RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 TSSC4Q9Y5U2 329 aaPredicted RBP16.75■□□□□ 0.27
SPNS1-203ENST00000334536 SPAARA0A1B0GVQ0 90 aa16.75■□□□□ 0.27
SPNS1-203ENST00000334536 PRSS46E5RG02 174 aa16.75■□□□□ 0.27
SPNS1-203ENST00000334536 IGLV2-8P01709 118 aa16.75■□□□□ 0.27
SPNS1-203ENST00000334536 TREML4Q6UXN2 200 aa16.75■□□□□ 0.27
SPNS1-203ENST00000334536 MOGAT3Q86VF5 341 aa16.75■□□□□ 0.27
SPNS1-203ENST00000334536 OR4X2Q8NGF9 303 aa16.75■□□□□ 0.27
SPNS1-203ENST00000334536 SIGLEC8Q9NYZ4 499 aa16.75■□□□□ 0.27
SPNS1-203ENST00000334536 CACNA1DQ01668 2161 aa16.75■□□□□ 0.27
SPNS1-203ENST00000334536 IGHV3OR15-7A0A075B7D8 119 aa16.74■□□□□ 0.27
SPNS1-203ENST00000334536 MFAP2P55001 183 aa16.74■□□□□ 0.27
SPNS1-203ENST00000334536 RPL39P5Q59GN2 51 aa16.74■□□□□ 0.27
SPNS1-203ENST00000334536 MGST2Q99735 147 aa16.74■□□□□ 0.27
SPNS1-203ENST00000334536 GEMIN7Q9H840 131 aaKnown RBP16.74■□□□□ 0.27
SPNS1-203ENST00000334536 TMEM140Q9NV12 185 aa16.74■□□□□ 0.27
SPNS1-203ENST00000334536 MUC6Q6W4X9 2439 aa16.74■□□□□ 0.27
SPNS1-203ENST00000334536 M0R1B8 84 aa16.74■□□□□ 0.27
SPNS1-203ENST00000334536 GFRA3O60609 400 aa16.74■□□□□ 0.27
SPNS1-203ENST00000334536 GATA4P43694 442 aa16.74■□□□□ 0.27
SPNS1-203ENST00000334536 ZNF134P52741 427 aa16.74■□□□□ 0.27
SPNS1-203ENST00000334536 PERPQ96FX8 193 aa16.74■□□□□ 0.27
SPNS1-203ENST00000334536 IGLV3-9A0A075B6K5 115 aa16.73■□□□□ 0.27
SPNS1-203ENST00000334536 ADTRPQ96IZ2 230 aa16.73■□□□□ 0.27
SPNS1-203ENST00000334536 ZNF479Q96JC4 524 aa16.73■□□□□ 0.27
SPNS1-203ENST00000334536 SERTAD4Q9NUC0 356 aa16.73■□□□□ 0.27
SPNS1-203ENST00000334536 MRPL16Q9NX20 251 aaKnown RBP16.73■□□□□ 0.27
SPNS1-203ENST00000334536 TCF19Q9Y242 345 aa16.73■□□□□ 0.27
SPNS1-203ENST00000334536 SOX21Q9Y651 276 aaPredicted RBP16.73■□□□□ 0.27
SPNS1-203ENST00000334536 EFNB3Q15768 340 aa16.72■□□□□ 0.27
SPNS1-203ENST00000334536 GDF5OSQ5U4N7 250 aa16.72■□□□□ 0.27
SPNS1-203ENST00000334536 ZNRF1Q8ND25 227 aa16.72■□□□□ 0.27
SPNS1-203ENST00000334536 ZC2HC1AQ96GY0 325 aa16.72■□□□□ 0.27
SPNS1-203ENST00000334536 DIDO1Q9BTC0 2240 aaKnown RBP16.72■□□□□ 0.27
SPNS1-203ENST00000334536 A0A1B0GXF2 115 aa16.72■□□□□ 0.27
SPNS1-203ENST00000334536 MGST1P10620 155 aaKnown RBP16.72■□□□□ 0.27
SPNS1-203ENST00000334536 FGF6P10767 208 aa16.72■□□□□ 0.27
SPNS1-203ENST00000334536 NBL1P41271 181 aa16.72■□□□□ 0.27
SPNS1-203ENST00000334536 C17orf58Q2M2W7 97 aa16.72■□□□□ 0.27
SPNS1-203ENST00000334536 ZNF474Q6S9Z5 364 aaPredicted RBP16.72■□□□□ 0.27
SPNS1-203ENST00000334536 IGFL3Q6UXB1 125 aa16.72■□□□□ 0.27
SPNS1-203ENST00000334536 ITLN1Q8WWA0 313 aa16.72■□□□□ 0.27
SPNS1-203ENST00000334536 PLPPR2Q96GM1 343 aa16.72■□□□□ 0.27
SPNS1-203ENST00000334536 MS4A5Q9H3V2 200 aa16.72■□□□□ 0.27
SPNS1-203ENST00000334536 KBTBD11-OT1A0A1B0GTJ5 212 aa16.71■□□□□ 0.27
SPNS1-203ENST00000334536 C15orf61A6NNL5 157 aa16.71■□□□□ 0.27
SPNS1-203ENST00000334536 TMEM30BQ3MIR4 351 aa16.71■□□□□ 0.27
SPNS1-203ENST00000334536 MIC13Q5XKP0 118 aa16.71■□□□□ 0.27
SPNS1-203ENST00000334536 ZNF788Q6ZQV5 615 aa16.71■□□□□ 0.27
SPNS1-203ENST00000334536 FAM234AQ9H0X4 552 aa16.71■□□□□ 0.27
SPNS1-203ENST00000334536 FOXA2Q9Y261 457 aaPredicted RBP16.71■□□□□ 0.27
SPNS1-203ENST00000334536 ZNF292O60281 2723 aa16.71■□□□□ 0.27
SPNS1-203ENST00000334536 F8W1H4 67 aa16.7■□□□□ 0.26
SPNS1-203ENST00000334536 SPRNQ5BIV9 151 aa16.7■□□□□ 0.26
SPNS1-203ENST00000334536 RNF7Q9UBF6 113 aa16.7■□□□□ 0.26
SPNS1-203ENST00000334536 LSM4Q9Y4Z0 139 aaKnown RBP16.7■□□□□ 0.26
SPNS1-203ENST00000334536 TRAV3A0A0B4J244 114 aa16.7■□□□□ 0.26
SPNS1-203ENST00000334536 SPRY3O43610 288 aa16.7■□□□□ 0.26
SPNS1-203ENST00000334536 MEF2CQ06413 473 aaPredicted RBP16.7■□□□□ 0.26
SPNS1-203ENST00000334536 CT45A1Q5HYN5 189 aa16.7■□□□□ 0.26
SPNS1-203ENST00000334536 VKORC1L1Q8N0U8 176 aa16.7■□□□□ 0.26
SPNS1-203ENST00000334536 NUP35Q8NFH5 326 aa16.7■□□□□ 0.26
SPNS1-203ENST00000334536 CT45A3Q8NHU0 189 aa16.7■□□□□ 0.26
SPNS1-203ENST00000334536 DMXL1Q9Y485 3027 aa16.7■□□□□ 0.26
SPNS1-203ENST00000334536 A0A1W2PRE2 83 aa16.69■□□□□ 0.26
SPNS1-203ENST00000334536 UQCRFS1P47985 274 aa16.69■□□□□ 0.26
SPNS1-203ENST00000334536 HSPE1P61604 102 aaKnown RBP16.69■□□□□ 0.26
SPNS1-203ENST00000334536 POU2AF1Q16633 256 aa16.69■□□□□ 0.26
SPNS1-203ENST00000334536 BOD1L2Q8IYS8 172 aa16.69■□□□□ 0.26
SPNS1-203ENST00000334536 ABHD12Q8N2K0 398 aa16.69■□□□□ 0.26
SPNS1-203ENST00000334536 TEX45Q8NA69 505 aa16.69■□□□□ 0.26
SPNS1-203ENST00000334536 PGPEP1Q9NXJ5 209 aa16.69■□□□□ 0.26
SPNS1-203ENST00000334536 ZFHX2Q9C0A1 2572 aaPredicted RBP16.69■□□□□ 0.26
SPNS1-203ENST00000334536 URB1O60287 2271 aaKnown RBP16.69■□□□□ 0.26
SPNS1-203ENST00000334536 FNDC10F2Z333 226 aa16.69■□□□□ 0.26
SPNS1-203ENST00000334536 BLNKQ8WV28 456 aa16.69■□□□□ 0.26
SPNS1-203ENST00000334536 TMEM14BQ9NUH8 114 aa16.69■□□□□ 0.26
SPNS1-203ENST00000334536 RABAC1Q9UI14 185 aa16.69■□□□□ 0.26
SPNS1-203ENST00000334536 CRYGCP07315 174 aa16.68■□□□□ 0.26
SPNS1-203ENST00000334536 FAM87AP0C7U9 286 aa16.68■□□□□ 0.26
SPNS1-203ENST00000334536 LINC00574Q9H8X3 128 aa16.68■□□□□ 0.26
SPNS1-203ENST00000334536 ENY2Q9NPA8 101 aa16.68■□□□□ 0.26
SPNS1-203ENST00000334536 SPANXB1Q9NS25 103 aaPredicted RBP16.68■□□□□ 0.26
SPNS1-203ENST00000334536 INTS1Q8N201 2190 aaKnown RBP16.68■□□□□ 0.26
SPNS1-203ENST00000334536 RIF1Q5UIP0 2472 aaKnown RBP16.68■□□□□ 0.26
SPNS1-203ENST00000334536 CT45A6P0DMU7 189 aa16.67■□□□□ 0.26
SPNS1-203ENST00000334536 CT45A5P0DMU8 189 aa16.67■□□□□ 0.26
SPNS1-203ENST00000334536 CT45A7P0DMV0 189 aa16.67■□□□□ 0.26
SPNS1-203ENST00000334536 SAMD5Q5TGI4 173 aa16.67■□□□□ 0.26
SPNS1-203ENST00000334536 C1orf229Q6ZS94 237 aaPredicted RBP16.67■□□□□ 0.26
SPNS1-203ENST00000334536 IDI2-AS1Q9NZ38 188 aa16.67■□□□□ 0.26
SPNS1-203ENST00000334536 FAM215AQ9Y5M1 114 aa16.67■□□□□ 0.26
SPNS1-203ENST00000334536 CUL9Q8IWT3 2517 aa16.67■□□□□ 0.26
SPNS1-203ENST00000334536 A1L4Q6 167 aa16.67■□□□□ 0.26
SPNS1-203ENST00000334536 SAA2P0DJI9 122 aaPredicted RBP16.67■□□□□ 0.26
SPNS1-203ENST00000334536 ADAMTSL5Q6ZMM2 481 aa16.67■□□□□ 0.26
SPNS1-203ENST00000334536 LINC00173Q6ZV60 143 aa16.67■□□□□ 0.26
SPNS1-203ENST00000334536 ZNF418Q8TF45 676 aaPredicted RBP16.67■□□□□ 0.26
SPNS1-203ENST00000334536 HEATR1Q9H583 2144 aaKnown RBP16.66■□□□□ 0.26
SPNS1-203ENST00000334536 PRR14LQ5THK1 2151 aa16.66■□□□□ 0.26
SPNS1-203ENST00000334536 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms