RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 IZUMO1RA6ND01 250 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 NDUFC2-KCTD14E9PQ53 114 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 K7N7A8 449 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 ZNF324O75467 553 aaPredicted RBP2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 C1QAP02745 245 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 PRH1P02810 166 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 PTGDSP41222 190 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 POU3F1Q03052 451 aaPredicted RBP2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 PLPP4Q5VZY2 271 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 RPL7L1Q6DKI1 246 aaKnown RBP2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 SUMO4Q6EEV6 95 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 TMEM207Q6UWW9 146 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 DGAT2L6Q6ZPD8 337 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 HMGN2P46Q86SG4 172 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 OR10G2Q8NGC3 310 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 ZNF564Q8TBZ8 553 aaPredicted RBP2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 RPS4Y2Q8TD47 263 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 COPS9Q8WXC6 57 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 MCEEQ96PE7 176 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 CHCHD5Q9BSY4 110 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 FAM103A1Q9BTL3 118 aaKnown RBP2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 IMUPQ9GZP8 106 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 TP53TG3Q9ULZ0 132 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 SELENOKQ9Y6D0 94 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 AFDNP55196 1824 aaKnown RBP2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 DOCK2Q92608 1830 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 ATAD5Q96QE3 1844 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 SIPA1L3O60292 1781 aaPredicted RBP2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 MON2Q7Z3U7 1717 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 PARP4Q9UKK3 1724 aaKnown RBP2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 NWD2Q9ULI1 1742 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 TRAV8-2A0A0B4J237 113 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 TRBV7-7A0A0K0K1E9 115 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 EPM2AB3EWF7 344 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 ZNF736B4DX44 427 aaPredicted RBP2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 C8orf87E5RJ46 101 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 E9PLD3 99 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 C11orf98E9PRG8 122 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 EPPINO95925 133 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 CD55P08174 381 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 HOXB7P09629 217 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 HLA-DMBP28068 263 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 SNRPFP62306 86 aaKnown RBP2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 PAPPA-AS1Q5QFB9 102 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 ZC2HC1BQ5TFG8 222 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 TEN1Q86WV5 123 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 SLC22A24Q8N4F4 322 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 LINC01465Q8N7H1 131 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 APCDD1LQ8NCL9 501 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 SMRP1Q8NCR6 262 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 OR8B3Q8NGG8 313 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 FGF11Q92914 225 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 NMNAT3Q96T66 252 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 SERP1Q9Y6X1 66 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 ZNF646O15015 1829 aaPredicted RBP2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 NUP210Q8TEM1 1887 aaPredicted RBP2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 PLCH1Q4KWH8 1693 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 TICRRQ7Z2Z1 1910 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 TRAV9-1A0A075B6T8 112 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 TRAV8-4A0A0B4J246 113 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 C2CD4DB7Z1M9 353 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 TIMM23O14925 209 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 NGFP01138 241 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 COX8AP10176 69 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 HLA-DRB4P13762 266 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 CA6P23280 308 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 KRTAP5-9P26371 169 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 UBE2G1P62253 170 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 SNRPGP62308 76 aaKnown RBP2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 SLC25A30Q5SVS4 291 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 RFLNAQ6ZTI6 216 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 LINC00305Q7Z4B0 112 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 SFTPA1Q8IWL2 248 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 DRAM1Q8N682 238 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 RNF182Q8N6D2 247 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 DSCR8Q96T75 97 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 CLEC7AQ9BXN2 247 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 ESM1Q9NQ30 184 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 SLC39A9Q9NUM3 307 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 KCNE3Q9Y6H6 103 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 HLA-DRB4X5D2U9 266 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 SCN8AQ9UQD0 1980 aa2.43□□□□□ -2.02
SNRNP48-202ENST00000496946 KLF18A0A0U1RQI7 1052 aa2.42□□□□□ -2.02
SNRNP48-202ENST00000496946 J3QT63 122 aa2.42□□□□□ -2.02
SNRNP48-202ENST00000496946 NDUFS7O75251 213 aa2.42□□□□□ -2.02
SNRNP48-202ENST00000496946 TCRAP04437 139 aa2.42□□□□□ -2.02
SNRNP48-202ENST00000496946 LGALS2P05162 132 aa2.42□□□□□ -2.02
SNRNP48-202ENST00000496946 RBMY1CP0DJD4 496 aa2.42□□□□□ -2.02
SNRNP48-202ENST00000496946 COX6A1P12074 109 aa2.42□□□□□ -2.02
SNRNP48-202ENST00000496946 IL3RAP26951 378 aa2.42□□□□□ -2.02
SNRNP48-202ENST00000496946 CSN1S1P47710 185 aa2.42□□□□□ -2.02
SNRNP48-202ENST00000496946 LIM2P55344 173 aa2.42□□□□□ -2.02
SNRNP48-202ENST00000496946 RPS11P62280 158 aaKnown RBP eCLIP2.42□□□□□ -2.02
SNRNP48-202ENST00000496946 PAX8Q06710 450 aa2.42□□□□□ -2.02
SNRNP48-202ENST00000496946 DAZAP2Q15038 168 aaPredicted RBP2.42□□□□□ -2.02
SNRNP48-202ENST00000496946 SCGB1D4Q6XE38 83 aa2.42□□□□□ -2.02
SNRNP48-202ENST00000496946 C2orf91Q6ZV80 131 aa2.42□□□□□ -2.02
SNRNP48-202ENST00000496946 PCP2Q8IVA1 136 aa2.42□□□□□ -2.02
SNRNP48-202ENST00000496946 AMN1Q8IY45 258 aa2.42□□□□□ -2.02
SNRNP48-202ENST00000496946 SPACA5Q96QH8 159 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 234 ms