RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 TMUB1Q9BVT8 246 aa9.12□□□□□ -0.95
PRKCB-207ENST00000486868 CTDSP1Q9GZU7 261 aa9.12□□□□□ -0.95
PRKCB-207ENST00000486868 PARLQ9H300 379 aa9.12□□□□□ -0.95
PRKCB-207ENST00000486868 OR51M1Q9H341 326 aa9.12□□□□□ -0.95
PRKCB-207ENST00000486868 RPS10P5Q9NQ39 176 aa9.12□□□□□ -0.95
PRKCB-207ENST00000486868 FBXL7Q9UJT9 491 aa9.12□□□□□ -0.95
PRKCB-207ENST00000486868 HIGD1AQ9Y241 93 aa9.12□□□□□ -0.95
PRKCB-207ENST00000486868 LY96Q9Y6Y9 160 aa9.12□□□□□ -0.95
PRKCB-207ENST00000486868 ABCA2Q9BZC7 2435 aa9.11□□□□□ -0.95
PRKCB-207ENST00000486868 TRBV7-1A0A0A6YYK4 115 aa9.11□□□□□ -0.95
PRKCB-207ENST00000486868 TRAV41A0A0B4J266 112 aa9.11□□□□□ -0.95
PRKCB-207ENST00000486868 FAM223BA6NKX1 122 aa9.11□□□□□ -0.95
PRKCB-207ENST00000486868 F8W735 103 aaPredicted RBP9.11□□□□□ -0.95
PRKCB-207ENST00000486868 NDUFB8O95169 186 aa9.11□□□□□ -0.95
PRKCB-207ENST00000486868 FAM223AQ8IWN6 122 aa9.11□□□□□ -0.95
PRKCB-207ENST00000486868 C15orf54Q8N8G6 183 aa9.11□□□□□ -0.95
PRKCB-207ENST00000486868 ZNF491Q8N8L2 437 aa9.11□□□□□ -0.95
PRKCB-207ENST00000486868 OR5AU1Q8NGC0 362 aa9.11□□□□□ -0.95
PRKCB-207ENST00000486868 OR1B1Q8NGR6 318 aa9.11□□□□□ -0.95
PRKCB-207ENST00000486868 ZNF502Q8TBZ5 544 aa9.11□□□□□ -0.95
PRKCB-207ENST00000486868 YTHDF2Q9Y5A9 579 aaKnown RBP9.11□□□□□ -0.95
PRKCB-207ENST00000486868 PTPN13Q12923 2485 aa9.1□□□□□ -0.95
PRKCB-207ENST00000486868 USP9YO00507 2555 aaPredicted RBP9.1□□□□□ -0.95
PRKCB-207ENST00000486868 IGHV3-21A0A0B4J1V1 117 aa9.1□□□□□ -0.95
PRKCB-207ENST00000486868 C9JCJ5 164 aa9.1□□□□□ -0.95
PRKCB-207ENST00000486868 TSPAN4O14817 238 aa9.1□□□□□ -0.95
PRKCB-207ENST00000486868 OR2J3O76001 311 aa9.1□□□□□ -0.95
PRKCB-207ENST00000486868 ORM2P19652 201 aa9.1□□□□□ -0.95
PRKCB-207ENST00000486868 NPPCP23582 126 aa9.1□□□□□ -0.95
PRKCB-207ENST00000486868 ATP5G3P48201 142 aa9.1□□□□□ -0.95
PRKCB-207ENST00000486868 ZNF343Q6P1L6 599 aa9.1□□□□□ -0.95
PRKCB-207ENST00000486868 TMEM219Q86XT9 240 aa9.1□□□□□ -0.95
PRKCB-207ENST00000486868 FXYD5Q96DB9 178 aa9.1□□□□□ -0.95
PRKCB-207ENST00000486868 SHANK2-AS3Q9BTD1 123 aa9.1□□□□□ -0.95
PRKCB-207ENST00000486868 NAV3Q8IVL0 2385 aa9.1□□□□□ -0.95
PRKCB-207ENST00000486868 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.09□□□□□ -0.95
PRKCB-207ENST00000486868 TMEM89A2RUT3 159 aa9.09□□□□□ -0.95
PRKCB-207ENST00000486868 H3BRN7 92 aa9.09□□□□□ -0.95
PRKCB-207ENST00000486868 AP4M1O00189 453 aa9.09□□□□□ -0.95
PRKCB-207ENST00000486868 IER3P46695 156 aa9.09□□□□□ -0.95
PRKCB-207ENST00000486868 CEBPGP53567 150 aa9.09□□□□□ -0.95
PRKCB-207ENST00000486868 UBE2G2P60604 165 aa9.09□□□□□ -0.95
PRKCB-207ENST00000486868 UBE2L3P68036 154 aaKnown RBP9.09□□□□□ -0.95
PRKCB-207ENST00000486868 RHOGP84095 191 aa9.09□□□□□ -0.95
PRKCB-207ENST00000486868 ECSCRQ19T08 205 aa9.09□□□□□ -0.95
PRKCB-207ENST00000486868 DEFB112Q30KQ8 113 aa9.09□□□□□ -0.95
PRKCB-207ENST00000486868 Q56UQ5 140 aa9.09□□□□□ -0.95
PRKCB-207ENST00000486868 FAM209BQ5JX69 171 aa9.09□□□□□ -0.95
PRKCB-207ENST00000486868 Q6YL49 198 aa9.09□□□□□ -0.95
PRKCB-207ENST00000486868 ZNF600Q6ZNG1 722 aa9.09□□□□□ -0.95
PRKCB-207ENST00000486868 EEF1AKMT3Q96AZ1 226 aa9.09□□□□□ -0.95
PRKCB-207ENST00000486868 RNF125Q96EQ8 232 aa9.09□□□□□ -0.95
PRKCB-207ENST00000486868 USMG5Q96IX5 58 aa9.09□□□□□ -0.95
PRKCB-207ENST00000486868 SLC25A39Q9BZJ4 359 aaPredicted RBP9.09□□□□□ -0.95
PRKCB-207ENST00000486868 PRRC2AP48634 2157 aaKnown RBP9.08□□□□□ -0.96
PRKCB-207ENST00000486868 TRAV5A0A0B4J249 113 aa9.08□□□□□ -0.96
PRKCB-207ENST00000486868 NUPL2O15504 423 aaKnown RBP9.08□□□□□ -0.96
PRKCB-207ENST00000486868 NDUFB4O95168 129 aa9.08□□□□□ -0.96
PRKCB-207ENST00000486868 CTSGP08311 255 aa9.08□□□□□ -0.96
PRKCB-207ENST00000486868 HIST1H1EP10412 219 aaKnown RBP9.08□□□□□ -0.96
PRKCB-207ENST00000486868 CD99P14209 185 aa9.08□□□□□ -0.96
PRKCB-207ENST00000486868 GP9P14770 177 aa9.08□□□□□ -0.96
PRKCB-207ENST00000486868 PPIFP30405 207 aaKnown RBP9.08□□□□□ -0.96
PRKCB-207ENST00000486868 MYCNOSP40205 109 aa9.08□□□□□ -0.96
PRKCB-207ENST00000486868 RAB9AP51151 201 aa9.08□□□□□ -0.96
PRKCB-207ENST00000486868 LYZP61626 148 aa9.08□□□□□ -0.96
PRKCB-207ENST00000486868 RPL23P62829 140 aaKnown RBP9.08□□□□□ -0.96
PRKCB-207ENST00000486868 C15orf32Q32M92 178 aa9.08□□□□□ -0.96
PRKCB-207ENST00000486868 RNF212Q495C1 297 aa9.08□□□□□ -0.96
PRKCB-207ENST00000486868 MORN5Q5VZ52 161 aa9.08□□□□□ -0.96
PRKCB-207ENST00000486868 CBLN2Q8IUK8 224 aa9.08□□□□□ -0.96
PRKCB-207ENST00000486868 ANAPC16Q96DE5 110 aa9.08□□□□□ -0.96
PRKCB-207ENST00000486868 NAV2Q8IVL1 2488 aa9.07□□□□□ -0.96
PRKCB-207ENST00000486868 LINC01548A6NM66 108 aa9.07□□□□□ -0.96
PRKCB-207ENST00000486868 COLCA2A8K830 154 aa9.07□□□□□ -0.96
PRKCB-207ENST00000486868 G3V318 75 aa9.07□□□□□ -0.96
PRKCB-207ENST00000486868 MT-ND4LP03901 98 aa9.07□□□□□ -0.96
PRKCB-207ENST00000486868 S100A9P06702 114 aaKnown RBP9.07□□□□□ -0.96
PRKCB-207ENST00000486868 NBEAP1P0C6P0 100 aa9.07□□□□□ -0.96
PRKCB-207ENST00000486868 FOLR2P14207 255 aa9.07□□□□□ -0.96
PRKCB-207ENST00000486868 TAS2R60P59551 318 aa9.07□□□□□ -0.96
PRKCB-207ENST00000486868 ATP5G2Q06055 141 aa9.07□□□□□ -0.96
PRKCB-207ENST00000486868 TMEM88Q6PEY1 159 aa9.07□□□□□ -0.96
PRKCB-207ENST00000486868 BPIFA4PQ86YQ2 179 aa9.07□□□□□ -0.96
PRKCB-207ENST00000486868 LYPD1Q8N2G4 141 aa9.07□□□□□ -0.96
PRKCB-207ENST00000486868 TMEM86BQ8N661 226 aa9.07□□□□□ -0.96
PRKCB-207ENST00000486868 ARL6IP6Q8N6S5 226 aa9.07□□□□□ -0.96
PRKCB-207ENST00000486868 C2CD4CQ8TF44 421 aa9.07□□□□□ -0.96
PRKCB-207ENST00000486868 HIST1H2BAQ96A08 127 aa9.07□□□□□ -0.96
PRKCB-207ENST00000486868 GSX1Q9H4S2 264 aaPredicted RBP9.07□□□□□ -0.96
PRKCB-207ENST00000486868 SCO2A0A1W2PP80 73 aa9.06□□□□□ -0.96
PRKCB-207ENST00000486868 GGTLC3B5MD39 225 aa9.06□□□□□ -0.96
PRKCB-207ENST00000486868 CLDN34H7C241 214 aa9.06□□□□□ -0.96
PRKCB-207ENST00000486868 BMPR1BO00238 502 aa9.06□□□□□ -0.96
PRKCB-207ENST00000486868 PPP1R2P9O14990 202 aa9.06□□□□□ -0.96
PRKCB-207ENST00000486868 IL4P05112 153 aa9.06□□□□□ -0.96
PRKCB-207ENST00000486868 OR10J4P0C629 311 aa9.06□□□□□ -0.96
PRKCB-207ENST00000486868 SUMO1P63165 101 aaKnown RBP9.06□□□□□ -0.96
PRKCB-207ENST00000486868 CFHR3Q02985 330 aa9.06□□□□□ -0.96
PRKCB-207ENST00000486868 RELQ04864 619 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms