RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 RPL8P62917 257 aaKnown RBP3.95□□□□□ -1.78
SF3B1-207ENST00000468925 RPS21P63220 83 aaKnown RBP3.95□□□□□ -1.78
SF3B1-207ENST00000468925 RIGQ13278 110 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 FHL2Q14192 279 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 KIR2DS5Q14953 304 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 PMVKQ15126 192 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 PSG5Q15238 335 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 EFNB3Q15768 340 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 RRN3P1Q2M238 152 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 FAM106AQ4KMX7 169 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 FAM27BQ5VT28 67 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 PMS2CLQ68D20 193 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 MORN3Q6PF18 240 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-207ENST00000468925 ZNF841Q6ZN19 808 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 Q6ZRM9 215 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 SLC25A48Q6ZT89 311 aaKnown RBP3.95□□□□□ -1.78
SF3B1-207ENST00000468925 SSX8Q7RTT4 187 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 MOB3BQ86TA1 216 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 TEN1Q86WV5 123 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 Q8IYB0 196 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 CEND1Q8N111 149 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 SPEM1Q8N4L4 309 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 FADS6Q8N9I5 356 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 RND1Q92730 232 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 BADQ92934 168 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 ST6GALNAC6Q969X2 333 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 RAB37Q96AX2 223 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 AJUBAQ96IF1 538 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 LYZL4Q96KX0 146 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 IGF2BP2-AS1Q96M15 143 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 HSD17B10Q99714 261 aaKnown RBP3.95□□□□□ -1.78
SF3B1-207ENST00000468925 IMUPQ9GZP8 106 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 RAB9BQ9NP90 201 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 IL23AQ9NPF7 189 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 PRO0461Q9UI25 63 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 ERRFI1Q9UJM3 462 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-207ENST00000468925 LSM4Q9Y4Z0 139 aaKnown RBP3.95□□□□□ -1.78
SF3B1-207ENST00000468925 PCNX3Q9H6A9 2034 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 SHANK1Q9Y566 2161 aa3.95□□□□□ -1.78
SF3B1-207ENST00000468925 POLR2AP24928 1970 aaKnown RBP3.94□□□□□ -1.78
SF3B1-207ENST00000468925 LRRK1Q38SD2 2015 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 IGLV3-32A0A0A0MS00 114 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 IGKV1D-13A0A0B4J2D9 117 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 SPAARA0A1B0GVQ0 90 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 TCRBV4S1A1TA0A5B7 111 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 HIGD1CA8MV81 97 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 J3KT08 172 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 SCGB2A1O75556 95 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 ATP5LO75964 103 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 MOSP00540 346 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 IGKV1-39P01597 117 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 IGKV1D-39P04432 117 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 SLC25A5P05141 298 aaKnown RBP3.94□□□□□ -1.78
SF3B1-207ENST00000468925 SCTP09683 121 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 CISD3P0C7P0 127 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 IGKV1-13P0DP09 117 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 ACP1P24666 158 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 FCGR2BP31994 310 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-207ENST00000468925 VDAC2P45880 294 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-207ENST00000468925 MEOX1P50221 254 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 EDDM3BP56851 147 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 TFF3Q07654 80 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 WFDC2Q14508 124 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 ZNF542PQ5EBM4 170 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 CFAP126Q5VTH2 177 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 SPATA31B1PQ5VZV4 182 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 SBSPONQ8IVN8 264 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 Q8N7P7 452 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 PRSS3P2Q8NHM4 247 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 FLVCR1-AS1Q8TAF5 88 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 PHLDA1Q8WV24 401 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-207ENST00000468925 NEU4Q8WWR8 484 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-207ENST00000468925 DAZAP1Q96EP5 407 aaKnown RBP3.94□□□□□ -1.78
SF3B1-207ENST00000468925 ZNF414Q96IQ9 312 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 LINC01600Q96MT4 127 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 PRELID3AQ96N28 172 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 FAM234AQ9H0X4 552 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 NXF5Q9H1B4 397 aaKnown RBP3.94□□□□□ -1.78
SF3B1-207ENST00000468925 RNASE7Q9H1E1 156 aaKnown RBP3.94□□□□□ -1.78
SF3B1-207ENST00000468925 RPP21Q9H633 154 aaKnown RBP3.94□□□□□ -1.78
SF3B1-207ENST00000468925 MDFICQ9P1T7 246 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 VPREB3Q9UKI3 123 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 TNRC6AQ8NDV7 1962 aaKnown RBP3.94□□□□□ -1.78
SF3B1-207ENST00000468925 COL4A5P29400 1685 aa3.94□□□□□ -1.78
SF3B1-207ENST00000468925 IGKV1D-43A0A0B4J1Z2 117 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 A0A0G2JNJ9 132 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 TRBV6-1A0A0K0K1D8 114 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 C15orf62A8K5M9 175 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 C17orf100A8MU93 164 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 A8MWV9 139 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 C15orf65H3BRN8 121 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 TNFSF12O43508 249 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 IGLV2-8P01709 118 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 HBDP02042 147 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 STATHP02808 62 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 IGKV3-11P04433 115 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 IL4P05112 153 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 C8orf88P0DMB2 117 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 SCGB1C2P0DMR2 95 aa3.93□□□□□ -1.78
SF3B1-207ENST00000468925 CRYGSP22914 178 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms