RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 A0A1W2PN81 502 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 SLC25A5P05141 298 aaKnown RBP9.51□□□□□ -0.89
PTPRN-204ENST00000423636 POU2AF1Q16633 256 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 ST6GALNAC3Q8NDV1 305 aa9.51□□□□□ -0.89
PTPRN-204ENST00000423636 SNURFLB1AK76 121 aa9.5□□□□□ -0.89
PTPRN-204ENST00000423636 ITGB1BP1O14713 200 aa9.5□□□□□ -0.89
PTPRN-204ENST00000423636 PSG1P11464 419 aa9.5□□□□□ -0.89
PTPRN-204ENST00000423636 KCNIP4Q6PIL6 250 aa9.5□□□□□ -0.89
PTPRN-204ENST00000423636 MMD2Q8IY49 270 aa9.5□□□□□ -0.89
PTPRN-204ENST00000423636 OR1L6Q8NGR2 347 aa9.5□□□□□ -0.89
PTPRN-204ENST00000423636 OR1P1Q8NH06 330 aa9.5□□□□□ -0.89
PTPRN-204ENST00000423636 CTDSP1Q9GZU7 261 aa9.5□□□□□ -0.89
PTPRN-204ENST00000423636 RAB1BQ9H0U4 201 aa9.5□□□□□ -0.89
PTPRN-204ENST00000423636 LOC105371242A0A075B767 164 aa9.5□□□□□ -0.89
PTPRN-204ENST00000423636 S100A8P05109 93 aa9.5□□□□□ -0.89
PTPRN-204ENST00000423636 TMEM219Q86XT9 240 aa9.5□□□□□ -0.89
PTPRN-204ENST00000423636 OR51M1Q9H341 326 aa9.5□□□□□ -0.89
PTPRN-204ENST00000423636 MAS1LP35410 378 aa9.49□□□□□ -0.89
PTPRN-204ENST00000423636 RAB1CQ92928 201 aa9.49□□□□□ -0.89
PTPRN-204ENST00000423636 TPPP3Q9BW30 176 aa9.49□□□□□ -0.89
PTPRN-204ENST00000423636 AMMECR1Q9Y4X0 333 aaPredicted RBP9.49□□□□□ -0.89
PTPRN-204ENST00000423636 HTR1DP28221 377 aa9.49□□□□□ -0.89
PTPRN-204ENST00000423636 TCF24Q7RTU0 167 aa9.49□□□□□ -0.89
PTPRN-204ENST00000423636 MAPK1IP1LQ8NDC0 245 aa9.49□□□□□ -0.89
PTPRN-204ENST00000423636 MS4A10Q96PG2 267 aa9.49□□□□□ -0.89
PTPRN-204ENST00000423636 BPESC1Q9GZL8 116 aa9.49□□□□□ -0.89
PTPRN-204ENST00000423636 LINC01548A6NM66 108 aa9.49□□□□□ -0.89
PTPRN-204ENST00000423636 LIPFP07098 398 aa9.49□□□□□ -0.89
PTPRN-204ENST00000423636 SMIM6P0DI80 62 aa9.49□□□□□ -0.89
PTPRN-204ENST00000423636 NDPQ00604 133 aa9.49□□□□□ -0.89
PTPRN-204ENST00000423636 VMO1Q7Z5L0 202 aa9.49□□□□□ -0.89
PTPRN-204ENST00000423636 VSTM2AQ8TAG5 236 aa9.49□□□□□ -0.89
PTPRN-204ENST00000423636 WNK1Q9H4A3 2382 aa9.49□□□□□ -0.89
PTPRN-204ENST00000423636 TCRBV4S1A1TA0A5B7 111 aa9.48□□□□□ -0.89
PTPRN-204ENST00000423636 ZNF207O43670 478 aaKnown RBP9.48□□□□□ -0.89
PTPRN-204ENST00000423636 ZNF137PP52743 207 aa9.48□□□□□ -0.89
PTPRN-204ENST00000423636 CTAG1AP78358 180 aa9.48□□□□□ -0.89
PTPRN-204ENST00000423636 BRD3OSQ6XYD6 125 aa9.48□□□□□ -0.89
PTPRN-204ENST00000423636 ANAPC16Q96DE5 110 aa9.48□□□□□ -0.89
PTPRN-204ENST00000423636 NAT8BQ9UHF3 227 aa9.48□□□□□ -0.89
PTPRN-204ENST00000423636 MTORP42345 2549 aa9.48□□□□□ -0.89
PTPRN-204ENST00000423636 M0QZ24 198 aa9.48□□□□□ -0.89
PTPRN-204ENST00000423636 SCGB1D1O95968 90 aa9.48□□□□□ -0.89
PTPRN-204ENST00000423636 IQCJQ1A5X6 159 aa9.48□□□□□ -0.89
PTPRN-204ENST00000423636 BAGE2Q86Y30 109 aa9.48□□□□□ -0.89
PTPRN-204ENST00000423636 TMEM242Q9NWH2 141 aa9.48□□□□□ -0.89
PTPRN-204ENST00000423636 KAAG1Q9UBP8 84 aa9.48□□□□□ -0.89
PTPRN-204ENST00000423636 NIPBLQ6KC79 2804 aaeCLIP9.48□□□□□ -0.89
PTPRN-204ENST00000423636 TEX22C9J3V5 150 aa9.48□□□□□ -0.89
PTPRN-204ENST00000423636 M0R3E3 92 aa9.48□□□□□ -0.89
PTPRN-204ENST00000423636 OR2J3O76001 311 aa9.48□□□□□ -0.89
PTPRN-204ENST00000423636 VENTXO95231 258 aa9.48□□□□□ -0.89
PTPRN-204ENST00000423636 SUB1P53999 127 aaKnown RBP eCLIP9.48□□□□□ -0.89
PTPRN-204ENST00000423636 USF2Q15853 346 aaPredicted RBP9.48□□□□□ -0.89
PTPRN-204ENST00000423636 ECSCRQ19T08 205 aa9.48□□□□□ -0.89
PTPRN-204ENST00000423636 LINC00322Q6ZN03 302 aaPredicted RBP9.48□□□□□ -0.89
PTPRN-204ENST00000423636 FAM19A2Q8N3H0 131 aa9.48□□□□□ -0.89
PTPRN-204ENST00000423636 TIMD4Q96H15 378 aa9.48□□□□□ -0.89
PTPRN-204ENST00000423636 MRPL18Q9H0U6 180 aaKnown RBP9.48□□□□□ -0.89
PTPRN-204ENST00000423636 TMSB15BA0A087X1C1 80 aa9.47□□□□□ -0.89
PTPRN-204ENST00000423636 MC5RP33032 325 aa9.47□□□□□ -0.89
PTPRN-204ENST00000423636 COMPP49747 757 aaPredicted RBP9.47□□□□□ -0.89
PTPRN-204ENST00000423636 CNN1P51911 297 aaKnown RBP9.47□□□□□ -0.89
PTPRN-204ENST00000423636 RPL19P84098 196 aaKnown RBP9.47□□□□□ -0.89
PTPRN-204ENST00000423636 TDRG1Q3Y452 100 aa9.47□□□□□ -0.89
PTPRN-204ENST00000423636 IBA57Q5T440 356 aaKnown RBP9.47□□□□□ -0.89
PTPRN-204ENST00000423636 OR2T8A6NH00 312 aa9.47□□□□□ -0.89
PTPRN-204ENST00000423636 RNF224P0DH78 156 aa9.47□□□□□ -0.89
PTPRN-204ENST00000423636 FCGR2BP31994 310 aaPredicted RBP9.47□□□□□ -0.89
PTPRN-204ENST00000423636 TAS2R45P59539 299 aa9.47□□□□□ -0.89
PTPRN-204ENST00000423636 LINC00469Q8N7U9 141 aa9.47□□□□□ -0.89
PTPRN-204ENST00000423636 NCOR1P1Q9H4R4 102 aa9.47□□□□□ -0.89
PTPRN-204ENST00000423636 BAGE3Q86Y29 109 aa9.46□□□□□ -0.89
PTPRN-204ENST00000423636 CIARTQ8N365 385 aaPredicted RBP9.46□□□□□ -0.89
PTPRN-204ENST00000423636 RBM14Q96PK6 669 aaKnown RBP9.46□□□□□ -0.89
PTPRN-204ENST00000423636 CBLN4Q9NTU7 201 aa9.46□□□□□ -0.89
PTPRN-204ENST00000423636 V9GYV3 84 aa9.46□□□□□ -0.89
PTPRN-204ENST00000423636 GGCTO75223 188 aaKnown RBP9.46□□□□□ -0.9
PTPRN-204ENST00000423636 NDUFS6O75380 124 aaKnown RBP9.46□□□□□ -0.9
PTPRN-204ENST00000423636 TMEM11P17152 192 aa9.46□□□□□ -0.9
PTPRN-204ENST00000423636 ACTL10Q5JWF8 245 aa9.46□□□□□ -0.9
PTPRN-204ENST00000423636 FXYD5Q96DB9 178 aa9.46□□□□□ -0.9
PTPRN-204ENST00000423636 PITPNC1Q9UKF7 332 aa9.46□□□□□ -0.9
PTPRN-204ENST00000423636 PSMB11A5LHX3 300 aa9.46□□□□□ -0.9
PTPRN-204ENST00000423636 IL4P05112 153 aa9.46□□□□□ -0.9
PTPRN-204ENST00000423636 NBEAP1P0C6P0 100 aa9.46□□□□□ -0.9
PTPRN-204ENST00000423636 PMCHP20382 165 aa9.46□□□□□ -0.9
PTPRN-204ENST00000423636 TMEM167BQ9NRX6 74 aa9.46□□□□□ -0.9
PTPRN-204ENST00000423636 DPM3Q9P2X0 92 aa9.46□□□□□ -0.9
PTPRN-204ENST00000423636 SERF1AO75920 110 aa9.45□□□□□ -0.9
PTPRN-204ENST00000423636 IGLV2-8P01709 118 aa9.45□□□□□ -0.9
PTPRN-204ENST00000423636 HIST1H1BP16401 226 aaKnown RBP9.45□□□□□ -0.9
PTPRN-204ENST00000423636 NTF3P20783 257 aa9.45□□□□□ -0.9
PTPRN-204ENST00000423636 LGALS7P47929 136 aa9.45□□□□□ -0.9
PTPRN-204ENST00000423636 TPTE2P1Q5T6R2 138 aa9.45□□□□□ -0.9
PTPRN-204ENST00000423636 GOLT1AQ6ZVE7 132 aa9.45□□□□□ -0.9
PTPRN-204ENST00000423636 PRNTQ86SH4 94 aa9.45□□□□□ -0.9
PTPRN-204ENST00000423636 TMEM183AQ8IXX5 376 aa9.45□□□□□ -0.9
PTPRN-204ENST00000423636 RASL11BQ9BPW5 248 aa9.45□□□□□ -0.9
PTPRN-204ENST00000423636 TMUB1Q9BVT8 246 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms