RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 SNRPD3P62318 126 aaKnown RBP3.21□□□□□ -1.89
BRCA1-220ENST00000492859 GNB2P62879 340 aa3.21□□□□□ -1.89
BRCA1-220ENST00000492859 ELOBQ15370 118 aa3.21□□□□□ -1.89
BRCA1-220ENST00000492859 LINC00303Q3SY05 128 aa3.21□□□□□ -1.89
BRCA1-220ENST00000492859 SLC25A42Q86VD7 318 aa3.21□□□□□ -1.89
BRCA1-220ENST00000492859 BPIFA4PQ86YQ2 179 aa3.21□□□□□ -1.89
BRCA1-220ENST00000492859 DSCR8Q96T75 97 aa3.21□□□□□ -1.89
BRCA1-220ENST00000492859 FAM60AQ9NP50 221 aa3.21□□□□□ -1.89
BRCA1-220ENST00000492859 DKK2Q9UBU2 259 aa3.21□□□□□ -1.89
BRCA1-220ENST00000492859 V9GYH0 126 aa3.21□□□□□ -1.89
BRCA1-220ENST00000492859 HEATR5AQ86XA9 2040 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 WIZO95785 1651 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 LAMB1P07942 1786 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 ARFGEF2Q9Y6D5 1785 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 ADAMTS13Q76LX8 1427 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 ADGRB3O60242 1522 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 AHDC1Q5TGY3 1603 aaPredicted RBP3.21□□□□□ -1.9
BRCA1-220ENST00000492859 XRN1Q8IZH2 1706 aaKnown RBP3.21□□□□□ -1.9
BRCA1-220ENST00000492859 TICRRQ7Z2Z1 1910 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 TRGV5A0A0B4J1U4 118 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 IGHV4-28A0A0C4DH34 117 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 MUC21A0A140T8X8 626 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 KRTAP9-7A8MTY7 169 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 TMEM256-PLSCR3K7ERE1 68 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 ETV2O00321 342 aaPredicted RBP3.21□□□□□ -1.9
BRCA1-220ENST00000492859 GNGT2O14610 69 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 SNRNP200O75643 2136 aaKnown RBP3.21□□□□□ -1.9
BRCA1-220ENST00000492859 NDUFB2O95178 105 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 ZNF883P0CG24 379 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 COX7CP15954 63 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 ZFP36P26651 326 aaKnown RBP3.21□□□□□ -1.9
BRCA1-220ENST00000492859 HLA-DMBP28068 263 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 ZNF138P52744 262 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 RBMY1FQ15415 496 aaKnown RBP3.21□□□□□ -1.9
BRCA1-220ENST00000492859 MLF2Q15773 248 aaPredicted RBP3.21□□□□□ -1.9
BRCA1-220ENST00000492859 ZNF79Q15937 498 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 MPV17L2Q567V2 206 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 MUC21Q5SSG8 566 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 DPPA3Q6W0C5 159 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 TMEM91Q6ZNR0 172 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 H2AFVQ71UI9 128 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 MARCH3Q86UD3 253 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 OR8A1Q8NGG7 326 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 MCEEQ96PE7 176 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 TIMM17AQ99595 171 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 VGLL1Q99990 258 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 RHNO1Q9BSD3 238 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 ZNF581Q9P0T4 197 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 LSM2Q9Y333 95 aaKnown RBP3.21□□□□□ -1.9
BRCA1-220ENST00000492859 DNAJC15Q9Y5T4 150 aa3.21□□□□□ -1.9
BRCA1-220ENST00000492859 PTPN23Q9H3S7 1636 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.2□□□□□ -1.9
BRCA1-220ENST00000492859 ADGRB1O14514 1584 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 CFAP74Q9C0B2 1584 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 IGHV3OR16-13A0A075B7E8 117 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 TRBV27A0A0K0K1C4 114 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 K7N7A8 449 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 LYRM1O43325 122 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 NDUFB3O43676 98 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 GYPBP06028 91 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 IGHV4-30-4P0DP06 118 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 CBLN1P23435 193 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 SRSF3P84103 164 aaKnown RBP3.2□□□□□ -1.9
BRCA1-220ENST00000492859 RUSC1-AS1Q66K80 236 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 LGALS9CQ6DKI2 356 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 EBLN2Q6P2I7 272 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 ZNF329Q86UD4 541 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 GGNQ86UU5 652 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 COPS9Q8WXC6 57 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 H1FXQ92522 213 aaKnown RBP3.2□□□□□ -1.9
BRCA1-220ENST00000492859 BBC3Q96PG8 261 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-220ENST00000492859 HIST1H4GQ99525 98 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 GABARAPL3Q9BY60 117 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 SLC35B3Q9H1N7 401 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 SLC39A9Q9NUM3 307 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 TXNL4BQ9NX01 149 aaKnown RBP3.2□□□□□ -1.9
BRCA1-220ENST00000492859 MSRB1Q9NZV6 116 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 HHLA3Q9XRX5 114 aa3.2□□□□□ -1.9
BRCA1-220ENST00000492859 ZNF706Q9Y5V0 76 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-220ENST00000492859 F11RQ9Y624 299 aaKnown RBP3.2□□□□□ -1.9
BRCA1-220ENST00000492859 POLR1AO95602 1720 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-220ENST00000492859 KIAA0556O60303 1618 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 PDCD11Q14690 1871 aaKnown RBP3.19□□□□□ -1.9
BRCA1-220ENST00000492859 KIDINS220Q9ULH0 1771 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 ZNF142P52746 1687 aaPredicted RBP3.19□□□□□ -1.9
BRCA1-220ENST00000492859 RALGAPBQ86X10 1494 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 TRBV24-1A0A075B6N3 115 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 TRAV19A0A0A6YYK7 116 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 TRAV1-1A0A0B4J248 108 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 A0A0D9SEW6 157 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 IGKV1-5P01602 117 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 LINC00271P0C7V0 271 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 INPP1P49441 399 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 HBBP68871 147 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 REG3AQ06141 175 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 KRTAP1-1Q07627 177 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 WFDC2Q14508 124 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 ETDBQ3ZM63 59 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 LINC01545Q5VT33 79 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 PHF5AQ7RTV0 110 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms