL15P1P0C7V9 234 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms