RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 OBSCN-AS1Q96MR7 158 aa0.47□□□□□ -2.33
RNU4-56P-201ENST00000364700 SERPINI1Q99574 410 aa0.47□□□□□ -2.33
RNU4-56P-201ENST00000364700 SIGMAR1Q99720 223 aa0.47□□□□□ -2.33
RNU4-56P-201ENST00000364700 CMSS1Q9BQ75 279 aaKnown RBP0.47□□□□□ -2.33
RNU4-56P-201ENST00000364700 OR5AC2Q9NZP5 309 aa0.47□□□□□ -2.33
RNU4-56P-201ENST00000364700 MYO5AQ9Y4I1 1855 aaKnown RBP0.47□□□□□ -2.33
RNU4-56P-201ENST00000364700 MED12Q93074 2177 aa0.47□□□□□ -2.33
RNU4-56P-201ENST00000364700 SIP14410 1827 aa0.47□□□□□ -2.33
RNU4-56P-201ENST00000364700 TET1Q8NFU7 2136 aa0.47□□□□□ -2.33
RNU4-56P-201ENST00000364700 CITO14578 2027 aa0.47□□□□□ -2.33
RNU4-56P-201ENST00000364700 RTL1A6NKG5 1358 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 A0A087X0T9 212 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 TRAV14DV4A0A0A6YYC5 116 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 FUOMA2VDF0 154 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 B4DSR2 109 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 GEMIN2O14893 280 aaKnown RBP0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 UBL3O95164 117 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 HSD11B1P28845 292 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 CASP1P29466 404 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 ATP5G3P48201 142 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 SERPINB9P50453 376 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 DEFA3P59666 94 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 YPEL3P61236 119 aaPredicted RBP0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 RHOGP84095 191 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 RNASE10Q5GAN6 216 aaKnown RBP0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 KRTAP26-1Q6PEX3 210 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 DPPA3Q6W0C5 159 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 OR10X1Q8NGY0 326 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 STAG3L4Q8TBR4 150 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 ITFG2Q969R8 447 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 PPP1R14BQ96C90 147 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 GPR146Q96CH1 333 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 CCDC90BQ9GZT6 254 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 TVP23BQ9NYZ1 205 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 COL1A1P02452 1464 aaPredicted RBP0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 MYLKQ15746 1914 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 FMN1Q68DA7 1419 aa0.46□□□□□ -2.34
RNU4-56P-201ENST00000364700 ZNF462Q96JM2 2506 aa0.45□□□□□ -2.34
RNU4-56P-201ENST00000364700 FANCMQ8IYD8 2048 aa0.45□□□□□ -2.34
RNU4-56P-201ENST00000364700 ZDBF2Q9HCK1 2354 aa0.45□□□□□ -2.34
RNU4-56P-201ENST00000364700 TRBV19A0A075B6N1 114 aa0.45□□□□□ -2.34
RNU4-56P-201ENST00000364700 A0A087WX48 190 aa0.45□□□□□ -2.34
RNU4-56P-201ENST00000364700 TRAV3A0A0B4J244 114 aa0.45□□□□□ -2.34
RNU4-56P-201ENST00000364700 C7orf71A4D174 169 aa0.45□□□□□ -2.34
RNU4-56P-201ENST00000364700 CLDN25C9JDP6 229 aa0.45□□□□□ -2.34
RNU4-56P-201ENST00000364700 M0R378 163 aa0.45□□□□□ -2.34
RNU4-56P-201ENST00000364700 SMIM17P0DL12 118 aa0.45□□□□□ -2.34
RNU4-56P-201ENST00000364700 BRS3P32247 399 aa0.45□□□□□ -2.34
RNU4-56P-201ENST00000364700 ZNF93P35789 620 aaPredicted RBP0.45□□□□□ -2.34
RNU4-56P-201ENST00000364700 RAB4BP61018 213 aa0.45□□□□□ -2.34
RNU4-56P-201ENST00000364700 DYNLT1P63172 113 aa0.45□□□□□ -2.34
RNU4-56P-201ENST00000364700 ESRGQ1W209 222 aa0.45□□□□□ -2.34
RNU4-56P-201ENST00000364700 AKIRIN2Q53H80 203 aa0.45□□□□□ -2.34
RNU4-56P-201ENST00000364700 TRAPPC6BQ86SZ2 158 aa0.45□□□□□ -2.34
RNU4-56P-201ENST00000364700 KRT222Q8N1A0 295 aa0.45□□□□□ -2.34
RNU4-56P-201ENST00000364700 GINS4Q9BRT9 223 aa0.45□□□□□ -2.34
RNU4-56P-201ENST00000364700 E9PCH4 1651 aa0.45□□□□□ -2.34
RNU4-56P-201ENST00000364700 MGST1P10620 155 aaKnown RBP0.44□□□□□ -2.34
RNU4-56P-201ENST00000364700 PIGPP57054 158 aa0.44□□□□□ -2.34
RNU4-56P-201ENST00000364700 ROMO1P60602 79 aa0.44□□□□□ -2.34
RNU4-56P-201ENST00000364700 HSPE1P61604 102 aaKnown RBP0.44□□□□□ -2.34
RNU4-56P-201ENST00000364700 RRN3P1Q2M238 152 aa0.44□□□□□ -2.34
RNU4-56P-201ENST00000364700 BRMS1LQ5PSV4 323 aa0.44□□□□□ -2.34
RNU4-56P-201ENST00000364700 S100A7AQ86SG5 101 aa0.44□□□□□ -2.34
RNU4-56P-201ENST00000364700 EXOC3-AS1Q8N2X6 119 aa0.44□□□□□ -2.34
RNU4-56P-201ENST00000364700 SFT2D1Q8WV19 159 aa0.44□□□□□ -2.34
RNU4-56P-201ENST00000364700 PATE1Q8WXA2 126 aa0.44□□□□□ -2.34
RNU4-56P-201ENST00000364700 LINC00526Q96FQ7 95 aa0.44□□□□□ -2.34
RNU4-56P-201ENST00000364700 HIST1H2BLQ99880 126 aa0.44□□□□□ -2.34
RNU4-56P-201ENST00000364700 BCL2L10Q9HD36 194 aa0.44□□□□□ -2.34
RNU4-56P-201ENST00000364700 ARMC1Q9NVT9 282 aa0.44□□□□□ -2.34
RNU4-56P-201ENST00000364700 NHP2Q9NX24 153 aaKnown RBP0.44□□□□□ -2.34
RNU4-56P-201ENST00000364700 ZFP30Q9Y2G7 519 aa0.44□□□□□ -2.34
RNU4-56P-201ENST00000364700 ZGRF1Q86YA3 2104 aa0.44□□□□□ -2.34
RNU4-56P-201ENST00000364700 PEAK1Q9H792 1746 aa0.44□□□□□ -2.34
RNU4-56P-201ENST00000364700 TRPM1Q7Z4N2 1603 aa0.43□□□□□ -2.34
RNU4-56P-201ENST00000364700 PHRF1Q9P1Y6 1649 aaKnown RBP0.43□□□□□ -2.34
RNU4-56P-201ENST00000364700 N4BP2Q86UW6 1770 aaPredicted RBP0.43□□□□□ -2.34
RNU4-56P-201ENST00000364700 TRBV6-8A0A0A6YYG3 113 aa0.43□□□□□ -2.34
RNU4-56P-201ENST00000364700 HYPMO75409 117 aa0.43□□□□□ -2.34
RNU4-56P-201ENST00000364700 S100A4P26447 101 aaKnown RBP0.43□□□□□ -2.34
RNU4-56P-201ENST00000364700 REEP5Q00765 189 aa0.43□□□□□ -2.34
RNU4-56P-201ENST00000364700 LIN52Q52LA3 116 aa0.43□□□□□ -2.34
RNU4-56P-201ENST00000364700 DHRS4L2Q6PKH6 230 aa0.43□□□□□ -2.34
RNU4-56P-201ENST00000364700 PATE2Q6UY27 113 aa0.43□□□□□ -2.34
RNU4-56P-201ENST00000364700 GOLT1AQ6ZVE7 132 aa0.43□□□□□ -2.34
RNU4-56P-201ENST00000364700 Q8N814 137 aa0.43□□□□□ -2.34
RNU4-56P-201ENST00000364700 DGCR14Q96DF8 476 aaKnown RBP0.43□□□□□ -2.34
RNU4-56P-201ENST00000364700 PRADC1Q9BSG0 188 aa0.43□□□□□ -2.34
RNU4-56P-201ENST00000364700 NMNAT1Q9HAN9 279 aaPredicted RBP0.43□□□□□ -2.34
RNU4-56P-201ENST00000364700 UTP11Q9Y3A2 253 aaKnown RBP0.43□□□□□ -2.34
RNU4-56P-201ENST00000364700 APCP25054 2843 aa0.42□□□□□ -2.34
RNU4-56P-201ENST00000364700 COL24A1Q17RW2 1714 aa0.42□□□□□ -2.34
RNU4-56P-201ENST00000364700 FRAS1Q86XX4 4008 aa0.42□□□□□ -2.34
RNU4-56P-201ENST00000364700 C1orf196B1AJZ1 125 aa0.42□□□□□ -2.34
RNU4-56P-201ENST00000364700 ZNF736B4DX44 427 aaPredicted RBP0.42□□□□□ -2.34
RNU4-56P-201ENST00000364700 CYB5BO43169 146 aa0.42□□□□□ -2.34
RNU4-56P-201ENST00000364700 SERPINA1P01009 418 aa0.42□□□□□ -2.34
RNU4-56P-201ENST00000364700 IGLV1-51P01701 117 aa0.42□□□□□ -2.34
RNU4-56P-201ENST00000364700 SPTBP11277 2137 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms