RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 SMIM7Q9BQ49 75 aa6.3□□□□□ -1.4
SFPQ-202ENST00000460428 GAR1Q9NY12 217 aaKnown RBP6.3□□□□□ -1.4
SFPQ-202ENST00000460428 C21orf62Q9NYP8 219 aa6.3□□□□□ -1.4
SFPQ-202ENST00000460428 HIGD1AQ9Y241 93 aa6.3□□□□□ -1.4
SFPQ-202ENST00000460428 COL12A1Q99715 3063 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 WNK2Q9Y3S1 2297 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 IGHV3-21A0A0B4J1V1 117 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 TRAV5A0A0B4J249 113 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 LINC01548A6NM66 108 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 MRPS12O15235 138 aaKnown RBP6.29□□□□□ -1.4
SFPQ-202ENST00000460428 OR7C2O60412 319 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 SCGB2A1O75556 95 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 NDUFB4O95168 129 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 TGFAP01135 160 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 MT-ND4LP03901 98 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 CTSGP08311 255 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 CD99P14209 185 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 ORM2P19652 201 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 PPIFP30405 207 aaKnown RBP6.29□□□□□ -1.4
SFPQ-202ENST00000460428 UBE2G2P60604 165 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 AKAP6Q13023 2319 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 SPTAN1Q13813 2472 aaKnown RBP6.29□□□□□ -1.4
SFPQ-202ENST00000460428 CST9LP1Q5W188 147 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 IQCF2Q8IXL9 164 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 OR5T1Q8NG75 326 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 OR1B1Q8NGR6 318 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 OR5R1Q8NH85 324 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 Q8WTZ3 238 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 ANAPC16Q96DE5 110 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 ZNF414Q96IQ9 312 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 SHANK2-AS3Q9BTD1 123 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 PAXXQ9BUH6 204 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 C20orf24Q9BUV8 137 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 TMUB1Q9BVT8 246 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 SLC25A39Q9BZJ4 359 aaPredicted RBP6.29□□□□□ -1.4
SFPQ-202ENST00000460428 GSX1Q9H4S2 264 aaPredicted RBP6.29□□□□□ -1.4
SFPQ-202ENST00000460428 FBXL7Q9UJT9 491 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 RNF24Q9Y225 148 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 MYO18BQ8IUG5 2567 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 MED13LQ71F56 2210 aa6.29□□□□□ -1.4
SFPQ-202ENST00000460428 PRRC2AP48634 2157 aaKnown RBP6.28□□□□□ -1.4
SFPQ-202ENST00000460428 TRBV7-1A0A0A6YYK4 115 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 TRAV41A0A0B4J266 112 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 FAM223BA6NKX1 122 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 GGTLC3B5MD39 225 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 H3BRN7 92 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 H3BUX3 64 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 NUPL2O15504 423 aaKnown RBP6.28□□□□□ -1.4
SFPQ-202ENST00000460428 GNG7O60262 68 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 OR2J3O76001 311 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 GP9P14770 177 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 IER3P46695 156 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 CEBPGP53567 150 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 TAS2R60P59551 318 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 CFHR3Q02985 330 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 CYB5R2Q6BCY4 276 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 LINC01551Q86U37 167 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 FAM223AQ8IWN6 122 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 TEX29Q8N6K0 151 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 C2CD4CQ8TF44 421 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 RNF125Q96EQ8 232 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 Q96MF0 132 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 FOXC2Q99958 501 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 SOX21Q9Y651 276 aaPredicted RBP6.28□□□□□ -1.4
SFPQ-202ENST00000460428 CR1P17927 2039 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 FBN2P35556 2912 aa6.28□□□□□ -1.4
SFPQ-202ENST00000460428 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.27□□□□□ -1.412e-9■■■□□ 18.9
SFPQ-202ENST00000460428 SCO2A0A1W2PP80 73 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 TMEM89A2RUT3 159 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 G3V318 75 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 CLDN34H7C241 214 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 NBEAP1P0C6P0 100 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 PYYP10082 97 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 HIST1H1EP10412 219 aaKnown RBP6.27□□□□□ -1.41
SFPQ-202ENST00000460428 S100A7P31151 101 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 ADMP35318 185 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 SUMO1P63165 101 aaKnown RBP6.27□□□□□ -1.41
SFPQ-202ENST00000460428 UBE2L3P68036 154 aaKnown RBP6.27□□□□□ -1.41
SFPQ-202ENST00000460428 RHOGP84095 191 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 ELOBQ15370 118 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 DEFB112Q30KQ8 113 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 Q6YL49 198 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 TMEM219Q86XT9 240 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 C1QL4Q86Z23 238 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 LYPD1Q8N2G4 141 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 ARL6IP6Q8N6S5 226 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 HIST1H2BAQ96A08 127 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 ISOC2Q96AB3 205 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 IMMP2LQ96T52 175 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 PYGO2Q9BRQ0 406 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 ELOVL1Q9BW60 279 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 KLF12Q9Y4X4 402 aa6.27□□□□□ -1.41
SFPQ-202ENST00000460428 TRBV20OR9-2A0A075B6H5 130 aa6.26□□□□□ -1.41
SFPQ-202ENST00000460428 TRBV24-1A0A075B6N3 115 aa6.26□□□□□ -1.41
SFPQ-202ENST00000460428 HELTA6NFD8 242 aa6.26□□□□□ -1.41
SFPQ-202ENST00000460428 ZNF98A6NK75 572 aa6.26□□□□□ -1.41
SFPQ-202ENST00000460428 AP4M1O00189 453 aa6.26□□□□□ -1.41
SFPQ-202ENST00000460428 IGLV1-40P01703 118 aa6.26□□□□□ -1.41
SFPQ-202ENST00000460428 IL4P05112 153 aa6.26□□□□□ -1.41
SFPQ-202ENST00000460428 PFN1P07737 140 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms