RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 SLAMF6Q96DU3 332 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 GPX7Q96SL4 187 aaPredicted RBP1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 HIST1H2BNQ99877 126 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 HIST1H2BMQ99879 126 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 CCDC90BQ9GZT6 254 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 FAM107BQ9H098 131 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 CCDC88AQ3V6T2 1871 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 TRPM1Q7Z4N2 1603 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 STRCQ7RTU9 1775 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 N4BP2Q86UW6 1770 aaPredicted RBP1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 TOPBP1Q92547 1522 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 A0A1B0GX51 115 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 OR51F1A6NGY5 319 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 RIIAD1A6NNX1 92 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 E7EQ34 232 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 M0R378 163 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 AIPO00170 330 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 SLC22A1O15245 554 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 PFDN1O60925 122 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 IFNA7P01567 189 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 FKBP2P26885 142 aaKnown RBP1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 RNASE4P34096 147 aaKnown RBP1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 EVX1P49640 407 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 LINC01554Q52M75 96 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 Q5XG85 94 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 RPL22L1Q6P5R6 122 aaKnown RBP1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 HRCT1Q6UXD1 115 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 Q6ZRN7 208 aaPredicted RBP1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 COA5Q86WW8 74 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 MALSU1Q96EH3 234 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 HSPB9Q9BQS6 159 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 PBDC1Q9BVG4 233 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 NUBP2Q9Y5Y2 271 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 BCL9O00512 1426 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 ARHGEF28Q8N1W1 1705 aaKnown RBP1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 FER1L6Q2WGJ9 1857 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 GREB1Q4ZG55 1949 aa1.62□□□□□ -2.15
CDC42BPA-211ENST00000466538 MED1Q15648 1581 aaPredicted RBP1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 RGS12O14924 1447 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 TRBV10-2A0A0K0K1G8 114 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 TRDV1A0A1B0GX56 115 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 MEIS3P1A6NDR6 274 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 EFCAB10A6NFE3 127 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 GGT3PA6NGU5 568 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 FABP5P3A8MUU1 101 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 C19orf84I3L1E1 186 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 IFNA10P01566 189 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 PSG9Q00887 426 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 OR8B8Q15620 311 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 RRN3P1Q2M238 152 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 BRMS1LQ5PSV4 323 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 FAM27BQ5VT28 67 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 FKBP1CQ5VVH2 108 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 PRR15Q8IV56 129 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 OR4D11Q8NGI4 311 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 OR9Q1Q8NGQ5 310 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 ZNF563Q8TA94 476 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 WFDC5Q8TCV5 224 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 ZC2HC1AQ96GY0 325 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 ZNF625Q96I27 306 aaPredicted RBP1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 TEX37Q96LM6 180 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 RTL8AQ9BWD3 113 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 IMUPQ9GZP8 106 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 CST9LQ9H4G1 147 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 PCTPQ9UKL6 214 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 MALRD1Q5VYJ5 2156 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 DOCK10Q96BY6 2186 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 HEATR5AQ86XA9 2040 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 CCDC88CQ9P219 2028 aa1.61□□□□□ -2.15
CDC42BPA-211ENST00000466538 TRGV2A0A075B6R0 118 aa1.6□□□□□ -2.15
CDC42BPA-211ENST00000466538 TRAV36DV7A0A075B6V5 113 aa1.6□□□□□ -2.15
CDC42BPA-211ENST00000466538 DUXBA0A1W2PPF3 345 aa1.6□□□□□ -2.15
CDC42BPA-211ENST00000466538 AKR1C3P42330 323 aa1.6□□□□□ -2.15
CDC42BPA-211ENST00000466538 GTF2A1P52655 376 aaPredicted RBP1.6□□□□□ -2.15
CDC42BPA-211ENST00000466538 FXYD2P54710 66 aa1.6□□□□□ -2.15
CDC42BPA-211ENST00000466538 SMIM21Q3B7S5 101 aa1.6□□□□□ -2.15
CDC42BPA-211ENST00000466538 CCDC153Q494R4 210 aa1.6□□□□□ -2.15
CDC42BPA-211ENST00000466538 SCGB2B2Q4G0G5 96 aa1.6□□□□□ -2.15
CDC42BPA-211ENST00000466538 ANGPTL5Q86XS5 388 aa1.6□□□□□ -2.15
CDC42BPA-211ENST00000466538 CLVS1Q8IUQ0 354 aaPredicted RBP1.6□□□□□ -2.15
CDC42BPA-211ENST00000466538 STAG3L4Q8TBR4 150 aa1.6□□□□□ -2.15
CDC42BPA-211ENST00000466538 MBD3L1Q8WWY6 194 aa1.6□□□□□ -2.15
CDC42BPA-211ENST00000466538 TCEAL4Q96EI5 215 aa1.6□□□□□ -2.15
CDC42BPA-211ENST00000466538 TMEM70Q9BUB7 260 aa1.6□□□□□ -2.15
CDC42BPA-211ENST00000466538 OTORQ9NRC9 128 aa1.6□□□□□ -2.15
CDC42BPA-211ENST00000466538 MED31Q9Y3C7 131 aa1.6□□□□□ -2.15
CDC42BPA-211ENST00000466538 NUP98P52948 1817 aa1.6□□□□□ -2.15
CDC42BPA-211ENST00000466538 COL4A1P02462 1669 aa1.6□□□□□ -2.15
CDC42BPA-211ENST00000466538 CPAMD8Q8IZJ3 1885 aa1.6□□□□□ -2.15
CDC42BPA-211ENST00000466538 FRMPD1Q5SYB0 1578 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 PIK3C2AO00443 1686 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 CAMSAP2Q08AD1 1489 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 TMEM212A6NML5 194 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 J3KT08 172 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 TAX1BP3O14907 124 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 DEGS1O15121 323 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 ZNF737O75373 536 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 BANF1O75531 89 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 GADD45GO95257 159 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 TRGC2P03986 189 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms