RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 A0A1B0GW64 132 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 ZNF860A6NHJ4 632 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 IBA57-AS1B1ANH7 110 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 C19orf84I3L1E1 186 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 J3QRK9 145 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 HMGB3O15347 200 aaKnown RBP0.79□□□□□ -2.28
VPS26A-208ENST00000497022 ORC5O43913 435 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 TCL1BO95988 128 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 IFNA1P01562 189 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 IFNA21P01568 189 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 INSL3P51460 131 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 YPEL3P61236 119 aaPredicted RBP0.79□□□□□ -2.28
VPS26A-208ENST00000497022 GNG5P63218 68 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 TFAMQ00059 246 aaKnown RBP0.79□□□□□ -2.28
VPS26A-208ENST00000497022 POU6F1Q14863 301 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 NDUFA5Q16718 116 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 ARHGAP11BQ3KRB8 267 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 TMEM155Q4W5P6 130 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 LINC01554Q52M75 96 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 LCN15Q6UWW0 184 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 DPPA3Q6W0C5 159 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 LCA10Q71F78 164 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 TRAPPC6BQ86SZ2 158 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 DHFR2Q86XF0 187 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 HIST3H2BBQ8N257 126 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 C9orf163Q8N9P6 203 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 RNASE11Q8TAA1 199 aaKnown RBP0.79□□□□□ -2.28
VPS26A-208ENST00000497022 GRPEL2Q8TAA5 225 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 GPR146Q96CH1 333 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 GINS4Q9BRT9 223 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 CENPHQ9H3R5 247 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 TAF9BQ9HBM6 251 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 OSTCQ9NRP0 149 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 GSKIPQ9P0R6 139 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 CKLFQ9UBR5 152 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 PRNDQ9UKY0 176 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 PYCARDQ9ULZ3 195 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 AMMECR1Q9Y4X0 333 aaPredicted RBP0.79□□□□□ -2.28
VPS26A-208ENST00000497022 ASB4Q9Y574 426 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 BRWD1Q9NSI6 2320 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 KIF24Q5T7B8 1368 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 CUL9Q8IWT3 2517 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 ZCCHC11Q5TAX3 1644 aaKnown RBP0.78□□□□□ -2.28
VPS26A-208ENST00000497022 N4BP2Q86UW6 1770 aaPredicted RBP0.78□□□□□ -2.28
VPS26A-208ENST00000497022 MYO5AQ9Y4I1 1855 aaKnown RBP0.78□□□□□ -2.28
VPS26A-208ENST00000497022 ZFC3H1O60293 1989 aaKnown RBP0.78□□□□□ -2.28
VPS26A-208ENST00000497022 TNRC6AQ8NDV7 1962 aaKnown RBP0.78□□□□□ -2.28
VPS26A-208ENST00000497022 CHD3Q12873 2000 aaKnown RBP0.78□□□□□ -2.28
VPS26A-208ENST00000497022 TRBV19A0A075B6N1 114 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 A0A087X0T9 212 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 IGKV1-9A0A0C4DH69 117 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 PPP5D1E7EU14 171 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 SDCBPO00560 298 aaPredicted RBP0.78□□□□□ -2.28
VPS26A-208ENST00000497022 KPNA4O00629 521 aaPredicted RBP0.78□□□□□ -2.28
VPS26A-208ENST00000497022 ATG12O94817 140 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 PMP2P02689 132 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 CLPSP04118 112 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 GPX2P18283 190 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 PIGPP57054 158 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 NCALDP61601 193 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 ZNF345Q14585 488 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 CCSMST1Q4G0I0 132 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 AKR1C8PQ5T2L2 129 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 LYRM7Q5U5X0 104 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 Q6ZQT0 140 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 AAED1Q7RTV5 226 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 DEFB128Q7Z7B8 93 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 SIGLECL1Q8N7X8 197 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 WFDC11Q8NEX6 87 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 OR8D4Q8NGM9 314 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 ADAT3Q96EY9 351 aaPredicted RBP0.78□□□□□ -2.28
VPS26A-208ENST00000497022 CCDC115Q96NT0 180 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 AIF1LQ9BQI0 150 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 IMUPQ9GZP8 106 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 LHFPL6Q9Y693 200 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 V9GYQ6 96 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 ARFGEF3Q5TH69 2177 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 DISP1Q96F81 1524 aa0.78□□□□□ -2.28
VPS26A-208ENST00000497022 SMARCA4P51532 1647 aa0.78□□□□□ -2.29
VPS26A-208ENST00000497022 COL4A1P02462 1669 aa0.78□□□□□ -2.29
VPS26A-208ENST00000497022 DIDO1Q9BTC0 2240 aaKnown RBP0.77□□□□□ -2.29
VPS26A-208ENST00000497022 TENM3Q9P273 2699 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 MEIKINA0A087WXM9 373 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 LOC107984640A0A0U1RRK4 108 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 C1orf196B1AJZ1 125 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 AIPO00170 330 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 CYB5BO43169 146 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 NDUFC2O95298 119 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 IGF2P01344 180 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 IFNA7P01567 189 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 SHBGP04278 402 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 GPX1P07203 203 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 CTSDP07339 412 aaPredicted RBP0.77□□□□□ -2.29
VPS26A-208ENST00000497022 CRYGAP11844 174 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 COX6A1P12074 109 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 IDO1P14902 403 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 SPI1P17947 270 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 KDELR1P24390 212 aa0.77□□□□□ -2.29
VPS26A-208ENST00000497022 FKBP2P26885 142 aaKnown RBP0.77□□□□□ -2.29
VPS26A-208ENST00000497022 PHBP35232 272 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms