RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 RTBDNQ9BSG5 229 aaPredicted RBP4.34□□□□□ -1.71
SSX1-201ENST00000376919 NUDT15Q9NV35 164 aa4.34□□□□□ -1.71
SSX1-201ENST00000376919 THYN1Q9P016 225 aa4.34□□□□□ -1.71
SSX1-201ENST00000376919 ZNF257Q9Y2Q1 563 aa4.34□□□□□ -1.71
SSX1-201ENST00000376919 PLXNB1O43157 2135 aa4.34□□□□□ -1.71
SSX1-201ENST00000376919 NBEAL1Q6ZS30 2694 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 MGAM2Q2M2H8 2515 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 A0A1W2PS18 150 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 FAM223BA6NKX1 122 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 OR2J3O76001 311 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 SFT2D2O95562 160 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 IFNA21P01568 189 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 LGALS1P09382 135 aaKnown RBP4.33□□□□□ -1.72
SSX1-201ENST00000376919 OR8U8P0C7N1 319 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 FRMD6-AS1P0C7T7 363 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 SULT1A3P0DMM9 295 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 SULT1A4P0DMN0 295 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 OR13C7P0DN81 318 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 HIST1H1BP16401 226 aaKnown RBP4.33□□□□□ -1.72
SSX1-201ENST00000376919 PSMB8P28062 276 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 PSMB6P28072 239 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 SNCAP37840 140 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 CRIP2P52943 208 aaPredicted RBP4.33□□□□□ -1.72
SSX1-201ENST00000376919 UBE2MP61081 183 aaKnown RBP4.33□□□□□ -1.72
SSX1-201ENST00000376919 RHOGP84095 191 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 ATP5G2Q06055 141 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 PPP1R1AQ13522 171 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 IZUMO4Q1ZYL8 232 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 PLET1Q6UQ28 207 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 FAM223AQ8IWN6 122 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 UBAC2Q8NBM4 344 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 OR11H1Q8NG94 326 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 IL22RA2Q969J5 263 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 TMEM230Q96A57 120 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 EEF1AKMT3Q96AZ1 226 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 SEC22AQ96IW7 307 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 UBE2E2Q96LR5 201 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 KRTAP4-5Q9BYR2 181 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 GNB4Q9HAV0 340 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 CACNG5Q9UF02 275 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 PAIP2BQ9ULR5 123 aaKnown RBP4.33□□□□□ -1.72
SSX1-201ENST00000376919 FLVCR2Q9UPI3 526 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 NUBP2Q9Y5Y2 271 aa4.33□□□□□ -1.72
SSX1-201ENST00000376919 VWFP04275 2813 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 PKD1L1Q8TDX9 2849 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 A0A0B4J2A0 478 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 TEX50A0A1B0GTY4 177 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 DUXBA0A1W2PPF3 345 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 LINC01619G3V211 115 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 SOX15O60248 233 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 CDS2O95674 445 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 TOMM40O96008 361 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 IGKV1-39P01597 117 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 IGKV1-5P01602 117 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 IGHV3-23P01764 117 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 IGKV1D-39P04432 117 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 TCRBP04435 133 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 OR4E1P0C645 316 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 C4BPBP20851 252 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 MYCNOSP40205 109 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 SUB1P53999 127 aaKnown RBP eCLIP4.32□□□□□ -1.726e-22■■■■□ 24.8
SSX1-201ENST00000376919 HSPE1P61604 102 aaKnown RBP4.32□□□□□ -1.72
SSX1-201ENST00000376919 SSBP2P81877 361 aaPredicted RBP4.32□□□□□ -1.72
SSX1-201ENST00000376919 PRCDQ00LT1 54 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 ZNF616Q08AN1 781 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 ASAH1Q13510 395 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 TMEM187Q14656 261 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 SMCO1Q147U7 214 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 TWIST1Q15672 202 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 RPEL1Q2QD12 228 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 C15orf32Q32M92 178 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 KRTAP15-1Q3LI76 137 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 Q56UQ5 140 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 TCTEX1D4Q5JR98 221 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 C18orf65Q6ZTR6 163 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 LYG2Q86SG7 212 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 SELENOHQ8IZQ5 122 aaKnown RBP4.32□□□□□ -1.72
SSX1-201ENST00000376919 TTC9CQ8N5M4 171 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 ZNF491Q8N8L2 437 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 NRACQ8N912 160 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 NECAP1Q8NC96 275 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 STXBP6Q8NFX7 210 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 OR10W1Q8NGF6 305 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 OR1L6Q8NGR2 347 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 OR1N2Q8NGR9 330 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 LHFPL5Q8TAF8 219 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 GLYATL2Q8WU03 294 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 GALNT14Q96FL9 552 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 USMG5Q96IX5 58 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 P2RX4Q99571 388 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 KRTAP4-11Q9BYQ6 195 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 ALX4Q9H161 411 aaPredicted RBP4.32□□□□□ -1.72
SSX1-201ENST00000376919 HIPK2Q9H2X6 1198 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.32□□□□□ -1.72
SSX1-201ENST00000376919 TMEM14BQ9NUH8 114 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 CACFD1Q9UGQ2 172 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 SHPKQ9UHJ6 478 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 S4R3C0 116 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 ANK2Q01484 3957 aa4.32□□□□□ -1.72
SSX1-201ENST00000376919 NOTCH3Q9UM47 2321 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms