RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 DOCK2Q92608 1830 aa7.19□□□□□ -1.26
SCUBE3-201ENST00000274938 SH2D1AO60880 128 aa7.19□□□□□ -1.26
SCUBE3-201ENST00000274938 NMSQ5H8A3 153 aa7.19□□□□□ -1.26
SCUBE3-201ENST00000274938 RCHY1Q96PM5 261 aa7.19□□□□□ -1.26
SCUBE3-201ENST00000274938 A0A0A6YYD4 124 aa7.19□□□□□ -1.26
SCUBE3-201ENST00000274938 LYPD3O95274 346 aa7.19□□□□□ -1.26
SCUBE3-201ENST00000274938 LYL1P12980 280 aa7.19□□□□□ -1.26
SCUBE3-201ENST00000274938 ZNF415Q09FC8 603 aa7.19□□□□□ -1.26
SCUBE3-201ENST00000274938 RPP25LQ8N5L8 163 aaKnown RBP7.19□□□□□ -1.26
SCUBE3-201ENST00000274938 ARID1AO14497 2285 aa7.19□□□□□ -1.26
SCUBE3-201ENST00000274938 ARAP2Q8WZ64 1704 aa7.19□□□□□ -1.26
SCUBE3-201ENST00000274938 A8MWP6 167 aa7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 DMRTC2Q8IXT2 367 aaPredicted RBP7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 TMEM158Q8WZ71 300 aa7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 PRR19A6NJB7 356 aa7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 RBMY1FQ15415 496 aaKnown RBP7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 IMMP1LQ96LU5 166 aa7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 GFI1Q99684 422 aa7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 RPUSD1Q9UJJ7 312 aaKnown RBP7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 PAPPAQ13219 1627 aa7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 SPATA31B1PQ5VZV4 182 aa7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 ANAPC10Q9UM13 185 aa7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 A0A087WX48 190 aa7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 FAM231BA6NCW3 169 aa7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 EREGO14944 169 aa7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 COL18A1P39060 1754 aa7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 IGKV2-40A0A087WW87 121 aaPredicted RBP7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 F8W1H4 67 aa7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 IGKV2D-40P01614 121 aaPredicted RBP7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 LCN12Q6JVE5 192 aa7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 LSM4Q9Y4Z0 139 aaKnown RBP7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 ZNF883P0CG24 379 aa7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 SELLP14151 372 aa7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 ERCC8Q13216 396 aa7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 SIGLEC12Q96PQ1 595 aa7.18□□□□□ -1.26
SCUBE3-201ENST00000274938 TRBV6-6A0A0A6YYG2 114 aa7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 WNT2P09544 360 aa7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 NUP205Q92621 2012 aa7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 BCORQ6W2J9 1755 aa7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 DIDO1Q9BTC0 2240 aaKnown RBP7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 IGKV1D-8A0A087WSZ0 117 aa7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 CELA3AP09093 270 aa7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 CRYGSP22914 178 aa7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 CSTL1Q9H114 145 aa7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 ZNF492Q9P255 531 aa7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 ZNF319Q9P2F9 582 aa7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 TRAV41A0A0B4J266 112 aa7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 C9orf118A6NHY6 69 aa7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 SUPT4H1P63272 117 aaKnown RBP7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 PMS2P5A8MQ11 134 aa7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 TMEM141Q96I45 108 aa7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 TIMM23O14925 209 aa7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 NPC2P61916 151 aa7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 C6orf226Q5I0X4 101 aa7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 RFNGQ9Y644 331 aa7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 DOCK1Q14185 1865 aa7.17□□□□□ -1.26
SCUBE3-201ENST00000274938 PRB4P10163 310 aaPredicted RBP7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 GAGE1Q13065 139 aa7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 RSPO4Q2I0M5 234 aaPredicted RBP7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 POLR3KQ9Y2Y1 108 aaPredicted RBP7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 MMP23AO75900 390 aa7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 RPL32P62910 135 aaKnown RBP7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 PRR31Q5SQ13 230 aa7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 IGLV3-12A0A075B6K2 115 aa7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 TRACP01848 142 aa7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 PRIMA1Q86XR5 153 aa7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 STRCQ7RTU9 1775 aa7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 TGFBR3LH3BV60 316 aa7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 K7EP34 96 aa7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 TIAF1O95411 115 aa7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 FOXF2Q12947 444 aa7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 FDCSPQ8NFU4 85 aa7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 ZNF837Q96EG3 531 aaPredicted RBP7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 SLAQ13239 276 aa7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 ATP1A1-AS1Q5TC04 95 aa7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 Q86TA4 180 aa7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 SCRT1Q9BWW7 348 aa7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 UBL5Q9BZL1 73 aa7.16□□□□□ -1.26
SCUBE3-201ENST00000274938 IL18BPO95998 194 aa7.15□□□□□ -1.26
SCUBE3-201ENST00000274938 SP9P0CG40 484 aa7.15□□□□□ -1.26
SCUBE3-201ENST00000274938 IFITM1P13164 125 aa7.15□□□□□ -1.26
SCUBE3-201ENST00000274938 MINOS1Q5TGZ0 78 aa7.15□□□□□ -1.26
SCUBE3-201ENST00000274938 Q6ZS49 121 aa7.15□□□□□ -1.26
SCUBE3-201ENST00000274938 RNASE6Q93091 150 aaKnown RBP7.15□□□□□ -1.26
SCUBE3-201ENST00000274938 MINOS1-NBL1R4GNA1 71 aa7.15□□□□□ -1.26
SCUBE3-201ENST00000274938 TAL2Q16559 108 aa7.15□□□□□ -1.26
SCUBE3-201ENST00000274938 EXOC3-AS1Q8N2X6 119 aa7.15□□□□□ -1.26
SCUBE3-201ENST00000274938 LOC102723996A0A087X1L8 192 aa7.15□□□□□ -1.26
SCUBE3-201ENST00000274938 TRBV7-1A0A0A6YYK4 115 aa7.15□□□□□ -1.26
SCUBE3-201ENST00000274938 INS-IGF2F8WCM5 200 aa7.15□□□□□ -1.26
SCUBE3-201ENST00000274938 INSP01308 110 aa7.15□□□□□ -1.26
SCUBE3-201ENST00000274938 IGKV1-5P01602 117 aa7.15□□□□□ -1.26
SCUBE3-201ENST00000274938 CELA3BP08861 270 aa7.15□□□□□ -1.26
SCUBE3-201ENST00000274938 OR11H6Q8NGC7 330 aa7.15□□□□□ -1.26
SCUBE3-201ENST00000274938 SRRM5B3KS81 715 aa7.15□□□□□ -1.27
SCUBE3-201ENST00000274938 MRPL14Q6P1L8 145 aaKnown RBP7.15□□□□□ -1.27
SCUBE3-201ENST00000274938 ZNF329Q86UD4 541 aa7.15□□□□□ -1.27
SCUBE3-201ENST00000274938 SRSF8Q9BRL6 282 aaKnown RBP7.15□□□□□ -1.27
SCUBE3-201ENST00000274938 THBDP07204 575 aa7.15□□□□□ -1.27
SCUBE3-201ENST00000274938 GAS1P54826 345 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms