RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 BANF1O75531 89 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 IGKV1D-33P01593 117 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 IGKV1-33P01594 117 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 TRGV3P03979 118 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 BPGMP07738 259 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 RAB13P51153 203 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 AKR1C2P52895 323 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 PIGPP57054 158 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 RPS11P62280 158 aaKnown RBP eCLIP3.96□□□□□ -1.78
BRCA1-224ENST00000497488 OR8G1Q15617 311 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 LGALS9BQ3B8N2 356 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 LGALS9CQ6DKI2 356 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 GTSCR1Q86UQ5 136 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 CLVS1Q8IUQ0 354 aaPredicted RBP3.96□□□□□ -1.78
BRCA1-224ENST00000497488 DEFB119Q8N690 84 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 CYB561D1Q8N8Q1 229 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 DAND5Q8N907 189 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 RBPMSQ93062 196 aaKnown RBP3.96□□□□□ -1.78
BRCA1-224ENST00000497488 L3HYPDHQ96EM0 354 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 C2orf50Q96LR7 162 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 DOHHQ9BU89 302 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 EFCAB1Q9HAE3 211 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 LINC00588Q9Y4M8 146 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 ATG2BQ96BY7 2078 aa3.95□□□□□ -1.78
BRCA1-224ENST00000497488 IGKV1D-43A0A0B4J1Z2 117 aa3.95□□□□□ -1.78
BRCA1-224ENST00000497488 A0A0D9SEW6 157 aa3.95□□□□□ -1.78
BRCA1-224ENST00000497488 RFPL4AA6NLU0 287 aa3.95□□□□□ -1.78
BRCA1-224ENST00000497488 RFPL4AL1F8VTS6 287 aa3.95□□□□□ -1.78
BRCA1-224ENST00000497488 I3L521 148 aa3.95□□□□□ -1.78
BRCA1-224ENST00000497488 LHBP01229 141 aa3.95□□□□□ -1.78
BRCA1-224ENST00000497488 RPL7P18124 248 aaKnown RBP3.95□□□□□ -1.78
BRCA1-224ENST00000497488 CRYBB3P26998 211 aa3.95□□□□□ -1.78
BRCA1-224ENST00000497488 WNT4P56705 351 aa3.95□□□□□ -1.78
BRCA1-224ENST00000497488 ZNF616Q08AN1 781 aa3.95□□□□□ -1.78
BRCA1-224ENST00000497488 MRPL51Q4U2R6 128 aaKnown RBP3.95□□□□□ -1.78
BRCA1-224ENST00000497488 AMTNQ6UX39 209 aa3.95□□□□□ -1.78
BRCA1-224ENST00000497488 ADAT3Q96EY9 351 aaPredicted RBP3.95□□□□□ -1.78
BRCA1-224ENST00000497488 MCEEQ96PE7 176 aa3.95□□□□□ -1.78
BRCA1-224ENST00000497488 RNF5Q99942 180 aa3.95□□□□□ -1.78
BRCA1-224ENST00000497488 IMUPQ9GZP8 106 aa3.95□□□□□ -1.78
BRCA1-224ENST00000497488 TPT1P8Q9HAU6 139 aa3.95□□□□□ -1.78
BRCA1-224ENST00000497488 TP73-AS1Q9UF72 201 aa3.95□□□□□ -1.78
BRCA1-224ENST00000497488 LAMA1P25391 3075 aa3.95□□□□□ -1.78
BRCA1-224ENST00000497488 DNAH14Q0VDD8 3507 aa3.94□□□□□ -1.78
BRCA1-224ENST00000497488 CACNA1HO95180 2353 aa3.94□□□□□ -1.78
BRCA1-224ENST00000497488 GPR179Q6PRD1 2367 aa3.94□□□□□ -1.78
BRCA1-224ENST00000497488 IGLV3-10A0A075B6K4 115 aa3.94□□□□□ -1.78
BRCA1-224ENST00000497488 A0A087X0T9 212 aa3.94□□□□□ -1.78
BRCA1-224ENST00000497488 A0A1B0GX51 115 aa3.94□□□□□ -1.78
BRCA1-224ENST00000497488 DUXBA0A1W2PPF3 345 aa3.94□□□□□ -1.78
BRCA1-224ENST00000497488 A6NED7 52 aa3.94□□□□□ -1.78
BRCA1-224ENST00000497488 J3KT08 172 aa3.94□□□□□ -1.78
BRCA1-224ENST00000497488 S100A1P23297 94 aa3.94□□□□□ -1.78
BRCA1-224ENST00000497488 RPS3P23396 243 aaKnown RBP eCLIP3.94□□□□□ -1.78
BRCA1-224ENST00000497488 SDC4P31431 198 aa3.94□□□□□ -1.78
BRCA1-224ENST00000497488 POLR2HP52434 150 aaKnown RBP3.94□□□□□ -1.78
BRCA1-224ENST00000497488 TSPEAR-AS2P59090 65 aa3.94□□□□□ -1.78
BRCA1-224ENST00000497488 CCL20P78556 96 aa3.94□□□□□ -1.78
BRCA1-224ENST00000497488 OR8B8Q15620 311 aa3.94□□□□□ -1.78
BRCA1-224ENST00000497488 AGTRAPQ6RW13 159 aa3.94□□□□□ -1.78
BRCA1-224ENST00000497488 SSX8Q7RTT4 187 aa3.94□□□□□ -1.78
BRCA1-224ENST00000497488 OR13C4Q8NGS5 318 aa3.94□□□□□ -1.78
BRCA1-224ENST00000497488 H1FXQ92522 213 aaKnown RBP3.94□□□□□ -1.78
BRCA1-224ENST00000497488 TM2D3Q9BRN9 247 aa3.94□□□□□ -1.78
BRCA1-224ENST00000497488 TMEM126AQ9H061 195 aa3.94□□□□□ -1.78
BRCA1-224ENST00000497488 TNRC6BQ9UPQ9 1833 aaKnown RBP3.93□□□□□ -1.78
BRCA1-224ENST00000497488 A0A087WUU8 490 aa3.93□□□□□ -1.78
BRCA1-224ENST00000497488 BORCS7-ASMTA0A0B4J1R7 106 aa3.93□□□□□ -1.78
BRCA1-224ENST00000497488 TRAV41A0A0B4J266 112 aa3.93□□□□□ -1.78
BRCA1-224ENST00000497488 FAM107AO95990 144 aa3.93□□□□□ -1.78
BRCA1-224ENST00000497488 IGKV1-5P01602 117 aa3.93□□□□□ -1.78
BRCA1-224ENST00000497488 IGLV3-19P01714 112 aa3.93□□□□□ -1.78
BRCA1-224ENST00000497488 LINC00869P0C866 280 aa3.93□□□□□ -1.78
BRCA1-224ENST00000497488 IGHV3-30-3P0DP02 117 aa3.93□□□□□ -1.78
BRCA1-224ENST00000497488 NPPCP23582 126 aa3.93□□□□□ -1.78
BRCA1-224ENST00000497488 RPL30P62888 115 aaKnown RBP3.93□□□□□ -1.78
BRCA1-224ENST00000497488 HNRNPA0Q13151 305 aaKnown RBP3.93□□□□□ -1.78
BRCA1-224ENST00000497488 C10orf91Q5T1B1 145 aa3.93□□□□□ -1.78
BRCA1-224ENST00000497488 Q6ZR54 194 aa3.93□□□□□ -1.78
BRCA1-224ENST00000497488 ANGPTL5Q86XS5 388 aa3.93□□□□□ -1.78
BRCA1-224ENST00000497488 IP6K3Q96PC2 410 aa3.93□□□□□ -1.78
BRCA1-224ENST00000497488 SNRNP25Q9BV90 132 aaKnown RBP3.93□□□□□ -1.78
BRCA1-224ENST00000497488 LAMTOR3Q9UHA4 124 aa3.93□□□□□ -1.78
BRCA1-224ENST00000497488 PAIP2BQ9ULR5 123 aaKnown RBP3.93□□□□□ -1.78
BRCA1-224ENST00000497488 NYNRINQ9P2P1 1898 aaKnown RBP3.92□□□□□ -1.78
BRCA1-224ENST00000497488 ZFHX2Q9C0A1 2572 aaPredicted RBP3.92□□□□□ -1.78
BRCA1-224ENST00000497488 PLXND1Q9Y4D7 1925 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 SPEGQ15772 3267 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 TRAV36DV7A0A075B6V5 113 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 C10orf142B7Z368 130 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 PANO1I0J062 215 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 LECT2O14960 151 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 SH2D1AO60880 128 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 IFNA10P01566 189 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 COX4I1P13073 169 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 HIST1H2BOP23527 126 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 SRIP30626 198 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 HIST1H2BBP33778 126 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 HIST1H2BDP58876 126 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 HIST1H2BCP62807 126 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms