RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 WI2-2373I1.2A0A1W2PRP0 233 aa10.66□□□□□ -0.7
SEC13-203ENST00000383801 H3BUA1 57 aa10.66□□□□□ -0.7
SEC13-203ENST00000383801 ATP6V0E1O15342 81 aa10.66□□□□□ -0.7
SEC13-203ENST00000383801 NPPCP23582 126 aa10.66□□□□□ -0.7
SEC13-203ENST00000383801 UBE2L3P68036 154 aaKnown RBP10.66□□□□□ -0.7
SEC13-203ENST00000383801 ZNF674Q2M3X9 581 aa10.66□□□□□ -0.7
SEC13-203ENST00000383801 KLF17Q5JT82 389 aaPredicted RBP10.66□□□□□ -0.7
SEC13-203ENST00000383801 ZNF343Q6P1L6 599 aa10.66□□□□□ -0.7
SEC13-203ENST00000383801 BRD3OSQ6XYD6 125 aa10.66□□□□□ -0.7
SEC13-203ENST00000383801 C19orf35Q6ZS72 473 aa10.66□□□□□ -0.7
SEC13-203ENST00000383801 C9orf139Q6ZV77 190 aa10.66□□□□□ -0.7
SEC13-203ENST00000383801 ABCA2Q9BZC7 2435 aa10.66□□□□□ -0.7
SEC13-203ENST00000383801 KMT2BQ9UMN6 2715 aaPredicted RBP10.66□□□□□ -0.7
SEC13-203ENST00000383801 MED13LQ71F56 2210 aa10.65□□□□□ -0.7
SEC13-203ENST00000383801 TRBV7-1A0A0A6YYK4 115 aa10.65□□□□□ -0.7
SEC13-203ENST00000383801 TGOLN2O43493 480 aa10.65□□□□□ -0.7
SEC13-203ENST00000383801 TGFAP01135 160 aa10.65□□□□□ -0.7
SEC13-203ENST00000383801 IGHG2P01859 326 aa10.65□□□□□ -0.7
SEC13-203ENST00000383801 TIGITQ495A1 244 aa10.65□□□□□ -0.7
SEC13-203ENST00000383801 Q5PR19 223 aa10.65□□□□□ -0.7
SEC13-203ENST00000383801 ZNF491Q8N8L2 437 aa10.65□□□□□ -0.7
SEC13-203ENST00000383801 OR5T1Q8NG75 326 aa10.65□□□□□ -0.7
SEC13-203ENST00000383801 BTF3L4Q96K17 158 aa10.65□□□□□ -0.7
SEC13-203ENST00000383801 SLC25A39Q9BZJ4 359 aaPredicted RBP10.65□□□□□ -0.7
SEC13-203ENST00000383801 FBXL7Q9UJT9 491 aa10.65□□□□□ -0.7
SEC13-203ENST00000383801 IGHV3-21A0A0B4J1V1 117 aa10.64□□□□□ -0.71
SEC13-203ENST00000383801 HELTA6NFD8 242 aa10.64□□□□□ -0.71
SEC13-203ENST00000383801 NDUFB8O95169 186 aa10.64□□□□□ -0.71
SEC13-203ENST00000383801 RAB9AP51151 201 aa10.64□□□□□ -0.71
SEC13-203ENST00000383801 TAS2R60P59551 318 aa10.64□□□□□ -0.71
SEC13-203ENST00000383801 KRTAP10-9P60411 292 aa10.64□□□□□ -0.71
SEC13-203ENST00000383801 C19orf54Q5BKX5 351 aa10.64□□□□□ -0.71
SEC13-203ENST00000383801 OR5R1Q8NH85 324 aa10.64□□□□□ -0.71
SEC13-203ENST00000383801 HIST1H2BAQ96A08 127 aa10.64□□□□□ -0.71
SEC13-203ENST00000383801 FXYD5Q96DB9 178 aa10.64□□□□□ -0.71
SEC13-203ENST00000383801 YPEL4Q96NS1 127 aa10.64□□□□□ -0.71
SEC13-203ENST00000383801 IMMP2LQ96T52 175 aa10.64□□□□□ -0.71
SEC13-203ENST00000383801 TRAV5A0A0B4J249 113 aa10.63□□□□□ -0.71
SEC13-203ENST00000383801 FAM223BA6NKX1 122 aa10.63□□□□□ -0.71
SEC13-203ENST00000383801 OR2J3O76001 311 aa10.63□□□□□ -0.71
SEC13-203ENST00000383801 AVPP01185 164 aa10.63□□□□□ -0.71
SEC13-203ENST00000383801 AMY1AP04745 511 aa10.63□□□□□ -0.71
SEC13-203ENST00000383801 S100A9P06702 114 aaKnown RBP10.63□□□□□ -0.71
SEC13-203ENST00000383801 NBEAP1P0C6P0 100 aa10.63□□□□□ -0.71
SEC13-203ENST00000383801 IGHV4-31P0DP07 118 aa10.63□□□□□ -0.71
SEC13-203ENST00000383801 COL8A1P27658 744 aa10.63□□□□□ -0.71
SEC13-203ENST00000383801 LYZP61626 148 aa10.63□□□□□ -0.71
SEC13-203ENST00000383801 SUMO1P63165 101 aaKnown RBP10.63□□□□□ -0.71
SEC13-203ENST00000383801 ADIRFQ15847 76 aa10.63□□□□□ -0.71
SEC13-203ENST00000383801 Q56UQ5 140 aa10.63□□□□□ -0.71
SEC13-203ENST00000383801 LINC01551Q86U37 167 aa10.63□□□□□ -0.71
SEC13-203ENST00000383801 BPIFA4PQ86YQ2 179 aa10.63□□□□□ -0.71
SEC13-203ENST00000383801 FAM223AQ8IWN6 122 aa10.63□□□□□ -0.71
SEC13-203ENST00000383801 LYPD1Q8N2G4 141 aa10.63□□□□□ -0.71
SEC13-203ENST00000383801 RNF125Q96EQ8 232 aa10.63□□□□□ -0.71
SEC13-203ENST00000383801 SHANK2-AS3Q9BTD1 123 aa10.63□□□□□ -0.71
SEC13-203ENST00000383801 FAM208BQ5VWN6 2430 aa10.63□□□□□ -0.71
SEC13-203ENST00000383801 IGHV3OR16-10A0A075B7F0 116 aa10.62□□□□□ -0.71
SEC13-203ENST00000383801 TRAV41A0A0B4J266 112 aa10.62□□□□□ -0.71
SEC13-203ENST00000383801 SCO2A0A1W2PP80 73 aa10.62□□□□□ -0.71
SEC13-203ENST00000383801 RNF223E7ERA6 249 aa10.62□□□□□ -0.71
SEC13-203ENST00000383801 F8W735 103 aaPredicted RBP10.62□□□□□ -0.71
SEC13-203ENST00000383801 H3BRN7 92 aa10.62□□□□□ -0.71
SEC13-203ENST00000383801 H3BUX3 64 aa10.62□□□□□ -0.71
SEC13-203ENST00000383801 FSHBP01225 129 aa10.62□□□□□ -0.71
SEC13-203ENST00000383801 OR10J4P0C629 311 aa10.62□□□□□ -0.71
SEC13-203ENST00000383801 HIST1H1EP10412 219 aaKnown RBP10.62□□□□□ -0.71
SEC13-203ENST00000383801 ATF4P18848 351 aaPredicted RBP10.62□□□□□ -0.71
SEC13-203ENST00000383801 MYCNOSP40205 109 aa10.62□□□□□ -0.71
SEC13-203ENST00000383801 AKR1C3P42330 323 aa10.62□□□□□ -0.71
SEC13-203ENST00000383801 FLI1Q01543 452 aaPredicted RBP10.62□□□□□ -0.71
SEC13-203ENST00000383801 ELOBQ15370 118 aa10.62□□□□□ -0.71
SEC13-203ENST00000383801 MORN5Q5VZ52 161 aa10.62□□□□□ -0.71
SEC13-203ENST00000383801 CYB5R2Q6BCY4 276 aa10.62□□□□□ -0.71
SEC13-203ENST00000383801 C1QL4Q86Z23 238 aa10.62□□□□□ -0.71
SEC13-203ENST00000383801 ZNF502Q8TBZ5 544 aa10.62□□□□□ -0.71
SEC13-203ENST00000383801 C2CD4CQ8TF44 421 aa10.62□□□□□ -0.71
SEC13-203ENST00000383801 EEF1AKMT3Q96AZ1 226 aa10.62□□□□□ -0.71
SEC13-203ENST00000383801 SMIM12Q96EX1 92 aa10.62□□□□□ -0.71
SEC13-203ENST00000383801 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.62□□□□□ -0.719e-8■■□□□ 13.1
SEC13-203ENST00000383801 TACC2O95359 2948 aa10.62□□□□□ -0.71
SEC13-203ENST00000383801 SPG11Q96JI7 2443 aa10.62□□□□□ -0.71
SEC13-203ENST00000383801 TRBV24-1A0A075B6N3 115 aa10.61□□□□□ -0.71
SEC13-203ENST00000383801 CTSGP08311 255 aa10.61□□□□□ -0.71
SEC13-203ENST00000383801 GP9P14770 177 aa10.61□□□□□ -0.71
SEC13-203ENST00000383801 RAB5AP20339 215 aa10.61□□□□□ -0.71
SEC13-203ENST00000383801 S100PP25815 95 aa10.61□□□□□ -0.71
SEC13-203ENST00000383801 ECSCRQ19T08 205 aa10.61□□□□□ -0.71
SEC13-203ENST00000383801 FAM209BQ5JX69 171 aa10.61□□□□□ -0.71
SEC13-203ENST00000383801 ZNF600Q6ZNG1 722 aa10.61□□□□□ -0.71
SEC13-203ENST00000383801 FAM24BQ8N5W8 94 aa10.61□□□□□ -0.71
SEC13-203ENST00000383801 ARL6IP6Q8N6S5 226 aa10.61□□□□□ -0.71
SEC13-203ENST00000383801 ISOC2Q96AB3 205 aa10.61□□□□□ -0.71
SEC13-203ENST00000383801 USMG5Q96IX5 58 aa10.61□□□□□ -0.71
SEC13-203ENST00000383801 PRDM13Q9H4Q3 707 aa10.61□□□□□ -0.71
SEC13-203ENST00000383801 LRRK2Q5S007 2527 aa10.61□□□□□ -0.71
SEC13-203ENST00000383801 GGTLC3B5MD39 225 aa10.61□□□□□ -0.71
SEC13-203ENST00000383801 H7BYZ3 331 aa10.61□□□□□ -0.71
SEC13-203ENST00000383801 AP4M1O00189 453 aa10.61□□□□□ -0.71
SEC13-203ENST00000383801 IL4P05112 153 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms