RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 C5orf24Q7Z6I8 188 aa11.03□□□□□ -0.64
CHRNA4-202ENST00000463705 F11RQ9Y624 299 aaKnown RBP11.03□□□□□ -0.64
CHRNA4-202ENST00000463705 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.03□□□□□ -0.64
CHRNA4-202ENST00000463705 H7C2G1 150 aa11.03□□□□□ -0.64
CHRNA4-202ENST00000463705 C5orf64Q2M2E5 130 aa11.03□□□□□ -0.64
CHRNA4-202ENST00000463705 TMEM170BQ5T4T1 132 aa11.03□□□□□ -0.64
CHRNA4-202ENST00000463705 Q8TCH9 128 aa11.03□□□□□ -0.64
CHRNA4-202ENST00000463705 MGST2Q99735 147 aa11.03□□□□□ -0.64
CHRNA4-202ENST00000463705 ST20Q9HBF5 79 aa11.03□□□□□ -0.64
CHRNA4-202ENST00000463705 TICRRQ7Z2Z1 1910 aa11.03□□□□□ -0.64
CHRNA4-202ENST00000463705 LINC01549A6NIU2 74 aa11.02□□□□□ -0.64
CHRNA4-202ENST00000463705 SMIM13P0DJ93 91 aa11.02□□□□□ -0.64
CHRNA4-202ENST00000463705 ATOH7Q8N100 152 aa11.02□□□□□ -0.64
CHRNA4-202ENST00000463705 OCC1Q8TAD7 63 aa11.02□□□□□ -0.64
CHRNA4-202ENST00000463705 LY96Q9Y6Y9 160 aa11.02□□□□□ -0.64
CHRNA4-202ENST00000463705 FRMPD3Q5JV73 1810 aa11.02□□□□□ -0.64
CHRNA4-202ENST00000463705 PLXNA2O75051 1894 aa11.02□□□□□ -0.64
CHRNA4-202ENST00000463705 TMEM262E9PQX1 116 aa11.02□□□□□ -0.64
CHRNA4-202ENST00000463705 NDUFS8O00217 210 aa11.02□□□□□ -0.64
CHRNA4-202ENST00000463705 FOXC2Q99958 501 aa11.02□□□□□ -0.64
CHRNA4-202ENST00000463705 NXT2Q9NPJ8 142 aaKnown RBP11.02□□□□□ -0.64
CHRNA4-202ENST00000463705 CD7P09564 240 aa11.02□□□□□ -0.65
CHRNA4-202ENST00000463705 ADMP35318 185 aa11.02□□□□□ -0.65
CHRNA4-202ENST00000463705 COTL1Q14019 142 aa11.02□□□□□ -0.65
CHRNA4-202ENST00000463705 ANAPC1Q9H1A4 1944 aa11.02□□□□□ -0.65
CHRNA4-202ENST00000463705 TTC9CQ8N5M4 171 aa11.02□□□□□ -0.65
CHRNA4-202ENST00000463705 OR5AN1Q8NGI8 311 aa11.02□□□□□ -0.65
CHRNA4-202ENST00000463705 C18orf15Q96N68 181 aa11.02□□□□□ -0.65
CHRNA4-202ENST00000463705 FAM223BA6NKX1 122 aa11.01□□□□□ -0.65
CHRNA4-202ENST00000463705 GATA4P43694 442 aa11.01□□□□□ -0.65
CHRNA4-202ENST00000463705 RASL11AQ6T310 242 aa11.01□□□□□ -0.65
CHRNA4-202ENST00000463705 FAM223AQ8IWN6 122 aa11.01□□□□□ -0.65
CHRNA4-202ENST00000463705 SLC25A39Q9BZJ4 359 aaPredicted RBP11.01□□□□□ -0.65
CHRNA4-202ENST00000463705 PROK2Q9HC23 129 aa11.01□□□□□ -0.65
CHRNA4-202ENST00000463705 A0A1W2PRX2 142 aa11.01□□□□□ -0.65
CHRNA4-202ENST00000463705 WISP1O95388 367 aa11.01□□□□□ -0.65
CHRNA4-202ENST00000463705 TMEM50AO95807 157 aa11.01□□□□□ -0.65
CHRNA4-202ENST00000463705 C15orf32Q32M92 178 aa11.01□□□□□ -0.65
CHRNA4-202ENST00000463705 CHCHD1Q96BP2 118 aaKnown RBP11.01□□□□□ -0.65
CHRNA4-202ENST00000463705 USMG5Q96IX5 58 aa11.01□□□□□ -0.65
CHRNA4-202ENST00000463705 PSMB11A5LHX3 300 aa11.01□□□□□ -0.65
CHRNA4-202ENST00000463705 LINC00473A8K010 186 aa11.01□□□□□ -0.65
CHRNA4-202ENST00000463705 C10orf55Q5SWW7 151 aa11.01□□□□□ -0.65
CHRNA4-202ENST00000463705 AGMATQ9BSE5 352 aa11.01□□□□□ -0.65
CHRNA4-202ENST00000463705 ANAPC10Q9UM13 185 aa11.01□□□□□ -0.65
CHRNA4-202ENST00000463705 PSG1P11464 419 aa11.01□□□□□ -0.65
CHRNA4-202ENST00000463705 KLRD1Q13241 179 aa11.01□□□□□ -0.65
CHRNA4-202ENST00000463705 LMO1P25800 156 aa11□□□□□ -0.65
CHRNA4-202ENST00000463705 LINC01559Q495D7 138 aa11□□□□□ -0.65
CHRNA4-202ENST00000463705 ZNF524Q96C55 264 aa11□□□□□ -0.65
CHRNA4-202ENST00000463705 SIGLEC9Q9Y336 463 aa11□□□□□ -0.65
CHRNA4-202ENST00000463705 TRBV24-1A0A075B6N3 115 aa11□□□□□ -0.65
CHRNA4-202ENST00000463705 SRSF1Q07955 248 aaKnown RBP eCLIP11□□□□□ -0.65
CHRNA4-202ENST00000463705 PEF1Q9UBV8 284 aaKnown RBP11□□□□□ -0.65
CHRNA4-202ENST00000463705 TRGV2A0A075B6R0 118 aa11□□□□□ -0.65
CHRNA4-202ENST00000463705 SERF1AO75920 110 aa11□□□□□ -0.65
CHRNA4-202ENST00000463705 PLP1P60201 277 aa11□□□□□ -0.65
CHRNA4-202ENST00000463705 ORMDL2Q53FV1 153 aa11□□□□□ -0.65
CHRNA4-202ENST00000463705 LYPD1Q8N2G4 141 aa11□□□□□ -0.65
CHRNA4-202ENST00000463705 PRDM13Q9H4Q3 707 aa11□□□□□ -0.65
CHRNA4-202ENST00000463705 C9orf139Q6ZV77 190 aa11□□□□□ -0.65
CHRNA4-202ENST00000463705 HBDP02042 147 aa10.99□□□□□ -0.65
CHRNA4-202ENST00000463705 BEND2Q8NDZ0 799 aa10.99□□□□□ -0.65
CHRNA4-202ENST00000463705 PHF3Q92576 2039 aaKnown RBP10.99□□□□□ -0.65
CHRNA4-202ENST00000463705 TRAV3A0A0B4J244 114 aa10.99□□□□□ -0.65
CHRNA4-202ENST00000463705 TRAV5A0A0B4J249 113 aa10.99□□□□□ -0.65
CHRNA4-202ENST00000463705 MUC21A0A0G2JKD1 596 aa10.99□□□□□ -0.65
CHRNA4-202ENST00000463705 MUC21A0A140T8X8 626 aa10.99□□□□□ -0.65
CHRNA4-202ENST00000463705 E7EQL1 145 aa10.99□□□□□ -0.65
CHRNA4-202ENST00000463705 MUC21Q5SSG8 566 aa10.99□□□□□ -0.65
CHRNA4-202ENST00000463705 TRAV8-6A0A0B4J262 113 aa10.99□□□□□ -0.65
CHRNA4-202ENST00000463705 IGKV3OR2-268A0A0C4DH90 116 aa10.99□□□□□ -0.65
CHRNA4-202ENST00000463705 FOXL1Q12952 345 aa10.99□□□□□ -0.65
CHRNA4-202ENST00000463705 DOCK8Q8NF50 2099 aa10.99□□□□□ -0.65
CHRNA4-202ENST00000463705 INTS1Q8N201 2190 aaKnown RBP10.99□□□□□ -0.65
CHRNA4-202ENST00000463705 TOMM40O96008 361 aa10.99□□□□□ -0.65
CHRNA4-202ENST00000463705 PRTN3P24158 256 aa10.99□□□□□ -0.65
CHRNA4-202ENST00000463705 ZNF585BQ52M93 769 aa10.99□□□□□ -0.65
CHRNA4-202ENST00000463705 MRAP2Q96G30 205 aa10.99□□□□□ -0.65
CHRNA4-202ENST00000463705 NRN1Q9NPD7 142 aa10.99□□□□□ -0.65
CHRNA4-202ENST00000463705 RPP25LQ8N5L8 163 aaKnown RBP10.98□□□□□ -0.65
CHRNA4-202ENST00000463705 PGPEP1LA6NFU8 196 aa10.98□□□□□ -0.65
CHRNA4-202ENST00000463705 GATA3P23771 443 aa10.98□□□□□ -0.65
CHRNA4-202ENST00000463705 COL8A2P25067 703 aa10.98□□□□□ -0.65
CHRNA4-202ENST00000463705 CEACAM8P31997 349 aaPredicted RBP10.98□□□□□ -0.65
CHRNA4-202ENST00000463705 IFI27P40305 119 aaPredicted RBP10.98□□□□□ -0.65
CHRNA4-202ENST00000463705 SPATA31B1PQ5VZV4 182 aa10.98□□□□□ -0.65
CHRNA4-202ENST00000463705 LINC01356Q8N9X3 169 aa10.98□□□□□ -0.65
CHRNA4-202ENST00000463705 REG4Q9BYZ8 158 aa10.98□□□□□ -0.65
CHRNA4-202ENST00000463705 ROS1P08922 2347 aa10.98□□□□□ -0.65
CHRNA4-202ENST00000463705 C15orf62A8K5M9 175 aa10.97□□□□□ -0.65
CHRNA4-202ENST00000463705 C21orf62-AS1Q17RA5 79 aa10.97□□□□□ -0.65
CHRNA4-202ENST00000463705 NUDT10Q8NFP7 164 aa10.97□□□□□ -0.65
CHRNA4-202ENST00000463705 NUDT11Q96G61 164 aa10.97□□□□□ -0.65
CHRNA4-202ENST00000463705 CRIM1Q9NZV1 1036 aa10.97□□□□□ -0.65
CHRNA4-202ENST00000463705 TCRAP04437 139 aa10.97□□□□□ -0.65
CHRNA4-202ENST00000463705 LINC00614P0C842 121 aa10.97□□□□□ -0.65
CHRNA4-202ENST00000463705 CTAG1AP78358 180 aa10.97□□□□□ -0.65
CHRNA4-202ENST00000463705 LYPD2Q6UXB3 125 aa10.97□□□□□ -0.65
CHRNA4-202ENST00000463705 DTX1Q86Y01 620 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms