RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 INAFM2P0DMQ5 153 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 RNASE13Q5GAN3 156 aaKnown RBP4.79□□□□□ -1.64
BRCA1-203ENST00000357654 Q8TAT8 98 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 RHPN1-AS1Q9BWJ2 59 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 CIARTQ8N365 385 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-203ENST00000357654 ZNRF2Q8NHG8 242 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 A0A096LNI7 61 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 TMEM238C9JI98 176 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 LAGE3Q14657 143 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 Q6ZNX1 250 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 OR10W1Q8NGF6 305 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 ZNF479Q96JC4 524 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 LINC00312Q9Y6C7 94 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-203ENST00000357654 A0A1B0GV90 55 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 A8MWV9 139 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 IGKV4-1P06312 121 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 WFDC11Q8NEX6 87 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 PIFOQ8TCI5 191 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 IGHV2-26A0A0B4J1V2 119 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 PRSS23O95084 383 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 HOXB1P14653 301 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-203ENST00000357654 ATP5G3P48201 142 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 FOXF2Q12947 444 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 WDYHV1Q96HA8 205 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 TIMM21Q9BVV7 248 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 SHROOM3Q8TF72 1996 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 MSMBP08118 114 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 TMEM170AQ8WVE7 144 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 GATA6Q92908 595 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 PSG8Q9UQ74 426 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 MYH15Q9Y2K3 1946 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 AHDC1Q5TGY3 1603 aaPredicted RBP4.78□□□□□ -1.64
BRCA1-203ENST00000357654 PTPRZ1P23471 2315 aaPredicted RBP4.78□□□□□ -1.64
BRCA1-203ENST00000357654 C12orf77C9JDV5 145 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 LY6G6CO95867 125 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 ASPHD2Q6ICH7 369 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 EXOC3-AS1Q8N2X6 119 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 LYPD6BQ8NI32 183 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 SIGMAR1Q99720 223 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 A0A1B0GUS0 222 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 TRACP01848 142 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 CHCHD1Q96BP2 118 aaKnown RBP4.78□□□□□ -1.64
BRCA1-203ENST00000357654 C8orf49Q96NF6 230 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 NOP10Q9NPE3 64 aaKnown RBP4.78□□□□□ -1.64
BRCA1-203ENST00000357654 SPRR3Q9UBC9 169 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 LRP6O75581 1613 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 IGHG4P01861 327 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 AQP3Q92482 292 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 DOT1LQ8TEK3 1739 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 TRAV5A0A0B4J249 113 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 IGHV1-18A0A0C4DH31 117 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 IGKV2-24A0A0C4DH68 120 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 MYMXA0A1B0GTQ4 84 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 RNASE2P10153 161 aaKnown RBP4.78□□□□□ -1.64
BRCA1-203ENST00000357654 COL8A2P25067 703 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 SAA4P35542 130 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 TCF15Q12870 199 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 Q8NFD4 153 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 A0A0G2JNJ9 132 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 SOCS3O14543 225 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 NDUFB1O75438 58 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 SEM1Q6ZVN7 128 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 Q9UFV3 132 aa4.78□□□□□ -1.64
BRCA1-203ENST00000357654 A8MWP6 167 aa4.77□□□□□ -1.65
BRCA1-203ENST00000357654 SLC25A47Q6Q0C1 308 aa4.77□□□□□ -1.65
BRCA1-203ENST00000357654 CACNA1SQ13698 1873 aa4.77□□□□□ -1.65
BRCA1-203ENST00000357654 hDV102S1A0JD36 115 aa4.77□□□□□ -1.65
BRCA1-203ENST00000357654 C5orf67F2Z3F1 127 aa4.77□□□□□ -1.65
BRCA1-203ENST00000357654 COX5BP10606 129 aa4.77□□□□□ -1.65
BRCA1-203ENST00000357654 ZFAND6Q6FIF0 208 aa4.77□□□□□ -1.65
BRCA1-203ENST00000357654 NEGR1Q7Z3B1 354 aa4.77□□□□□ -1.65
BRCA1-203ENST00000357654 PILRAQ9UKJ1 303 aa4.77□□□□□ -1.65
BRCA1-203ENST00000357654 PLA2G1BP04054 148 aaKnown RBP4.77□□□□□ -1.65
BRCA1-203ENST00000357654 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-203ENST00000357654 RIPPLY2Q5TAB7 128 aa4.77□□□□□ -1.65
BRCA1-203ENST00000357654 PVRIGQ6DKI7 326 aa4.77□□□□□ -1.65
BRCA1-203ENST00000357654 MRPL52Q86TS9 123 aaKnown RBP4.77□□□□□ -1.65
BRCA1-203ENST00000357654 PMS2P5A8MQ11 134 aa4.77□□□□□ -1.65
BRCA1-203ENST00000357654 SMKR1H3BMG3 65 aa4.77□□□□□ -1.65
BRCA1-203ENST00000357654 THSD7AQ9UPZ6 1657 aa4.77□□□□□ -1.65
BRCA1-203ENST00000357654 ARFGEF2Q9Y6D5 1785 aa4.77□□□□□ -1.65
BRCA1-203ENST00000357654 RND3P61587 244 aa4.77□□□□□ -1.65
BRCA1-203ENST00000357654 DEFB136Q30KP8 78 aa4.77□□□□□ -1.65
BRCA1-203ENST00000357654 ZNF638Q14966 1978 aaKnown RBP4.77□□□□□ -1.65
BRCA1-203ENST00000357654 RGPD2P0DJD1 1756 aa4.77□□□□□ -1.65
BRCA1-203ENST00000357654 TRBV7-1A0A0A6YYK4 115 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 A0A1W2PPC1 479 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 NPBQ8NG41 125 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 TTC3P53804 2025 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 IGHV1-46P01743 117 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 XAF1Q6GPH4 301 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 TMEM243Q9BU79 118 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 LHFPL6Q9Y693 200 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 IGHV4-59P01825 116 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 C10orf55Q5SWW7 151 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 TMEM200BQ69YZ2 307 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 COL4A1P02462 1669 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 FAM236DA0A1B0GTK5 79 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 FAM236CP0DP71 79 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms